RNA–Protein interactions for RNA: ENST00000565922.1

CMTM3-211, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CMTM3, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-211ENST00000565922 CLASP2O75122 1294 aaKnown RBP21.72■■□□□ 1.07
CMTM3-211ENST00000565922 TADA2AO75478 443 aa21.72■■□□□ 1.07
CMTM3-211ENST00000565922 HARSP12081 509 aaKnown RBP21.72■■□□□ 1.07
CMTM3-211ENST00000565922 GLUD2P49448 558 aa21.72■■□□□ 1.07
CMTM3-211ENST00000565922 OSTNP61366 133 aa21.72■■□□□ 1.07
CMTM3-211ENST00000565922 MCL1Q07820 350 aa21.72■■□□□ 1.07
CMTM3-211ENST00000565922 PKP1Q13835 747 aa21.72■■□□□ 1.07
CMTM3-211ENST00000565922 LLGL2Q6P1M3 1020 aa21.72■■□□□ 1.07
CMTM3-211ENST00000565922 RNF168Q8IYW5 571 aaPredicted RBP21.72■■□□□ 1.07
CMTM3-211ENST00000565922 PDILTQ8N807 584 aa21.72■■□□□ 1.07
CMTM3-211ENST00000565922 VN1R2Q8NFZ6 395 aa21.72■■□□□ 1.07
CMTM3-211ENST00000565922 AUTS2Q8WXX7 1259 aa21.72■■□□□ 1.07
CMTM3-211ENST00000565922 HVCN1Q96D96 273 aa21.72■■□□□ 1.07
CMTM3-211ENST00000565922 NECAB3Q96P71 396 aaPredicted RBP21.72■■□□□ 1.07
CMTM3-211ENST00000565922 ATP6V1DQ9Y5K8 247 aa21.72■■□□□ 1.07
CMTM3-211ENST00000565922 MTCL1Q9Y4B5 1905 aaKnown RBP21.72■■□□□ 1.07
CMTM3-211ENST00000565922 PIGRP01833 764 aa21.71■■□□□ 1.07
CMTM3-211ENST00000565922 ME1P48163 572 aa21.71■■□□□ 1.07
CMTM3-211ENST00000565922 GTF2BQ00403 316 aa21.71■■□□□ 1.07
CMTM3-211ENST00000565922 CREMQ03060 361 aa21.71■■□□□ 1.07
CMTM3-211ENST00000565922 ELAVL2Q12926 359 aaKnown RBP21.71■■□□□ 1.07
CMTM3-211ENST00000565922 USP41Q3LFD5 358 aa21.71■■□□□ 1.07
CMTM3-211ENST00000565922 TPRNQ4KMQ1 711 aa21.71■■□□□ 1.07
CMTM3-211ENST00000565922 ANKRD54Q6NXT1 300 aa21.71■■□□□ 1.07
CMTM3-211ENST00000565922 SNX27Q96L92 541 aa21.71■■□□□ 1.07
CMTM3-211ENST00000565922 PPP1R10Q96QC0 940 aaKnown RBP21.71■■□□□ 1.07
CMTM3-211ENST00000565922 TNMDQ9H2S6 317 aa21.71■■□□□ 1.07
CMTM3-211ENST00000565922 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.71■■□□□ 1.07
CMTM3-211ENST00000565922 DZANK1Q9NVP4 752 aa21.71■■□□□ 1.07
CMTM3-211ENST00000565922 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.71■■□□□ 1.07
CMTM3-211ENST00000565922 MYMKA6NI61 221 aa21.7■■□□□ 1.06
CMTM3-211ENST00000565922 EFEMP2O95967 443 aa21.7■■□□□ 1.06
CMTM3-211ENST00000565922 AMPD3Q01432 767 aa21.7■■□□□ 1.06
CMTM3-211ENST00000565922 DSG1Q02413 1049 aa21.7■■□□□ 1.06
CMTM3-211ENST00000565922 NAB2Q15742 525 aa21.7■■□□□ 1.06
CMTM3-211ENST00000565922 XKR4Q5GH76 650 aa21.7■■□□□ 1.06
CMTM3-211ENST00000565922 GLRA4Q5JXX5 417 aa21.7■■□□□ 1.06
CMTM3-211ENST00000565922 ELMSAN1Q6PJG2 1045 aa21.7■■□□□ 1.06
CMTM3-211ENST00000565922 MAP4K3Q8IVH8 894 aa21.7■■□□□ 1.06
CMTM3-211ENST00000565922 IQUBQ8NA54 791 aa21.7■■□□□ 1.06
CMTM3-211ENST00000565922 ZBTB45Q96K62 511 aaPredicted RBP21.7■■□□□ 1.06
CMTM3-211ENST00000565922 PYM1Q9BRP8 204 aaKnown RBP21.7■■□□□ 1.06
CMTM3-211ENST00000565922 PANK2Q9BZ23 570 aa21.7■■□□□ 1.06
CMTM3-211ENST00000565922 MAGEF1Q9HAY2 307 aa21.7■■□□□ 1.06
CMTM3-211ENST00000565922 FAM13BQ9NYF5 915 aa21.7■■□□□ 1.06
CMTM3-211ENST00000565922 DPP7Q9UHL4 492 aa21.7■■□□□ 1.06
CMTM3-211ENST00000565922 PLXNA3P51805 1871 aa21.7■■□□□ 1.06
CMTM3-211ENST00000565922 VWA8A3KMH1 1905 aa21.69■■□□□ 1.06
CMTM3-211ENST00000565922 A0A087X0B3 334 aa21.69■■□□□ 1.06
CMTM3-211ENST00000565922 SMIM28A0A1B0GU29 152 aa21.69■■□□□ 1.06
CMTM3-211ENST00000565922 TMEM189-UBE2V1I3L0A0 370 aa21.69■■□□□ 1.06
CMTM3-211ENST00000565922 ADH1AP07327 375 aa21.69■■□□□ 1.06
CMTM3-211ENST00000565922 KLRC2P26717 231 aa21.69■■□□□ 1.06
CMTM3-211ENST00000565922 DNM1Q05193 864 aaKnown RBP21.69■■□□□ 1.06
CMTM3-211ENST00000565922 ALCAMQ13740 583 aa21.69■■□□□ 1.06
CMTM3-211ENST00000565922 ALKAL1Q6UXT8 129 aa21.69■■□□□ 1.06
CMTM3-211ENST00000565922 SFR1Q86XK3 245 aa21.69■■□□□ 1.06
CMTM3-211ENST00000565922 ADHFE1Q8IWW8 467 aa21.69■■□□□ 1.06
CMTM3-211ENST00000565922 DNAJC19Q96DA6 116 aa21.69■■□□□ 1.06
CMTM3-211ENST00000565922 DDX27Q96GQ7 796 aaKnown RBP21.69■■□□□ 1.06
CMTM3-211ENST00000565922 KLHL5Q96PQ7 755 aa21.69■■□□□ 1.06
CMTM3-211ENST00000565922 FIZ1Q96SL8 496 aa21.69■■□□□ 1.06
CMTM3-211ENST00000565922 MRPL44Q9H9J2 332 aaKnown RBP21.69■■□□□ 1.06
CMTM3-211ENST00000565922 PLEKHA5Q9HAU0 1116 aa21.69■■□□□ 1.06
CMTM3-211ENST00000565922 OLFML3Q9NRN5 406 aa21.69■■□□□ 1.06
CMTM3-211ENST00000565922 CHST7Q9NS84 486 aa21.69■■□□□ 1.06
CMTM3-211ENST00000565922 CNTN3Q9P232 1028 aa21.69■■□□□ 1.06
CMTM3-211ENST00000565922 C2CD2LO14523 706 aa21.68■■□□□ 1.06
CMTM3-211ENST00000565922 LILRB3O75022 631 aa21.68■■□□□ 1.06
CMTM3-211ENST00000565922 KIF4AO95239 1232 aa21.68■■□□□ 1.06
CMTM3-211ENST00000565922 CLTAP09496 248 aa21.68■■□□□ 1.06
CMTM3-211ENST00000565922 CNPP09543 421 aaKnown RBP21.68■■□□□ 1.06
CMTM3-211ENST00000565922 IDEP14735 1019 aa21.68■■□□□ 1.06
CMTM3-211ENST00000565922 KCNE1P15382 129 aa21.68■■□□□ 1.06
CMTM3-211ENST00000565922 NMT1P30419 496 aaKnown RBP21.68■■□□□ 1.06
CMTM3-211ENST00000565922 SSTR3P32745 418 aaPredicted RBP21.68■■□□□ 1.06
CMTM3-211ENST00000565922 KRT85P78386 507 aa21.68■■□□□ 1.06
CMTM3-211ENST00000565922 RBM10P98175 930 aaKnown RBP21.68■■□□□ 1.06
CMTM3-211ENST00000565922 ITIH3Q06033 890 aa21.68■■□□□ 1.06
CMTM3-211ENST00000565922 AXDND1Q5T1B0 1012 aaPredicted RBP21.68■■□□□ 1.06
CMTM3-211ENST00000565922 CES5AQ6NT32 575 aa21.68■■□□□ 1.06
CMTM3-211ENST00000565922 PDXDC1Q6P996 788 aa21.68■■□□□ 1.06
CMTM3-211ENST00000565922 SHC4Q6S5L8 630 aa21.68■■□□□ 1.06
CMTM3-211ENST00000565922 ZNF720Q7Z2F6 126 aa21.68■■□□□ 1.06
CMTM3-211ENST00000565922 CCDC65Q8IXS2 484 aa21.68■■□□□ 1.06
CMTM3-211ENST00000565922 PAAF1Q9BRP4 392 aa21.68■■□□□ 1.06
CMTM3-211ENST00000565922 RCOR1Q9UKL0 485 aa21.68■■□□□ 1.06
CMTM3-211ENST00000565922 EXOC7Q9UPT5 735 aa21.68■■□□□ 1.06
CMTM3-211ENST00000565922 USP15Q9Y4E8 981 aaPredicted RBP21.68■■□□□ 1.06
CMTM3-211ENST00000565922 ANK1P16157 1881 aa21.68■■□□□ 1.06
CMTM3-211ENST00000565922 FRMD3A2A2Y4 597 aa21.67■■□□□ 1.06
CMTM3-211ENST00000565922 F8W810 466 aa21.67■■□□□ 1.06
CMTM3-211ENST00000565922 OGTO15294 1046 aa21.67■■□□□ 1.06
CMTM3-211ENST00000565922 TRAPPC3O43617 180 aa21.67■■□□□ 1.06
CMTM3-211ENST00000565922 ZP2Q05996 745 aa21.67■■□□□ 1.06
CMTM3-211ENST00000565922 E2F4Q16254 413 aa21.67■■□□□ 1.06
CMTM3-211ENST00000565922 HERC4Q5GLZ8 1057 aaPredicted RBP21.67■■□□□ 1.06
CMTM3-211ENST00000565922 KIAA0319Q5VV43 1072 aa21.67■■□□□ 1.06
CMTM3-211ENST00000565922 SLFN12LQ6IEE8 588 aa21.67■■□□□ 1.06
CMTM3-211ENST00000565922 DCLRE1AQ6PJP8 1040 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms