RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 CLK2P49760 499 aaKnown RBP10.09□□□□□ -0.79
VPS9D1-205ENST00000565452 ANTXR2P58335 489 aa10.09□□□□□ -0.79
VPS9D1-205ENST00000565452 SPIRE1Q08AE8 756 aa10.09□□□□□ -0.79
VPS9D1-205ENST00000565452 ELAVL2Q12926 359 aaKnown RBP10.09□□□□□ -0.79
VPS9D1-205ENST00000565452 HSP90AA2PQ14568 343 aaPredicted RBP10.09□□□□□ -0.79
VPS9D1-205ENST00000565452 PCBP1Q15365 356 aaKnown RBP eCLIP10.09□□□□□ -0.79
VPS9D1-205ENST00000565452 ELF2Q15723 593 aa10.09□□□□□ -0.79
VPS9D1-205ENST00000565452 SLC5A9Q2M3M2 681 aa10.09□□□□□ -0.79
VPS9D1-205ENST00000565452 TTC22Q5TAA0 569 aa10.09□□□□□ -0.79
VPS9D1-205ENST00000565452 CYP4A22Q5TCH4 519 aa10.09□□□□□ -0.79
VPS9D1-205ENST00000565452 JAKMIP3Q5VZ66 844 aa10.09□□□□□ -0.79
VPS9D1-205ENST00000565452 WWC2Q6AWC2 1192 aa10.09□□□□□ -0.79
VPS9D1-205ENST00000565452 TMTC3Q6ZXV5 915 aa10.09□□□□□ -0.79
VPS9D1-205ENST00000565452 MFSD6LQ8IWD5 586 aa10.09□□□□□ -0.79
VPS9D1-205ENST00000565452 YAF2Q8IY57 180 aa10.09□□□□□ -0.79
VPS9D1-205ENST00000565452 PRPF31Q8WWY3 499 aaKnown RBP10.09□□□□□ -0.79
VPS9D1-205ENST00000565452 RABGGTAQ92696 567 aa10.09□□□□□ -0.79
VPS9D1-205ENST00000565452 SMARCD2Q92925 531 aa10.09□□□□□ -0.79
VPS9D1-205ENST00000565452 CCDC51Q96ER9 411 aa10.09□□□□□ -0.79
VPS9D1-205ENST00000565452 ZFP42Q96MM3 310 aa10.09□□□□□ -0.79
VPS9D1-205ENST00000565452 ASB16Q96NS5 453 aa10.09□□□□□ -0.79
VPS9D1-205ENST00000565452 TRIM6Q9C030 488 aaPredicted RBP10.09□□□□□ -0.79
VPS9D1-205ENST00000565452 SLC32A1Q9H598 525 aa10.09□□□□□ -0.79
VPS9D1-205ENST00000565452 TMEM9BQ9NQ34 198 aa10.09□□□□□ -0.79
VPS9D1-205ENST00000565452 RBM12Q9NTZ6 932 aaKnown RBP10.09□□□□□ -0.79
VPS9D1-205ENST00000565452 GPSM3Q9Y4H4 160 aa10.09□□□□□ -0.79
VPS9D1-205ENST00000565452 COL4A3BPQ9Y5P4 624 aa10.09□□□□□ -0.79
VPS9D1-205ENST00000565452 SLC12A7Q9Y666 1083 aa10.09□□□□□ -0.79
VPS9D1-205ENST00000565452 RALGAPA1Q6GYQ0 2036 aa10.09□□□□□ -0.79
VPS9D1-205ENST00000565452 hCG_1984214I3L0E3 225 aa10.08□□□□□ -0.8
VPS9D1-205ENST00000565452 KHNYNO15037 678 aaKnown RBP10.08□□□□□ -0.8
VPS9D1-205ENST00000565452 HYAL3O43820 417 aaPredicted RBP10.08□□□□□ -0.8
VPS9D1-205ENST00000565452 GAS7O60861 476 aa10.08□□□□□ -0.8
VPS9D1-205ENST00000565452 ATG13O75143 517 aa10.08□□□□□ -0.8
VPS9D1-205ENST00000565452 LRG1P02750 347 aa10.08□□□□□ -0.8
VPS9D1-205ENST00000565452 CEBPBP17676 345 aa10.08□□□□□ -0.8
VPS9D1-205ENST00000565452 RXRAP19793 462 aa10.08□□□□□ -0.8
VPS9D1-205ENST00000565452 FCARP24071 287 aa10.08□□□□□ -0.8
VPS9D1-205ENST00000565452 ELF1P32519 619 aa10.08□□□□□ -0.8
VPS9D1-205ENST00000565452 UGCGQ16739 394 aa10.08□□□□□ -0.8
VPS9D1-205ENST00000565452 TCEAL6Q6IPX3 200 aa10.08□□□□□ -0.8
VPS9D1-205ENST00000565452 NOTUMQ6P988 496 aa10.08□□□□□ -0.8
VPS9D1-205ENST00000565452 VITQ6UXI7 678 aa10.08□□□□□ -0.8
VPS9D1-205ENST00000565452 SYNE3Q6ZMZ3 975 aa10.08□□□□□ -0.8
VPS9D1-205ENST00000565452 RALGPS2Q86X27 583 aaPredicted RBP10.08□□□□□ -0.8
VPS9D1-205ENST00000565452 PROSER1Q86XN7 944 aa10.08□□□□□ -0.8
VPS9D1-205ENST00000565452 ZNF713Q8N859 430 aaPredicted RBP10.08□□□□□ -0.8
VPS9D1-205ENST00000565452 GLIS3Q8NEA6 775 aa10.08□□□□□ -0.8
VPS9D1-205ENST00000565452 RDM1Q8NG50 284 aa10.08□□□□□ -0.8
VPS9D1-205ENST00000565452 CRYGNQ8WXF5 182 aa10.08□□□□□ -0.8
VPS9D1-205ENST00000565452 TCEAL3Q969E4 200 aa10.08□□□□□ -0.8
VPS9D1-205ENST00000565452 TMEM87BQ96K49 555 aa10.08□□□□□ -0.8
VPS9D1-205ENST00000565452 CEP89Q96ST8 783 aa10.08□□□□□ -0.8
VPS9D1-205ENST00000565452 RIT2Q99578 217 aa10.08□□□□□ -0.8
VPS9D1-205ENST00000565452 CORO1BQ9BR76 489 aa10.08□□□□□ -0.8
VPS9D1-205ENST00000565452 MINDY3Q9H8M7 445 aa10.08□□□□□ -0.8
VPS9D1-205ENST00000565452 SLC8A2Q9UPR5 921 aa10.08□□□□□ -0.8
VPS9D1-205ENST00000565452 HES2Q9Y543 173 aa10.08□□□□□ -0.8
VPS9D1-205ENST00000565452 V9GY48 417 aaPredicted RBP10.08□□□□□ -0.8
VPS9D1-205ENST00000565452 H0Y626 953 aa10.07□□□□□ -0.8
VPS9D1-205ENST00000565452 CHADO15335 359 aa10.07□□□□□ -0.8
VPS9D1-205ENST00000565452 ADAM12O43184 909 aa10.07□□□□□ -0.8
VPS9D1-205ENST00000565452 CHMP2AO43633 222 aa10.07□□□□□ -0.8
VPS9D1-205ENST00000565452 PRC1O43663 620 aa10.07□□□□□ -0.8
VPS9D1-205ENST00000565452 TRIM16O95361 564 aa10.07□□□□□ -0.8
VPS9D1-205ENST00000565452 MCM5P33992 734 aa10.07□□□□□ -0.8
VPS9D1-205ENST00000565452 LIFRP42702 1097 aa10.07□□□□□ -0.8
VPS9D1-205ENST00000565452 FGD1P98174 961 aa10.07□□□□□ -0.8
VPS9D1-205ENST00000565452 CREB5Q02930 508 aa10.07□□□□□ -0.8
VPS9D1-205ENST00000565452 LAMTOR4Q0VGL1 99 aa10.07□□□□□ -0.8
VPS9D1-205ENST00000565452 GRIK3Q13003 919 aa10.07□□□□□ -0.8
VPS9D1-205ENST00000565452 PLK5Q496M5 336 aa10.07□□□□□ -0.8
VPS9D1-205ENST00000565452 BMP2KLQ5H9B9 411 aa10.07□□□□□ -0.8
VPS9D1-205ENST00000565452 TYW1BQ6NUM6 668 aa10.07□□□□□ -0.8
VPS9D1-205ENST00000565452 KIAA1211LQ6NV74 962 aa10.07□□□□□ -0.8
VPS9D1-205ENST00000565452 POTEHQ6S545 545 aa10.07□□□□□ -0.8
VPS9D1-205ENST00000565452 Q6ZS52 159 aa10.07□□□□□ -0.8
VPS9D1-205ENST00000565452 PDZD4Q76G19 769 aaPredicted RBP10.07□□□□□ -0.8
VPS9D1-205ENST00000565452 MIER3Q7Z3K6 550 aa10.07□□□□□ -0.8
VPS9D1-205ENST00000565452 MB21D2Q8IYB1 491 aaPredicted RBP10.07□□□□□ -0.8
VPS9D1-205ENST00000565452 CAMKK1Q8N5S9 505 aa10.07□□□□□ -0.8
VPS9D1-205ENST00000565452 PSPC1Q8WXF1 523 aaKnown RBP10.07□□□□□ -0.8
VPS9D1-205ENST00000565452 SLC7A3Q8WY07 619 aa10.07□□□□□ -0.8
VPS9D1-205ENST00000565452 SH2D3AQ9BRG2 576 aa10.07□□□□□ -0.8
VPS9D1-205ENST00000565452 MKNK1Q9BUB5 465 aa10.07□□□□□ -0.8
VPS9D1-205ENST00000565452 TEKT3Q9BXF9 490 aa10.07□□□□□ -0.8
VPS9D1-205ENST00000565452 EIF2AQ9BY44 585 aaKnown RBP10.07□□□□□ -0.8
VPS9D1-205ENST00000565452 GPR88Q9GZN0 384 aa10.07□□□□□ -0.8
VPS9D1-205ENST00000565452 CSRNP2Q9H175 543 aa10.07□□□□□ -0.8
VPS9D1-205ENST00000565452 TRPV4Q9HBA0 871 aa10.07□□□□□ -0.8
VPS9D1-205ENST00000565452 C2orf42Q9NWW7 574 aa10.07□□□□□ -0.8
VPS9D1-205ENST00000565452 BARHL2Q9NY43 387 aa10.07□□□□□ -0.8
VPS9D1-205ENST00000565452 HELZ2Q9BYK8 2649 aaKnown RBP10.07□□□□□ -0.8
VPS9D1-205ENST00000565452 MYH15Q9Y2K3 1946 aa10.07□□□□□ -0.8
VPS9D1-205ENST00000565452 MAST4O15021 2626 aa10.06□□□□□ -0.8
VPS9D1-205ENST00000565452 BCLAF3A2AJT9 711 aaKnown RBP10.06□□□□□ -0.8
VPS9D1-205ENST00000565452 WDR27A2RRH5 827 aa10.06□□□□□ -0.8
VPS9D1-205ENST00000565452 MYBPHLA2RUH7 354 aa10.06□□□□□ -0.8
VPS9D1-205ENST00000565452 FAM221BA6H8Z2 402 aa10.06□□□□□ -0.8
VPS9D1-205ENST00000565452 PRRG1O14668 218 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms