RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 ZSCAN32Q9NX65 697 aa14.16□□□□□ -0.14
RNF40-208ENST00000565995 CCDC194A0A1B0GVG4 234 aa14.15□□□□□ -0.14
RNF40-208ENST00000565995 PRR5-ARHGAP8B1AHC4 643 aa14.15□□□□□ -0.14
RNF40-208ENST00000565995 EPB41L2O43491 1005 aaKnown RBP14.15□□□□□ -0.14
RNF40-208ENST00000565995 XYLBO75191 536 aa14.15□□□□□ -0.14
RNF40-208ENST00000565995 C8AP07357 584 aa14.15□□□□□ -0.14
RNF40-208ENST00000565995 XRCC6P12956 609 aaKnown RBP eCLIP14.15□□□□□ -0.14
RNF40-208ENST00000565995 GLRA2P23416 452 aa14.15□□□□□ -0.14
RNF40-208ENST00000565995 ATXN1P54253 815 aaKnown RBP14.15□□□□□ -0.14
RNF40-208ENST00000565995 NTHL1P78549 312 aa14.15□□□□□ -0.14
RNF40-208ENST00000565995 ARHGAP8P85298 464 aa14.15□□□□□ -0.14
RNF40-208ENST00000565995 ELAVL2Q12926 359 aaKnown RBP14.15□□□□□ -0.14
RNF40-208ENST00000565995 CTTNQ14247 550 aaKnown RBP14.15□□□□□ -0.14
RNF40-208ENST00000565995 PSMD5Q16401 504 aa14.15□□□□□ -0.14
RNF40-208ENST00000565995 FAM187BQ17R55 369 aa14.15□□□□□ -0.14
RNF40-208ENST00000565995 ZBTB41Q5SVQ8 909 aa14.15□□□□□ -0.14
RNF40-208ENST00000565995 PPP4R3CPQ6ZMV5 832 aa14.15□□□□□ -0.14
RNF40-208ENST00000565995 ST13P5Q8NFI4 369 aaPredicted RBP14.15□□□□□ -0.14
RNF40-208ENST00000565995 ITFG1Q8TB96 612 aa14.15□□□□□ -0.14
RNF40-208ENST00000565995 ATRIPQ8WXE1 791 aa14.15□□□□□ -0.14
RNF40-208ENST00000565995 APOL6Q9BWW8 343 aa14.15□□□□□ -0.14
RNF40-208ENST00000565995 FAM126AQ9BYI3 521 aaPredicted RBP14.15□□□□□ -0.14
RNF40-208ENST00000565995 BMP2KQ9NSY1 1161 aaPredicted RBP14.15□□□□□ -0.14
RNF40-208ENST00000565995 NUP210Q8TEM1 1887 aaPredicted RBP14.14□□□□□ -0.15
RNF40-208ENST00000565995 SHISA7A6NL88 538 aa14.14□□□□□ -0.15
RNF40-208ENST00000565995 PTGESO14684 152 aa14.14□□□□□ -0.15
RNF40-208ENST00000565995 CPLX1O14810 134 aa14.14□□□□□ -0.15
RNF40-208ENST00000565995 NCAM2O15394 837 aa14.14□□□□□ -0.15
RNF40-208ENST00000565995 B4GALT5O43286 388 aa14.14□□□□□ -0.15
RNF40-208ENST00000565995 TBC1D4O60343 1298 aa14.14□□□□□ -0.15
RNF40-208ENST00000565995 CCNT1O60563 726 aaKnown RBP14.14□□□□□ -0.15
RNF40-208ENST00000565995 ECI2O75521 394 aa14.14□□□□□ -0.15
RNF40-208ENST00000565995 NPTXRO95502 500 aa14.14□□□□□ -0.15
RNF40-208ENST00000565995 CSTF1Q05048 431 aaKnown RBP14.14□□□□□ -0.15
RNF40-208ENST00000565995 AXDND1Q5T1B0 1012 aaPredicted RBP14.14□□□□□ -0.15
RNF40-208ENST00000565995 LIN9Q5TKA1 542 aa14.14□□□□□ -0.15
RNF40-208ENST00000565995 FAM171A1Q5VUB5 890 aa14.14□□□□□ -0.15
RNF40-208ENST00000565995 TPH2Q8IWU9 490 aa14.14□□□□□ -0.15
RNF40-208ENST00000565995 ZNF687Q8N1G0 1237 aa14.14□□□□□ -0.15
RNF40-208ENST00000565995 RABGGTAQ92696 567 aa14.14□□□□□ -0.15
RNF40-208ENST00000565995 CNTNAP3BQ96NU0 1288 aa14.14□□□□□ -0.15
RNF40-208ENST00000565995 CNTNAP3Q9BZ76 1288 aa14.14□□□□□ -0.15
RNF40-208ENST00000565995 FZD8Q9H461 694 aa14.14□□□□□ -0.15
RNF40-208ENST00000565995 PRMT8Q9NR22 394 aaPredicted RBP14.14□□□□□ -0.15
RNF40-208ENST00000565995 KLK14Q9P0G3 267 aa14.14□□□□□ -0.15
RNF40-208ENST00000565995 NCDNQ9UBB6 729 aa14.14□□□□□ -0.15
RNF40-208ENST00000565995 DNMT3BQ9UBC3 853 aaKnown RBP14.14□□□□□ -0.15
RNF40-208ENST00000565995 KCNJ14Q9UNX9 436 aa14.14□□□□□ -0.15
RNF40-208ENST00000565995 EML5Q05BV3 1969 aa14.14□□□□□ -0.15
RNF40-208ENST00000565995 ANK1P16157 1881 aa14.14□□□□□ -0.15
RNF40-208ENST00000565995 CHD6Q8TD26 2715 aa14.14□□□□□ -0.15
RNF40-208ENST00000565995 TMEM189-UBE2V1I3L0A0 370 aa14.13□□□□□ -0.15
RNF40-208ENST00000565995 CCL16O15467 120 aa14.13□□□□□ -0.15
RNF40-208ENST00000565995 ADAM12O43184 909 aa14.13□□□□□ -0.15
RNF40-208ENST00000565995 KIF4AO95239 1232 aa14.13□□□□□ -0.15
RNF40-208ENST00000565995 BAG4O95429 457 aaKnown RBP14.13□□□□□ -0.15
RNF40-208ENST00000565995 THP07101 528 aa14.13□□□□□ -0.15
RNF40-208ENST00000565995 TDGF1P13385 188 aa14.13□□□□□ -0.15
RNF40-208ENST00000565995 FGFR3P22607 806 aa14.13□□□□□ -0.15
RNF40-208ENST00000565995 RBM25P49756 843 aaKnown RBP14.13□□□□□ -0.15
RNF40-208ENST00000565995 RARRES1P49788 294 aa14.13□□□□□ -0.15
RNF40-208ENST00000565995 CYP4A11Q02928 519 aa14.13□□□□□ -0.15
RNF40-208ENST00000565995 UBXN2BQ14CS0 331 aa14.13□□□□□ -0.15
RNF40-208ENST00000565995 CDCA2Q69YH5 1023 aaPredicted RBP14.13□□□□□ -0.15
RNF40-208ENST00000565995 NCAPH2Q6IBW4 605 aa14.13□□□□□ -0.15
RNF40-208ENST00000565995 CPLX2Q6PUV4 134 aaKnown RBP14.13□□□□□ -0.15
RNF40-208ENST00000565995 POTEDQ86YR6 584 aa14.13□□□□□ -0.15
RNF40-208ENST00000565995 NPAS3Q8IXF0 933 aa14.13□□□□□ -0.15
RNF40-208ENST00000565995 SECISBP2LQ93073 1101 aaKnown RBP14.13□□□□□ -0.15
RNF40-208ENST00000565995 EIF2AK1Q9BQI3 630 aaKnown RBP14.13□□□□□ -0.15
RNF40-208ENST00000565995 TM6SF1Q9BZW5 370 aa14.13□□□□□ -0.15
RNF40-208ENST00000565995 GDE1Q9NZC3 331 aa14.13□□□□□ -0.15
RNF40-208ENST00000565995 CACNG4Q9UBN1 327 aa14.13□□□□□ -0.15
RNF40-208ENST00000565995 PARP2Q9UGN5 583 aa14.13□□□□□ -0.15
RNF40-208ENST00000565995 USP24Q9UPU5 2620 aa14.13□□□□□ -0.15
RNF40-208ENST00000565995 CFAP47Q6ZTR5 3102 aa14.13□□□□□ -0.15
RNF40-208ENST00000565995 STK36Q9NRP7 1315 aa14.13□□□□□ -0.15
RNF40-208ENST00000565995 CD72P21854 359 aa14.12□□□□□ -0.15
RNF40-208ENST00000565995 TARSP26639 723 aaKnown RBP14.12□□□□□ -0.15
RNF40-208ENST00000565995 LMNB2Q03252 620 aa14.12□□□□□ -0.15
RNF40-208ENST00000565995 PABPC1LQ4VXU2 614 aaKnown RBP14.12□□□□□ -0.15
RNF40-208ENST00000565995 POTEHQ6S545 545 aa14.12□□□□□ -0.15
RNF40-208ENST00000565995 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.12□□□□□ -0.15
RNF40-208ENST00000565995 CDR2LQ86X02 465 aaPredicted RBP14.12□□□□□ -0.15
RNF40-208ENST00000565995 SLC7A14Q8TBB6 771 aa14.12□□□□□ -0.15
RNF40-208ENST00000565995 ELSPBP1Q96BH3 223 aa14.12□□□□□ -0.15
RNF40-208ENST00000565995 KXD1Q9BQD3 176 aa14.12□□□□□ -0.15
RNF40-208ENST00000565995 RTKNQ9BST9 563 aa14.12□□□□□ -0.15
RNF40-208ENST00000565995 PLA2G2FQ9BZM2 168 aa14.12□□□□□ -0.15
RNF40-208ENST00000565995 PRMT7Q9NVM4 692 aaPredicted RBP14.12□□□□□ -0.15
RNF40-208ENST00000565995 HCFC1R1Q9NWW0 138 aa14.12□□□□□ -0.15
RNF40-208ENST00000565995 MTRRQ9UBK8 725 aa14.12□□□□□ -0.15
RNF40-208ENST00000565995 PCDHA12Q9UN75 941 aa14.12□□□□□ -0.15
RNF40-208ENST00000565995 SMG5Q9UPR3 1016 aaKnown RBP14.12□□□□□ -0.15
RNF40-208ENST00000565995 ZNF638Q14966 1978 aaKnown RBP14.12□□□□□ -0.15
RNF40-208ENST00000565995 CNOT1A5YKK6 2376 aaKnown RBP14.11□□□□□ -0.15
RNF40-208ENST00000565995 KRT37O76014 449 aa14.11□□□□□ -0.15
RNF40-208ENST00000565995 MICAL2O94851 1124 aa14.11□□□□□ -0.15
RNF40-208ENST00000565995 OR1D2P34982 312 aa14.11□□□□□ -0.15
RNF40-208ENST00000565995 ADCY1Q08828 1119 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms