RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 SRFP11831 508 aa9.46□□□□□ -0.9
CAPN3-213ENST00000565173 U2AF2P26368 475 aaKnown RBP eCLIP9.46□□□□□ -0.9
CAPN3-213ENST00000565173 TRAPPC10P48553 1259 aa9.46□□□□□ -0.9
CAPN3-213ENST00000565173 EFNA5P52803 228 aa9.46□□□□□ -0.9
CAPN3-213ENST00000565173 NTHL1P78549 312 aa9.46□□□□□ -0.9
CAPN3-213ENST00000565173 CREMQ03060 361 aa9.46□□□□□ -0.9
CAPN3-213ENST00000565173 HTR4Q13639 388 aa9.46□□□□□ -0.9
CAPN3-213ENST00000565173 IL17AQ16552 155 aa9.46□□□□□ -0.9
CAPN3-213ENST00000565173 ATF7IP2Q5U623 682 aa9.46□□□□□ -0.9
CAPN3-213ENST00000565173 ALKAL1Q6UXT8 129 aa9.46□□□□□ -0.9
CAPN3-213ENST00000565173 CCDC105Q8IYK2 499 aa9.46□□□□□ -0.9
CAPN3-213ENST00000565173 DAW1Q8N136 415 aa9.46□□□□□ -0.9
CAPN3-213ENST00000565173 IGSF22Q8N9C0 903 aa9.46□□□□□ -0.9
CAPN3-213ENST00000565173 DTWD2Q8NBA8 298 aa9.46□□□□□ -0.9
CAPN3-213ENST00000565173 PPP1R10Q96QC0 940 aaKnown RBP9.46□□□□□ -0.9
CAPN3-213ENST00000565173 RTP3Q9BQQ7 232 aa9.46□□□□□ -0.9
CAPN3-213ENST00000565173 RPP25Q9BUL9 199 aaKnown RBP9.46□□□□□ -0.9
CAPN3-213ENST00000565173 PIDD1Q9HB75 910 aa9.46□□□□□ -0.9
CAPN3-213ENST00000565173 PTPRHQ9HD43 1115 aa9.46□□□□□ -0.9
CAPN3-213ENST00000565173 FBXW11Q9UKB1 542 aa9.46□□□□□ -0.9
CAPN3-213ENST00000565173 FBXL21Q9UKT6 434 aa9.46□□□□□ -0.9
CAPN3-213ENST00000565173 KIAA1024Q9UPX6 916 aa9.46□□□□□ -0.9
CAPN3-213ENST00000565173 GDAQ9Y2T3 454 aa9.46□□□□□ -0.9
CAPN3-213ENST00000565173 DOCK6Q96HP0 2047 aa9.45□□□□□ -0.9
CAPN3-213ENST00000565173 PRR23AA6NEV1 266 aa9.45□□□□□ -0.9
CAPN3-213ENST00000565173 TMEM189-UBE2V1I3L0A0 370 aa9.45□□□□□ -0.9
CAPN3-213ENST00000565173 EIF5BO60841 1220 aaKnown RBP9.45□□□□□ -0.9
CAPN3-213ENST00000565173 FGFR3P22607 806 aa9.45□□□□□ -0.9
CAPN3-213ENST00000565173 FSHRP23945 695 aa9.45□□□□□ -0.9
CAPN3-213ENST00000565173 CCT6AP40227 531 aaKnown RBP9.45□□□□□ -0.9
CAPN3-213ENST00000565173 CLCNKBP51801 687 aa9.45□□□□□ -0.9
CAPN3-213ENST00000565173 RAB33AQ14088 237 aa9.45□□□□□ -0.9
CAPN3-213ENST00000565173 PPP2R5AQ15172 486 aa9.45□□□□□ -0.9
CAPN3-213ENST00000565173 PSMD5Q16401 504 aa9.45□□□□□ -0.9
CAPN3-213ENST00000565173 UPP1Q16831 310 aa9.45□□□□□ -0.9
CAPN3-213ENST00000565173 DCAF4L1Q3SXM0 396 aa9.45□□□□□ -0.9
CAPN3-213ENST00000565173 XKR4Q5GH76 650 aa9.45□□□□□ -0.9
CAPN3-213ENST00000565173 DCLRE1AQ6PJP8 1040 aa9.45□□□□□ -0.9
CAPN3-213ENST00000565173 RSPO2Q6UXX9 243 aaPredicted RBP9.45□□□□□ -0.9
CAPN3-213ENST00000565173 GET4Q7L5D6 327 aaPredicted RBP9.45□□□□□ -0.9
CAPN3-213ENST00000565173 TAS1R3Q7RTX0 852 aa9.45□□□□□ -0.9
CAPN3-213ENST00000565173 GRASPQ7Z6J2 395 aaPredicted RBP9.45□□□□□ -0.9
CAPN3-213ENST00000565173 FRMD5Q7Z6J6 570 aa9.45□□□□□ -0.9
CAPN3-213ENST00000565173 CEP57Q86XR8 500 aa9.45□□□□□ -0.9
CAPN3-213ENST00000565173 C3orf58Q8NDZ4 430 aa9.45□□□□□ -0.9
CAPN3-213ENST00000565173 ST13P5Q8NFI4 369 aaPredicted RBP9.45□□□□□ -0.9
CAPN3-213ENST00000565173 DEPTORQ8TB45 409 aa9.45□□□□□ -0.9
CAPN3-213ENST00000565173 GPR152Q8TDT2 470 aa9.45□□□□□ -0.9
CAPN3-213ENST00000565173 KIFAP3Q92845 792 aa9.45□□□□□ -0.9
CAPN3-213ENST00000565173 IFT74Q96LB3 600 aa9.45□□□□□ -0.9
CAPN3-213ENST00000565173 ACO2Q99798 780 aaKnown RBP9.45□□□□□ -0.9
CAPN3-213ENST00000565173 ADPGKQ9BRR6 497 aa9.45□□□□□ -0.9
CAPN3-213ENST00000565173 DDX19AQ9NUU7 478 aaKnown RBP9.45□□□□□ -0.9
CAPN3-213ENST00000565173 DAXXQ9UER7 740 aaPredicted RBP9.45□□□□□ -0.9
CAPN3-213ENST00000565173 LRWD1Q9UFC0 647 aa9.45□□□□□ -0.9
CAPN3-213ENST00000565173 TNFSF13BQ9Y275 285 aa9.45□□□□□ -0.9
CAPN3-213ENST00000565173 PCDHB6Q9Y5E3 794 aa9.45□□□□□ -0.9
CAPN3-213ENST00000565173 NUMBLQ9Y6R0 609 aa9.45□□□□□ -0.9
CAPN3-213ENST00000565173 VWA8A3KMH1 1905 aa9.44□□□□□ -0.9
CAPN3-213ENST00000565173 RIF1Q5UIP0 2472 aaKnown RBP9.44□□□□□ -0.9
CAPN3-213ENST00000565173 SPTBN4Q9H254 2564 aa9.44□□□□□ -0.9
CAPN3-213ENST00000565173 SMIM28A0A1B0GU29 152 aa9.44□□□□□ -0.9
CAPN3-213ENST00000565173 PP2D1A8MPX8 630 aa9.44□□□□□ -0.9
CAPN3-213ENST00000565173 E9PMD0 336 aa9.44□□□□□ -0.9
CAPN3-213ENST00000565173 K7ERI5 159 aa9.44□□□□□ -0.9
CAPN3-213ENST00000565173 ABLIM1O14639 778 aa9.44□□□□□ -0.9
CAPN3-213ENST00000565173 MEFVO15553 781 aaPredicted RBP9.44□□□□□ -0.9
CAPN3-213ENST00000565173 C8AP07357 584 aa9.44□□□□□ -0.9
CAPN3-213ENST00000565173 POU2F2P09086 479 aa9.44□□□□□ -0.9
CAPN3-213ENST00000565173 HNRNPA1P09651 372 aaKnown RBP eCLIP9.44□□□□□ -0.9
CAPN3-213ENST00000565173 LIG1P18858 919 aa9.44□□□□□ -0.9
CAPN3-213ENST00000565173 HOXA9P31269 272 aa9.44□□□□□ -0.9
CAPN3-213ENST00000565173 OR1D2P34982 312 aa9.44□□□□□ -0.9
CAPN3-213ENST00000565173 NPTX2P47972 431 aa9.44□□□□□ -0.9
CAPN3-213ENST00000565173 HMGN5P82970 282 aaKnown RBP9.44□□□□□ -0.9
CAPN3-213ENST00000565173 SOX4Q06945 474 aaPredicted RBP9.44□□□□□ -0.9
CAPN3-213ENST00000565173 ELAVL2Q12926 359 aaKnown RBP9.44□□□□□ -0.9
CAPN3-213ENST00000565173 MAPK7Q13164 816 aa9.44□□□□□ -0.9
CAPN3-213ENST00000565173 PTGDRQ13258 359 aa9.44□□□□□ -0.9
CAPN3-213ENST00000565173 ANGPT1Q15389 498 aa9.44□□□□□ -0.9
CAPN3-213ENST00000565173 TMEM132AQ24JP5 1023 aa9.44□□□□□ -0.9
CAPN3-213ENST00000565173 GLRA4Q5JXX5 417 aa9.44□□□□□ -0.9
CAPN3-213ENST00000565173 HAUS3Q68CZ6 603 aa9.44□□□□□ -0.9
CAPN3-213ENST00000565173 PHLDB3Q6NSJ2 640 aa9.44□□□□□ -0.9
CAPN3-213ENST00000565173 PDXDC1Q6P996 788 aa9.44□□□□□ -0.9
CAPN3-213ENST00000565173 POTEHQ6S545 545 aa9.44□□□□□ -0.9
CAPN3-213ENST00000565173 PARM1Q6UWI2 310 aa9.44□□□□□ -0.9
CAPN3-213ENST00000565173 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.44□□□□□ -0.9
CAPN3-213ENST00000565173 CEP120Q8N960 986 aa9.44□□□□□ -0.9
CAPN3-213ENST00000565173 FGF14Q92915 247 aa9.44□□□□□ -0.9
CAPN3-213ENST00000565173 ZSCAN31Q96LW9 406 aaPredicted RBP9.44□□□□□ -0.9
CAPN3-213ENST00000565173 ZMAT2Q96NC0 199 aaKnown RBP9.44□□□□□ -0.9
CAPN3-213ENST00000565173 MMTAG2Q9BU76 263 aaKnown RBP9.44□□□□□ -0.9
CAPN3-213ENST00000565173 TMEM134Q9H6X4 195 aa9.44□□□□□ -0.9
CAPN3-213ENST00000565173 SLC2A4RGQ9NR83 387 aa9.44□□□□□ -0.9
CAPN3-213ENST00000565173 SH2B1Q9NRF2 756 aaPredicted RBP9.44□□□□□ -0.9
CAPN3-213ENST00000565173 DLGAP2Q9P1A6 1054 aa9.44□□□□□ -0.9
CAPN3-213ENST00000565173 MTRRQ9UBK8 725 aa9.44□□□□□ -0.9
CAPN3-213ENST00000565173 CDH7Q9ULB5 785 aa9.44□□□□□ -0.9
CAPN3-213ENST00000565173 CA14Q9ULX7 337 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms