RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 AK8Q96MA6 479 aa21.83■■□□□ 1.09
CLN6-206ENST00000565471 PPP1R10Q96QC0 940 aaKnown RBP21.83■■□□□ 1.09
CLN6-206ENST00000565471 TTPALQ9BTX7 342 aa21.83■■□□□ 1.09
CLN6-206ENST00000565471 CDT1Q9H211 546 aa21.83■■□□□ 1.09
CLN6-206ENST00000565471 MUC6Q6W4X9 2439 aa21.82■■□□□ 1.08
CLN6-206ENST00000565471 MTCL1Q9Y4B5 1905 aaKnown RBP21.82■■□□□ 1.08
CLN6-206ENST00000565471 CCDC195A0A1B0GUA6 201 aa21.82■■□□□ 1.08
CLN6-206ENST00000565471 TMEM189-UBE2V1I3L0A0 370 aa21.82■■□□□ 1.08
CLN6-206ENST00000565471 TGM5O43548 720 aa21.82■■□□□ 1.08
CLN6-206ENST00000565471 HOXD11P31277 338 aaPredicted RBP21.82■■□□□ 1.08
CLN6-206ENST00000565471 ZNF568Q3ZCX4 644 aa21.82■■□□□ 1.08
CLN6-206ENST00000565471 TMEM119Q4V9L6 283 aa21.82■■□□□ 1.08
CLN6-206ENST00000565471 FAM171A1Q5VUB5 890 aa21.82■■□□□ 1.08
CLN6-206ENST00000565471 PDXDC1Q6P996 788 aa21.82■■□□□ 1.08
CLN6-206ENST00000565471 BRAPQ7Z569 592 aa21.82■■□□□ 1.08
CLN6-206ENST00000565471 PALB2Q86YC2 1186 aa21.82■■□□□ 1.08
CLN6-206ENST00000565471 PIK3R5Q8WYR1 880 aa21.82■■□□□ 1.08
CLN6-206ENST00000565471 CCDC94Q9BW85 323 aaPredicted RBP21.82■■□□□ 1.08
CLN6-206ENST00000565471 TOPORSQ9NS56 1045 aaPredicted RBP21.82■■□□□ 1.08
CLN6-206ENST00000565471 ZDHHC7Q9NXF8 308 aa21.82■■□□□ 1.08
CLN6-206ENST00000565471 LIMD1Q9UGP4 676 aa21.82■■□□□ 1.08
CLN6-206ENST00000565471 MYO10Q9HD67 2058 aa21.81■■□□□ 1.08
CLN6-206ENST00000565471 BRD1O95696 1058 aa21.81■■□□□ 1.08
CLN6-206ENST00000565471 BMP15O95972 392 aa21.81■■□□□ 1.08
CLN6-206ENST00000565471 MCF2P10911 925 aa21.81■■□□□ 1.08
CLN6-206ENST00000565471 PLS3P13797 630 aa21.81■■□□□ 1.08
CLN6-206ENST00000565471 PROZP22891 400 aa21.81■■□□□ 1.08
CLN6-206ENST00000565471 YARSP54577 528 aaKnown RBP21.81■■□□□ 1.08
CLN6-206ENST00000565471 SLC12A3P55017 1021 aa21.81■■□□□ 1.08
CLN6-206ENST00000565471 XKR4Q5GH76 650 aa21.81■■□□□ 1.08
CLN6-206ENST00000565471 GLRA4Q5JXX5 417 aa21.81■■□□□ 1.08
CLN6-206ENST00000565471 PRSS55Q6UWB4 352 aaPredicted RBP21.81■■□□□ 1.08
CLN6-206ENST00000565471 UROC1Q96N76 676 aa21.81■■□□□ 1.08
CLN6-206ENST00000565471 TARS2Q9BW92 718 aaKnown RBP21.81■■□□□ 1.08
CLN6-206ENST00000565471 WDR6Q9NNW5 1121 aaKnown RBP21.81■■□□□ 1.08
CLN6-206ENST00000565471 SFI1A8K8P3 1242 aa21.8■■□□□ 1.08
CLN6-206ENST00000565471 ABLIM1O14639 778 aa21.8■■□□□ 1.08
CLN6-206ENST00000565471 SLC16A4O15374 487 aa21.8■■□□□ 1.08
CLN6-206ENST00000565471 RFPL2O75678 378 aa21.8■■□□□ 1.08
CLN6-206ENST00000565471 ASGR2P07307 311 aa21.8■■□□□ 1.08
CLN6-206ENST00000565471 PLA2G4BP0C869 781 aa21.8■■□□□ 1.08
CLN6-206ENST00000565471 RPL17P18621 184 aaKnown RBP21.8■■□□□ 1.08
CLN6-206ENST00000565471 SMTNP53814 917 aa21.8■■□□□ 1.08
CLN6-206ENST00000565471 CUL4AQ13619 759 aa21.8■■□□□ 1.08
CLN6-206ENST00000565471 PSMD5Q16401 504 aa21.8■■□□□ 1.08
CLN6-206ENST00000565471 DCLRE1AQ6PJP8 1040 aa21.8■■□□□ 1.08
CLN6-206ENST00000565471 MPZL3Q6UWV2 235 aa21.8■■□□□ 1.08
CLN6-206ENST00000565471 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.8■■□□□ 1.08
CLN6-206ENST00000565471 CEP120Q8N960 986 aa21.8■■□□□ 1.08
CLN6-206ENST00000565471 LNX1Q8TBB1 728 aaPredicted RBP21.8■■□□□ 1.08
CLN6-206ENST00000565471 SMG7Q92540 1137 aaKnown RBP21.8■■□□□ 1.08
CLN6-206ENST00000565471 STAMQ92783 540 aa21.8■■□□□ 1.08
CLN6-206ENST00000565471 ZNF707Q96C28 371 aaPredicted RBP21.8■■□□□ 1.08
CLN6-206ENST00000565471 PLIN2Q99541 437 aa21.8■■□□□ 1.08
CLN6-206ENST00000565471 PRRX2Q99811 253 aa21.8■■□□□ 1.08
CLN6-206ENST00000565471 KMT2EQ8IZD2 1858 aa21.79■■□□□ 1.08
CLN6-206ENST00000565471 SMIM28A0A1B0GU29 152 aa21.79■■□□□ 1.08
CLN6-206ENST00000565471 SPATA31D3P0C874 917 aa21.79■■□□□ 1.08
CLN6-206ENST00000565471 STRN3Q13033 797 aa21.79■■□□□ 1.08
CLN6-206ENST00000565471 ALKAL1Q6UXT8 129 aa21.79■■□□□ 1.08
CLN6-206ENST00000565471 SPATA31D4Q6ZUB0 917 aa21.79■■□□□ 1.08
CLN6-206ENST00000565471 CEP57Q86XR8 500 aa21.79■■□□□ 1.08
CLN6-206ENST00000565471 GLYCTKQ8IVS8 523 aa21.79■■□□□ 1.08
CLN6-206ENST00000565471 TMEM161BQ8NDZ6 487 aa21.79■■□□□ 1.08
CLN6-206ENST00000565471 CLSTN3Q9BQT9 956 aa21.79■■□□□ 1.08
CLN6-206ENST00000565471 SLC38A7Q9NVC3 462 aa21.79■■□□□ 1.08
CLN6-206ENST00000565471 FBXW11Q9UKB1 542 aa21.79■■□□□ 1.08
CLN6-206ENST00000565471 MYH11P35749 1972 aa21.79■■□□□ 1.08
CLN6-206ENST00000565471 TRIP11Q15643 1979 aa21.79■■□□□ 1.08
CLN6-206ENST00000565471 CLUHO75153 1309 aa21.79■■□□□ 1.08
CLN6-206ENST00000565471 ZMYND10O75800 440 aa21.78■■□□□ 1.08
CLN6-206ENST00000565471 B3GAT3O94766 335 aa21.78■■□□□ 1.08
CLN6-206ENST00000565471 MYBP10242 640 aa21.78■■□□□ 1.08
CLN6-206ENST00000565471 FGFR3P22607 806 aa21.78■■□□□ 1.08
CLN6-206ENST00000565471 UBA7P41226 1012 aa21.78■■□□□ 1.08
CLN6-206ENST00000565471 CLCNKBP51801 687 aa21.78■■□□□ 1.08
CLN6-206ENST00000565471 RAD51AP2Q09MP3 1159 aa21.78■■□□□ 1.08
CLN6-206ENST00000565471 UPP1Q16831 310 aa21.78■■□□□ 1.08
CLN6-206ENST00000565471 KCNN1Q92952 543 aa21.78■■□□□ 1.08
CLN6-206ENST00000565471 CALML4Q96GE6 196 aa21.78■■□□□ 1.08
CLN6-206ENST00000565471 DDX27Q96GQ7 796 aaKnown RBP21.78■■□□□ 1.08
CLN6-206ENST00000565471 SNX27Q96L92 541 aa21.78■■□□□ 1.08
CLN6-206ENST00000565471 ACAP3Q96P50 834 aa21.78■■□□□ 1.08
CLN6-206ENST00000565471 TCHPQ9BT92 498 aa21.78■■□□□ 1.08
CLN6-206ENST00000565471 PRKD2Q9BZL6 878 aa21.78■■□□□ 1.08
CLN6-206ENST00000565471 LARSQ9P2J5 1176 aaKnown RBP21.78■■□□□ 1.08
CLN6-206ENST00000565471 VWA8A3KMH1 1905 aa21.78■■□□□ 1.08
CLN6-206ENST00000565471 H0YCG3 227 aa21.77■■□□□ 1.08
CLN6-206ENST00000565471 TOM1L1O75674 476 aa21.77■■□□□ 1.08
CLN6-206ENST00000565471 MAPTP10636 758 aaKnown RBP21.77■■□□□ 1.08
CLN6-206ENST00000565471 KCNE1P15382 129 aa21.77■■□□□ 1.08
CLN6-206ENST00000565471 OSTNP61366 133 aa21.77■■□□□ 1.08
CLN6-206ENST00000565471 NHLH1Q02575 133 aa21.77■■□□□ 1.08
CLN6-206ENST00000565471 CD300LGQ6UXG3 332 aa21.77■■□□□ 1.08
CLN6-206ENST00000565471 ZPBP2Q6X784 338 aa21.77■■□□□ 1.08
CLN6-206ENST00000565471 PIDD1Q9HB75 910 aa21.77■■□□□ 1.08
CLN6-206ENST00000565471 IGSF9Q9P2J2 1179 aa21.77■■□□□ 1.08
CLN6-206ENST00000565471 ODF2LQ9ULJ1 636 aa21.77■■□□□ 1.08
CLN6-206ENST00000565471 TRAPPC3O43617 180 aa21.76■■□□□ 1.07
CLN6-206ENST00000565471 N4BP1O75113 896 aaKnown RBP21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms