RNA–Protein interactions for RNA: ENST00000565844.1

KNOP1-203, Transcript of lysine rich nucleolar protein 1, humanhuman

TSL 5

Gene KNOP1, Length 1,394 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-203ENST00000565844 CCDC85BQ15834 202 aaPredicted RBP16.61■□□□□ 0.25
KNOP1-203ENST00000565844 SNRNP35Q16560 246 aaKnown RBP16.61■□□□□ 0.25
KNOP1-203ENST00000565844 KYAT1Q16773 422 aa16.61■□□□□ 0.25
KNOP1-203ENST00000565844 PPP2R2DQ66LE6 453 aa16.61■□□□□ 0.25
KNOP1-203ENST00000565844 CBWD2Q8IUF1 395 aa16.61■□□□□ 0.25
KNOP1-203ENST00000565844 TMEM192Q8IY95 271 aa16.61■□□□□ 0.25
KNOP1-203ENST00000565844 HACE1Q8IYU2 909 aa16.61■□□□□ 0.25
KNOP1-203ENST00000565844 RNF169Q8NCN4 708 aa16.61■□□□□ 0.25
KNOP1-203ENST00000565844 SMG8Q8ND04 991 aaKnown RBP16.61■□□□□ 0.25
KNOP1-203ENST00000565844 RNF214Q8ND24 703 aa16.61■□□□□ 0.25
KNOP1-203ENST00000565844 FBXL18Q96ME1 805 aa16.61■□□□□ 0.25
KNOP1-203ENST00000565844 COL25A1Q9BXS0 654 aaPredicted RBP16.61■□□□□ 0.25
KNOP1-203ENST00000565844 THAP9Q9H5L6 903 aa16.61■□□□□ 0.25
KNOP1-203ENST00000565844 PDCD11Q14690 1871 aaKnown RBP16.6■□□□□ 0.25
KNOP1-203ENST00000565844 COL4A4P53420 1690 aaPredicted RBP16.6■□□□□ 0.25
KNOP1-203ENST00000565844 ABHD14A-ACY1A0A1B0GW23 586 aa16.6■□□□□ 0.25
KNOP1-203ENST00000565844 ZNF233A6NK53 670 aa16.6■□□□□ 0.25
KNOP1-203ENST00000565844 TULP1O00294 542 aaPredicted RBP16.6■□□□□ 0.25
KNOP1-203ENST00000565844 SLC16A3O15427 465 aaKnown RBP16.6■□□□□ 0.25
KNOP1-203ENST00000565844 CA3P07451 260 aa16.6■□□□□ 0.25
KNOP1-203ENST00000565844 CLTAP09496 248 aa16.6■□□□□ 0.25
KNOP1-203ENST00000565844 EPB41P11171 864 aaKnown RBP16.6■□□□□ 0.25
KNOP1-203ENST00000565844 PSMC2P35998 433 aaKnown RBP16.6■□□□□ 0.25
KNOP1-203ENST00000565844 NCAPHQ15003 741 aa16.6■□□□□ 0.25
KNOP1-203ENST00000565844 CCDC40Q4G0X9 1142 aa16.6■□□□□ 0.25
KNOP1-203ENST00000565844 HSP90AA4PQ58FG1 418 aa16.6■□□□□ 0.25
KNOP1-203ENST00000565844 CRELD2Q6UXH1 353 aaPredicted RBP16.6■□□□□ 0.25
KNOP1-203ENST00000565844 GAS2L3Q86XJ1 694 aa16.6■□□□□ 0.25
KNOP1-203ENST00000565844 ECHDC2Q86YB7 292 aa16.6■□□□□ 0.25
KNOP1-203ENST00000565844 FAM186BQ8IYM0 893 aa16.6■□□□□ 0.25
KNOP1-203ENST00000565844 ACAP3Q96P50 834 aa16.6■□□□□ 0.25
KNOP1-203ENST00000565844 SAMSN1Q9NSI8 373 aaKnown RBP16.6■□□□□ 0.25
KNOP1-203ENST00000565844 FANCLQ9NW38 375 aa16.6■□□□□ 0.25
KNOP1-203ENST00000565844 SNTG2Q9NY99 539 aa16.6■□□□□ 0.25
KNOP1-203ENST00000565844 RBAKQ9NYW8 714 aaPredicted RBP16.6■□□□□ 0.25
KNOP1-203ENST00000565844 CPSF3Q9UKF6 684 aaKnown RBP16.6■□□□□ 0.25
KNOP1-203ENST00000565844 TRIP11Q15643 1979 aa16.59■□□□□ 0.25
KNOP1-203ENST00000565844 TRANK1O15050 2925 aa16.59■□□□□ 0.25
KNOP1-203ENST00000565844 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.59■□□□□ 0.25
KNOP1-203ENST00000565844 GOLGA6L19H0YKK7 550 aa16.59■□□□□ 0.25
KNOP1-203ENST00000565844 RFXAPO00287 272 aa16.59■□□□□ 0.25
KNOP1-203ENST00000565844 EFCAB14O75071 495 aa16.59■□□□□ 0.25
KNOP1-203ENST00000565844 ZNF623O75123 536 aa16.59■□□□□ 0.25
KNOP1-203ENST00000565844 RECQL4O94761 1208 aa16.59■□□□□ 0.25
KNOP1-203ENST00000565844 BAIAP3O94812 1187 aa16.59■□□□□ 0.25
KNOP1-203ENST00000565844 ARHGEF15O94989 841 aa16.59■□□□□ 0.25
KNOP1-203ENST00000565844 ADRB2P07550 413 aa16.59■□□□□ 0.25
KNOP1-203ENST00000565844 CXCL8P10145 99 aa16.59■□□□□ 0.25
KNOP1-203ENST00000565844 ITGA4P13612 1032 aa16.59■□□□□ 0.25
KNOP1-203ENST00000565844 AKAP5P24588 427 aa16.59■□□□□ 0.25
KNOP1-203ENST00000565844 YARSP54577 528 aaKnown RBP16.59■□□□□ 0.25
KNOP1-203ENST00000565844 SPRED2Q7Z698 418 aa16.59■□□□□ 0.25
KNOP1-203ENST00000565844 FILIP1Q7Z7B0 1213 aa16.59■□□□□ 0.25
KNOP1-203ENST00000565844 CREBRFQ8IUR6 639 aa16.59■□□□□ 0.25
KNOP1-203ENST00000565844 FAM114A1Q8IWE2 563 aa16.59■□□□□ 0.25
KNOP1-203ENST00000565844 MICALL1Q8N3F8 863 aa16.59■□□□□ 0.25
KNOP1-203ENST00000565844 LPPQ93052 612 aa16.59■□□□□ 0.25
KNOP1-203ENST00000565844 PGBD4Q96DM1 585 aa16.59■□□□□ 0.25
KNOP1-203ENST00000565844 CNOT6LQ96LI5 555 aaKnown RBP16.59■□□□□ 0.25
KNOP1-203ENST00000565844 MKNK1Q9BUB5 465 aa16.59■□□□□ 0.25
KNOP1-203ENST00000565844 RNF39Q9H2S5 420 aa16.59■□□□□ 0.25
KNOP1-203ENST00000565844 RPF1Q9H9Y2 349 aaKnown RBP16.59■□□□□ 0.25
KNOP1-203ENST00000565844 MAGEC2Q9UBF1 373 aaPredicted RBP16.59■□□□□ 0.25
KNOP1-203ENST00000565844 PARP2Q9UGN5 583 aa16.59■□□□□ 0.25
KNOP1-203ENST00000565844 TCF20Q9UGU0 1960 aaKnown RBP16.58■□□□□ 0.25
KNOP1-203ENST00000565844 TTC3P53804 2025 aa16.58■□□□□ 0.24
KNOP1-203ENST00000565844 GNA14O95837 355 aa16.58■□□□□ 0.24
KNOP1-203ENST00000565844 ATF7P17544 494 aaPredicted RBP16.58■□□□□ 0.24
KNOP1-203ENST00000565844 TPM4P67936 248 aa16.58■□□□□ 0.24
KNOP1-203ENST00000565844 FAM189BP81408 668 aa16.58■□□□□ 0.24
KNOP1-203ENST00000565844 CYP24A1Q07973 514 aa16.58■□□□□ 0.24
KNOP1-203ENST00000565844 ENOX2Q16206 610 aaKnown RBP16.58■□□□□ 0.24
KNOP1-203ENST00000565844 CDKAL1Q5VV42 579 aa16.58■□□□□ 0.24
KNOP1-203ENST00000565844 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.58■□□□□ 0.24
KNOP1-203ENST00000565844 MRPL10Q7Z7H8 261 aaKnown RBP16.58■□□□□ 0.24
KNOP1-203ENST00000565844 IRF2BP1Q8IU81 584 aa16.58■□□□□ 0.24
KNOP1-203ENST00000565844 FAM212AQ96EL1 285 aa16.58■□□□□ 0.24
KNOP1-203ENST00000565844 TOPORSQ9NS56 1045 aaPredicted RBP16.58■□□□□ 0.24
KNOP1-203ENST00000565844 TMEM161AQ9NX61 479 aa16.58■□□□□ 0.24
KNOP1-203ENST00000565844 LRFN2Q9ULH4 789 aa16.58■□□□□ 0.24
KNOP1-203ENST00000565844 PCDHA11Q9Y5I1 949 aa16.58■□□□□ 0.24
KNOP1-203ENST00000565844 PRRC2BQ5JSZ5 2229 aaKnown RBP16.58■□□□□ 0.24
KNOP1-203ENST00000565844 TDRD15B5MCY1 1934 aaKnown RBP16.58■□□□□ 0.24
KNOP1-203ENST00000565844 MEIS3P2A8K0S8 358 aa16.57■□□□□ 0.24
KNOP1-203ENST00000565844 MAPK13O15264 365 aa16.57■□□□□ 0.24
KNOP1-203ENST00000565844 EOMESO95936 686 aa16.57■□□□□ 0.24
KNOP1-203ENST00000565844 AMHP03971 560 aa16.57■□□□□ 0.24
KNOP1-203ENST00000565844 KRT13P13646 458 aa16.57■□□□□ 0.24
KNOP1-203ENST00000565844 KCNJ6P48051 423 aa16.57■□□□□ 0.24
KNOP1-203ENST00000565844 WDR5P61964 334 aaKnown RBP16.57■□□□□ 0.24
KNOP1-203ENST00000565844 DEFB103AP81534 67 aa16.57■□□□□ 0.24
KNOP1-203ENST00000565844 PPP2R3AQ06190 1150 aa16.57■□□□□ 0.24
KNOP1-203ENST00000565844 INTS8Q75QN2 995 aaKnown RBP16.57■□□□□ 0.24
KNOP1-203ENST00000565844 ZNF598Q86UK7 904 aaKnown RBP16.57■□□□□ 0.24
KNOP1-203ENST00000565844 BRSK2Q8IWQ3 736 aa16.57■□□□□ 0.24
KNOP1-203ENST00000565844 CCDC127Q96BQ5 260 aa16.57■□□□□ 0.24
KNOP1-203ENST00000565844 SNX27Q96L92 541 aa16.57■□□□□ 0.24
KNOP1-203ENST00000565844 MFSD14AQ96MC6 490 aa16.57■□□□□ 0.24
KNOP1-203ENST00000565844 RBSNQ9H1K0 784 aa16.57■□□□□ 0.24
KNOP1-203ENST00000565844 HSD3B7Q9H2F3 369 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms