RNA–Protein interactions for RNA: ENST00000565119.1

CHD9-214, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 824 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-214ENST00000565119 SPATA31D4Q6ZUB0 917 aa5.79□□□□□ -1.48
CHD9-214ENST00000565119 GPR149Q86SP6 731 aa5.79□□□□□ -1.48
CHD9-214ENST00000565119 CKAP2LQ8IYA6 745 aa5.79□□□□□ -1.48
CHD9-214ENST00000565119 ZNF700Q9H0M5 742 aa5.79□□□□□ -1.48
CHD9-214ENST00000565119 MAP3K20Q9NYL2 800 aaKnown RBP5.79□□□□□ -1.48
CHD9-214ENST00000565119 ANAPC4Q9UJX5 808 aa5.79□□□□□ -1.48
CHD9-214ENST00000565119 CAND2O75155 1236 aa5.78□□□□□ -1.48
CHD9-214ENST00000565119 CYP17A1P05093 508 aa5.78□□□□□ -1.48
CHD9-214ENST00000565119 MAPRE1Q15691 268 aaKnown RBP5.78□□□□□ -1.48
CHD9-214ENST00000565119 ZRSR2Q15696 482 aaKnown RBP5.78□□□□□ -1.48
CHD9-214ENST00000565119 ARHGAP44Q17R89 818 aa5.78□□□□□ -1.48
CHD9-214ENST00000565119 TRIM61Q5EBN2 209 aa5.78□□□□□ -1.48
CHD9-214ENST00000565119 ANKS6Q68DC2 871 aa5.78□□□□□ -1.48
CHD9-214ENST00000565119 Q6ZNX1 250 aa5.78□□□□□ -1.48
CHD9-214ENST00000565119 NME9Q86XW9 330 aa5.78□□□□□ -1.48
CHD9-214ENST00000565119 PPM1EQ8WY54 764 aa5.78□□□□□ -1.48
CHD9-214ENST00000565119 SECISBP2LQ93073 1101 aaKnown RBP5.78□□□□□ -1.48
CHD9-214ENST00000565119 NEU1Q99519 415 aa5.78□□□□□ -1.48
CHD9-214ENST00000565119 KCNG1Q9UIX4 513 aa5.78□□□□□ -1.48
CHD9-214ENST00000565119 USP15Q9Y4E8 981 aaPredicted RBP5.78□□□□□ -1.48
CHD9-214ENST00000565119 WIPF3A6NGB9 483 aa5.77□□□□□ -1.49
CHD9-214ENST00000565119 CDKL5O76039 1030 aa5.77□□□□□ -1.49
CHD9-214ENST00000565119 PRPF6O94906 941 aaKnown RBP5.77□□□□□ -1.49
CHD9-214ENST00000565119 ZRANB2O95218 330 aaKnown RBP eCLIP5.77□□□□□ -1.49
CHD9-214ENST00000565119 LY86O95711 162 aa5.77□□□□□ -1.49
CHD9-214ENST00000565119 FOSP01100 380 aaPredicted RBP5.77□□□□□ -1.49
CHD9-214ENST00000565119 HLTFQ14527 1009 aaKnown RBP eCLIP5.77□□□□□ -1.493e-7■□□□□ 10.9
CHD9-214ENST00000565119 ICE2Q659A1 982 aa5.77□□□□□ -1.49
CHD9-214ENST00000565119 ZNF788Q6ZQV5 615 aa5.77□□□□□ -1.49
CHD9-214ENST00000565119 FGD2Q7Z6J4 655 aa5.77□□□□□ -1.49
CHD9-214ENST00000565119 MSL3Q8N5Y2 521 aaKnown RBP5.77□□□□□ -1.49
CHD9-214ENST00000565119 SVIPQ8NHG7 77 aa5.77□□□□□ -1.49
CHD9-214ENST00000565119 ZBTB9Q96C00 473 aa5.77□□□□□ -1.49
CHD9-214ENST00000565119 PAGR1Q9BTK6 254 aa5.77□□□□□ -1.49
CHD9-214ENST00000565119 MYL10Q9BUA6 226 aa5.77□□□□□ -1.49
CHD9-214ENST00000565119 PCIF1Q9H4Z3 704 aa5.77□□□□□ -1.49
CHD9-214ENST00000565119 APOL3O95236 402 aa5.76□□□□□ -1.49
CHD9-214ENST00000565119 CFIP05156 583 aa5.76□□□□□ -1.49
CHD9-214ENST00000565119 RBP3P10745 1247 aa5.76□□□□□ -1.49
CHD9-214ENST00000565119 DUSP2Q05923 314 aa5.76□□□□□ -1.49
CHD9-214ENST00000565119 LMOD3Q0VAK6 560 aa5.76□□□□□ -1.49
CHD9-214ENST00000565119 RASGRF1Q13972 1273 aa5.76□□□□□ -1.49
CHD9-214ENST00000565119 KIAA1841Q6NSI8 718 aa5.76□□□□□ -1.49
CHD9-214ENST00000565119 KIAA1958Q8N8K9 716 aa5.76□□□□□ -1.49
CHD9-214ENST00000565119 RNF169Q8NCN4 708 aa5.76□□□□□ -1.49
CHD9-214ENST00000565119 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.76□□□□□ -1.49
CHD9-214ENST00000565119 PDLIM2Q96JY6 352 aa5.76□□□□□ -1.49
CHD9-214ENST00000565119 HIST1H2AHQ96KK5 128 aa5.76□□□□□ -1.49
CHD9-214ENST00000565119 HIST1H2AJQ99878 128 aa5.76□□□□□ -1.49
CHD9-214ENST00000565119 ALOXE3Q9BYJ1 711 aa5.76□□□□□ -1.49
CHD9-214ENST00000565119 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.76□□□□□ -1.49
CHD9-214ENST00000565119 SIRPGQ9P1W8 387 aa5.76□□□□□ -1.49
CHD9-214ENST00000565119 CDC45O75419 566 aa5.75□□□□□ -1.49
CHD9-214ENST00000565119 EXOSC10Q01780 885 aaKnown RBP5.75□□□□□ -1.49
CHD9-214ENST00000565119 ARMC6Q6NXE6 501 aa5.75□□□□□ -1.49
CHD9-214ENST00000565119 ESRP1Q6NXG1 681 aaKnown RBP5.75□□□□□ -1.49
CHD9-214ENST00000565119 CCDC174Q6PII3 467 aa5.75□□□□□ -1.49
CHD9-214ENST00000565119 KIAA0907Q7Z7F0 614 aaPredicted RBP5.75□□□□□ -1.49
CHD9-214ENST00000565119 RUNDC1Q96C34 613 aa5.75□□□□□ -1.49
CHD9-214ENST00000565119 TRIM55Q9BYV6 548 aa5.75□□□□□ -1.49
CHD9-214ENST00000565119 POFUT1Q9H488 388 aa5.75□□□□□ -1.49
CHD9-214ENST00000565119 ARNT2Q9HBZ2 717 aa5.75□□□□□ -1.49
CHD9-214ENST00000565119 HOMER2Q9NSB8 354 aa5.75□□□□□ -1.49
CHD9-214ENST00000565119 POGKQ9P215 609 aa5.75□□□□□ -1.49
CHD9-214ENST00000565119 ARPP21Q9UBL0 812 aaPredicted RBP5.75□□□□□ -1.49
CHD9-214ENST00000565119 M0R2C6 588 aa5.74□□□□□ -1.49
CHD9-214ENST00000565119 RAPGEF1Q13905 1077 aa5.74□□□□□ -1.49
CHD9-214ENST00000565119 NFE2Q16621 373 aaPredicted RBP5.74□□□□□ -1.49
CHD9-214ENST00000565119 LONRF2Q1L5Z9 754 aa5.74□□□□□ -1.49
CHD9-214ENST00000565119 TIGD7Q6NT04 549 aaPredicted RBP5.74□□□□□ -1.49
CHD9-214ENST00000565119 EFCAB12Q6NXP0 572 aa5.74□□□□□ -1.49
CHD9-214ENST00000565119 CRELD2Q6UXH1 353 aaPredicted RBP5.74□□□□□ -1.49
CHD9-214ENST00000565119 TAS1R1Q7RTX1 841 aa5.74□□□□□ -1.49
CHD9-214ENST00000565119 DDB2Q92466 427 aa5.74□□□□□ -1.49
CHD9-214ENST00000565119 MPHOSPH6Q99547 160 aaKnown RBP5.74□□□□□ -1.49
CHD9-214ENST00000565119 TMX4Q9H1E5 349 aaPredicted RBP5.74□□□□□ -1.49
CHD9-214ENST00000565119 ASB6Q9NWX5 421 aa5.74□□□□□ -1.49
CHD9-214ENST00000565119 SLC17A6Q9P2U8 582 aa5.74□□□□□ -1.49
CHD9-214ENST00000565119 ZMYM3Q14202 1370 aa5.73□□□□□ -1.49
CHD9-214ENST00000565119 TRIM38O00635 465 aa5.73□□□□□ -1.49
CHD9-214ENST00000565119 TIMM44O43615 452 aa5.73□□□□□ -1.49
CHD9-214ENST00000565119 KRT18P05783 430 aaKnown RBP5.73□□□□□ -1.49
CHD9-214ENST00000565119 VDRP11473 427 aa5.73□□□□□ -1.49
CHD9-214ENST00000565119 MGAT1P26572 445 aa5.73□□□□□ -1.49
CHD9-214ENST00000565119 MXRA7P84157 204 aa5.73□□□□□ -1.49
CHD9-214ENST00000565119 TMEM95Q3KNT9 176 aa5.73□□□□□ -1.49
CHD9-214ENST00000565119 PHYKPLQ8IUZ5 450 aa5.73□□□□□ -1.49
CHD9-214ENST00000565119 C7orf31Q8N865 590 aa5.73□□□□□ -1.49
CHD9-214ENST00000565119 C1orf131Q8NDD1 294 aaKnown RBP5.73□□□□□ -1.49
CHD9-214ENST00000565119 MTFR1LQ9H019 292 aa5.73□□□□□ -1.49
CHD9-214ENST00000565119 IL17RBQ9NRM6 502 aa5.73□□□□□ -1.49
CHD9-214ENST00000565119 ZNF69Q9UC07 566 aa5.73□□□□□ -1.49
CHD9-214ENST00000565119 RPGRIP1LQ68CZ1 1315 aa5.73□□□□□ -1.49
CHD9-214ENST00000565119 TBKBP1A7MCY6 615 aa5.72□□□□□ -1.49
CHD9-214ENST00000565119 TSPAN6O43657 245 aa5.72□□□□□ -1.49
CHD9-214ENST00000565119 PCDH8O95206 1070 aa5.72□□□□□ -1.49
CHD9-214ENST00000565119 MYL1P05976 194 aa5.72□□□□□ -1.49
CHD9-214ENST00000565119 CELA2AP08217 269 aa5.72□□□□□ -1.49
CHD9-214ENST00000565119 ELANEP08246 267 aa5.72□□□□□ -1.49
CHD9-214ENST00000565119 FAM163BP0C2L3 166 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms