RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 ACO2Q99798 780 aaKnown RBP7.04□□□□□ -1.28
TCF4-228ENST00000565393 CLSTN3Q9BQT9 956 aa7.04□□□□□ -1.28
TCF4-228ENST00000565393 NTPCRQ9BSD7 190 aaKnown RBP7.04□□□□□ -1.28
TCF4-228ENST00000565393 RUSC1Q9BVN2 902 aa7.04□□□□□ -1.28
TCF4-228ENST00000565393 PRKD2Q9BZL6 878 aa7.04□□□□□ -1.28
TCF4-228ENST00000565393 IRF2BPLQ9H1B7 796 aa7.04□□□□□ -1.28
TCF4-228ENST00000565393 ZHX3Q9H4I2 956 aa7.04□□□□□ -1.28
TCF4-228ENST00000565393 TMEM134Q9H6X4 195 aa7.04□□□□□ -1.28
TCF4-228ENST00000565393 WDR6Q9NNW5 1121 aaKnown RBP7.04□□□□□ -1.28
TCF4-228ENST00000565393 TOPORSQ9NS56 1045 aaPredicted RBP7.04□□□□□ -1.28
TCF4-228ENST00000565393 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.04□□□□□ -1.28
TCF4-228ENST00000565393 DAXXQ9UER7 740 aaPredicted RBP7.04□□□□□ -1.28
TCF4-228ENST00000565393 CHD9Q3L8U1 2897 aa7.04□□□□□ -1.28
TCF4-228ENST00000565393 PHLPP2Q6ZVD8 1323 aa7.03□□□□□ -1.28
TCF4-228ENST00000565393 NPHP3-ACAD11A0A0J9YXS1 232 aa7.03□□□□□ -1.28
TCF4-228ENST00000565393 H0Y858 1186 aa7.03□□□□□ -1.28
TCF4-228ENST00000565393 I3L4J1 428 aa7.03□□□□□ -1.28
TCF4-228ENST00000565393 ZMYND10O75800 440 aa7.03□□□□□ -1.28
TCF4-228ENST00000565393 CD2BP2O95400 341 aaKnown RBP7.03□□□□□ -1.28
TCF4-228ENST00000565393 C1RP00736 705 aa7.03□□□□□ -1.28
TCF4-228ENST00000565393 EDN1P05305 212 aa7.03□□□□□ -1.28
TCF4-228ENST00000565393 KRT18P05783 430 aaKnown RBP7.03□□□□□ -1.28
TCF4-228ENST00000565393 CFHP08603 1231 aa7.03□□□□□ -1.28
TCF4-228ENST00000565393 PLA2G4BP0C869 781 aa7.03□□□□□ -1.28
TCF4-228ENST00000565393 MCF2P10911 925 aa7.03□□□□□ -1.28
TCF4-228ENST00000565393 LAMP2P13473 410 aa7.03□□□□□ -1.28
TCF4-228ENST00000565393 PLS3P13797 630 aa7.03□□□□□ -1.28
TCF4-228ENST00000565393 RFX1P22670 979 aa7.03□□□□□ -1.28
TCF4-228ENST00000565393 FSHRP23945 695 aa7.03□□□□□ -1.28
TCF4-228ENST00000565393 IGFBP6P24592 240 aaPredicted RBP7.03□□□□□ -1.28
TCF4-228ENST00000565393 GRM5P41594 1212 aa7.03□□□□□ -1.28
TCF4-228ENST00000565393 BRCC3P46736 316 aa7.03□□□□□ -1.28
TCF4-228ENST00000565393 VCPP55072 806 aaKnown RBP7.03□□□□□ -1.28
TCF4-228ENST00000565393 ARPP19P56211 112 aa7.03□□□□□ -1.28
TCF4-228ENST00000565393 ATP2C1P98194 919 aaPredicted RBP7.03□□□□□ -1.28
TCF4-228ENST00000565393 CACNB1Q02641 598 aaPredicted RBP7.03□□□□□ -1.28
TCF4-228ENST00000565393 NAB2Q15742 525 aa7.03□□□□□ -1.28
TCF4-228ENST00000565393 PSMD5Q16401 504 aa7.03□□□□□ -1.28
TCF4-228ENST00000565393 SEZ6Q53EL9 994 aa7.03□□□□□ -1.28
TCF4-228ENST00000565393 LIN9Q5TKA1 542 aa7.03□□□□□ -1.28
TCF4-228ENST00000565393 KCNK18Q7Z418 384 aa7.03□□□□□ -1.28
TCF4-228ENST00000565393 GRASPQ7Z6J2 395 aaPredicted RBP7.03□□□□□ -1.28
TCF4-228ENST00000565393 DAW1Q8N136 415 aa7.03□□□□□ -1.28
TCF4-228ENST00000565393 SLC44A3Q8N4M1 653 aa7.03□□□□□ -1.28
TCF4-228ENST00000565393 KCTD17Q8N5Z5 321 aa7.03□□□□□ -1.28
TCF4-228ENST00000565393 MYCT1Q8N699 235 aa7.03□□□□□ -1.28
TCF4-228ENST00000565393 PRSS33Q8NF86 280 aa7.03□□□□□ -1.28
TCF4-228ENST00000565393 PIK3R5Q8WYR1 880 aa7.03□□□□□ -1.28
TCF4-228ENST00000565393 CALML4Q96GE6 196 aa7.03□□□□□ -1.28
TCF4-228ENST00000565393 ZBTB45Q96K62 511 aaPredicted RBP7.03□□□□□ -1.28
TCF4-228ENST00000565393 UROC1Q96N76 676 aa7.03□□□□□ -1.28
TCF4-228ENST00000565393 PNMA5Q96PV4 448 aa7.03□□□□□ -1.28
TCF4-228ENST00000565393 MMTAG2Q9BU76 263 aaKnown RBP7.03□□□□□ -1.28
TCF4-228ENST00000565393 TIPINQ9BVW5 301 aa7.03□□□□□ -1.28
TCF4-228ENST00000565393 CDT1Q9H211 546 aa7.03□□□□□ -1.28
TCF4-228ENST00000565393 C17orf75Q9HAS0 396 aa7.03□□□□□ -1.28
TCF4-228ENST00000565393 GOLGA2P5Q9HBQ8 144 aa7.03□□□□□ -1.28
TCF4-228ENST00000565393 SLC38A7Q9NVC3 462 aa7.03□□□□□ -1.28
TCF4-228ENST00000565393 ZDHHC7Q9NXF8 308 aa7.03□□□□□ -1.28
TCF4-228ENST00000565393 IGSF9Q9P2J2 1179 aa7.03□□□□□ -1.28
TCF4-228ENST00000565393 LARSQ9P2J5 1176 aaKnown RBP7.03□□□□□ -1.28
TCF4-228ENST00000565393 NUB1Q9Y5A7 615 aa7.03□□□□□ -1.28
TCF4-228ENST00000565393 CLUHO75153 1309 aa7.02□□□□□ -1.28
TCF4-228ENST00000565393 NLRC5Q86WI3 1866 aa7.02□□□□□ -1.28
TCF4-228ENST00000565393 EVPLQ92817 2033 aa7.02□□□□□ -1.29
TCF4-228ENST00000565393 CCL16O15467 120 aa7.02□□□□□ -1.29
TCF4-228ENST00000565393 CLDN3O15551 220 aa7.02□□□□□ -1.29
TCF4-228ENST00000565393 ADAM12O43184 909 aa7.02□□□□□ -1.29
TCF4-228ENST00000565393 XYLBO75191 536 aa7.02□□□□□ -1.29
TCF4-228ENST00000565393 C8AP07357 584 aa7.02□□□□□ -1.29
TCF4-228ENST00000565393 HNRNPA1P09651 372 aaKnown RBP eCLIP7.02□□□□□ -1.29
TCF4-228ENST00000565393 FGFR3P22607 806 aa7.02□□□□□ -1.29
TCF4-228ENST00000565393 GUCY2CP25092 1073 aa7.02□□□□□ -1.29
TCF4-228ENST00000565393 MARCKSP29966 332 aaPredicted RBP7.02□□□□□ -1.29
TCF4-228ENST00000565393 ELF1P32519 619 aa7.02□□□□□ -1.29
TCF4-228ENST00000565393 TCF15Q12870 199 aa7.02□□□□□ -1.29
TCF4-228ENST00000565393 MAPK7Q13164 816 aa7.02□□□□□ -1.29
TCF4-228ENST00000565393 RAB33AQ14088 237 aa7.02□□□□□ -1.29
TCF4-228ENST00000565393 UPP1Q16831 310 aa7.02□□□□□ -1.29
TCF4-228ENST00000565393 UVSSAQ2YD98 709 aa7.02□□□□□ -1.29
TCF4-228ENST00000565393 AXDND1Q5T1B0 1012 aaPredicted RBP7.02□□□□□ -1.29
TCF4-228ENST00000565393 ARL6IP4Q66PJ3 421 aaKnown RBP7.02□□□□□ -1.29
TCF4-228ENST00000565393 ASTLQ6HA08 431 aaPredicted RBP7.02□□□□□ -1.29
TCF4-228ENST00000565393 MPZL3Q6UWV2 235 aa7.02□□□□□ -1.29
TCF4-228ENST00000565393 ALKAL1Q6UXT8 129 aa7.02□□□□□ -1.29
TCF4-228ENST00000565393 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.02□□□□□ -1.29
TCF4-228ENST00000565393 ANKS3Q6ZW76 656 aa7.02□□□□□ -1.29
TCF4-228ENST00000565393 GET4Q7L5D6 327 aaPredicted RBP7.02□□□□□ -1.29
TCF4-228ENST00000565393 HAUS6Q7Z4H7 955 aa7.02□□□□□ -1.29
TCF4-228ENST00000565393 SIX5Q8N196 739 aa7.02□□□□□ -1.29
TCF4-228ENST00000565393 CEP120Q8N960 986 aa7.02□□□□□ -1.29
TCF4-228ENST00000565393 SPIRE2Q8WWL2 714 aa7.02□□□□□ -1.29
TCF4-228ENST00000565393 ZNF707Q96C28 371 aaPredicted RBP7.02□□□□□ -1.29
TCF4-228ENST00000565393 FAM212AQ96EL1 285 aa7.02□□□□□ -1.29
TCF4-228ENST00000565393 BICD1Q96G01 975 aa7.02□□□□□ -1.29
TCF4-228ENST00000565393 PPP1R10Q96QC0 940 aaKnown RBP7.02□□□□□ -1.29
TCF4-228ENST00000565393 MYADMQ96S97 322 aa7.02□□□□□ -1.29
TCF4-228ENST00000565393 PHOX2BQ99453 314 aa7.02□□□□□ -1.29
TCF4-228ENST00000565393 PTPRHQ9HD43 1115 aa7.02□□□□□ -1.29
TCF4-228ENST00000565393 FAM86C1Q9NVL1 165 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms