RNA–Protein interactions for RNA: ENST00000564770.1

CDH11-210, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 425 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-210ENST00000564770 RPP25Q9BUL9 199 aaKnown RBP17.56■□□□□ 0.4
CDH11-210ENST00000564770 C2orf40Q9H1Z8 148 aa17.56■□□□□ 0.4
CDH11-210ENST00000564770 POLD4Q9HCU8 107 aa17.56■□□□□ 0.4
CDH11-210ENST00000564770 ARHGEF3Q9NR81 526 aa17.56■□□□□ 0.4
CDH11-210ENST00000564770 CACNA1AO00555 2505 aa17.55■□□□□ 0.4
CDH11-210ENST00000564770 C8AP07357 584 aa17.55■□□□□ 0.4
CDH11-210ENST00000564770 LIG1P18858 919 aa17.55■□□□□ 0.4
CDH11-210ENST00000564770 RPA1P27694 616 aa17.55■□□□□ 0.4
CDH11-210ENST00000564770 ECM1Q16610 540 aa17.55■□□□□ 0.4
CDH11-210ENST00000564770 MAPK6Q16659 721 aa17.55■□□□□ 0.4
CDH11-210ENST00000564770 GLRA4Q5JXX5 417 aa17.55■□□□□ 0.4
CDH11-210ENST00000564770 NXPE3Q969Y0 559 aa17.55■□□□□ 0.4
CDH11-210ENST00000564770 NACC1Q96RE7 527 aa17.55■□□□□ 0.4
CDH11-210ENST00000564770 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.55■□□□□ 0.4
CDH11-210ENST00000564770 MYH11P35749 1972 aa17.55■□□□□ 0.4
CDH11-210ENST00000564770 EP300Q09472 2414 aaPredicted RBP17.55■□□□□ 0.4
CDH11-210ENST00000564770 CACNA1IQ9P0X4 2223 aa17.54■□□□□ 0.4
CDH11-210ENST00000564770 ARHGEF35A5YM69 484 aa17.54■□□□□ 0.4
CDH11-210ENST00000564770 ACKR2O00590 384 aa17.54■□□□□ 0.4
CDH11-210ENST00000564770 THP07101 528 aa17.54■□□□□ 0.4
CDH11-210ENST00000564770 CYP11B2P19099 503 aa17.54■□□□□ 0.4
CDH11-210ENST00000564770 FSHRP23945 695 aa17.54■□□□□ 0.4
CDH11-210ENST00000564770 NAMPTP43490 491 aa17.54■□□□□ 0.4
CDH11-210ENST00000564770 ZNF174Q15697 407 aa17.54■□□□□ 0.4
CDH11-210ENST00000564770 TMEM132AQ24JP5 1023 aa17.54■□□□□ 0.4
CDH11-210ENST00000564770 LIN9Q5TKA1 542 aa17.54■□□□□ 0.4
CDH11-210ENST00000564770 PARM1Q6UWI2 310 aa17.54■□□□□ 0.4
CDH11-210ENST00000564770 CEP57Q86XR8 500 aa17.54■□□□□ 0.4
CDH11-210ENST00000564770 C3orf58Q8NDZ4 430 aa17.54■□□□□ 0.4
CDH11-210ENST00000564770 DLGAP2Q9P1A6 1054 aa17.54■□□□□ 0.4
CDH11-210ENST00000564770 GDAQ9Y2T3 454 aa17.54■□□□□ 0.4
CDH11-210ENST00000564770 COL4A2P08572 1712 aa17.54■□□□□ 0.4
CDH11-210ENST00000564770 STK25O00506 426 aa17.53■□□□□ 0.4
CDH11-210ENST00000564770 CCL16O15467 120 aa17.53■□□□□ 0.4
CDH11-210ENST00000564770 DCNP07585 359 aaKnown RBP17.53■□□□□ 0.4
CDH11-210ENST00000564770 NBR1Q14596 966 aa17.53■□□□□ 0.4
CDH11-210ENST00000564770 SPECC1Q5M775 1068 aa17.53■□□□□ 0.4
CDH11-210ENST00000564770 NT5DC1Q5TFE4 455 aa17.53■□□□□ 0.4
CDH11-210ENST00000564770 CD300LGQ6UXG3 332 aa17.53■□□□□ 0.4
CDH11-210ENST00000564770 RSPO2Q6UXX9 243 aaPredicted RBP17.53■□□□□ 0.4
CDH11-210ENST00000564770 ADSSL1Q8N142 457 aa17.53■□□□□ 0.4
CDH11-210ENST00000564770 CEP120Q8N960 986 aa17.53■□□□□ 0.4
CDH11-210ENST00000564770 DEPTORQ8TB45 409 aa17.53■□□□□ 0.4
CDH11-210ENST00000564770 SLC7A14Q8TBB6 771 aa17.53■□□□□ 0.4
CDH11-210ENST00000564770 PPP1R10Q96QC0 940 aaKnown RBP17.53■□□□□ 0.4
CDH11-210ENST00000564770 ADPGKQ9BRR6 497 aa17.53■□□□□ 0.4
CDH11-210ENST00000564770 FOXQ1Q9C009 403 aa17.53■□□□□ 0.4
CDH11-210ENST00000564770 GOLGA2P5Q9HBQ8 144 aa17.53■□□□□ 0.4
CDH11-210ENST00000564770 SLC2A4RGQ9NR83 387 aa17.53■□□□□ 0.4
CDH11-210ENST00000564770 OTOGLQ3ZCN5 2332 aa17.53■□□□□ 0.4
CDH11-210ENST00000564770 LRRN2O75325 713 aa17.52■□□□□ 0.4
CDH11-210ENST00000564770 SEC24BO95487 1268 aa17.52■□□□□ 0.4
CDH11-210ENST00000564770 HNRNPA1P09651 372 aaKnown RBP eCLIP17.52■□□□□ 0.4
CDH11-210ENST00000564770 GLULP15104 373 aa17.52■□□□□ 0.4
CDH11-210ENST00000564770 FGFR3P22607 806 aa17.52■□□□□ 0.4
CDH11-210ENST00000564770 HOXA9P31269 272 aa17.52■□□□□ 0.4
CDH11-210ENST00000564770 CLCNKBP51801 687 aa17.52■□□□□ 0.4
CDH11-210ENST00000564770 DCAF4L1Q3SXM0 396 aa17.52■□□□□ 0.4
CDH11-210ENST00000564770 PPM1LQ5SGD2 360 aa17.52■□□□□ 0.4
CDH11-210ENST00000564770 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.52■□□□□ 0.4
CDH11-210ENST00000564770 CCDC83Q8IWF9 413 aa17.52■□□□□ 0.4
CDH11-210ENST00000564770 ERMNQ8TAM6 284 aa17.52■□□□□ 0.4
CDH11-210ENST00000564770 ITFG1Q8TB96 612 aa17.52■□□□□ 0.4
CDH11-210ENST00000564770 C8orf76Q96K31 380 aa17.52■□□□□ 0.4
CDH11-210ENST00000564770 HCFC1R1Q9NWW0 138 aa17.52■□□□□ 0.4
CDH11-210ENST00000564770 MTRRQ9UBK8 725 aa17.52■□□□□ 0.4
CDH11-210ENST00000564770 CDH7Q9ULB5 785 aa17.52■□□□□ 0.4
CDH11-210ENST00000564770 TMEM189-UBE2V1I3L0A0 370 aa17.51■□□□□ 0.39
CDH11-210ENST00000564770 I3L4J1 428 aa17.51■□□□□ 0.39
CDH11-210ENST00000564770 RFX1P22670 979 aa17.51■□□□□ 0.39
CDH11-210ENST00000564770 TKTP29401 623 aaKnown RBP17.51■□□□□ 0.39
CDH11-210ENST00000564770 SOX4Q06945 474 aaPredicted RBP17.51■□□□□ 0.39
CDH11-210ENST00000564770 ELAVL2Q12926 359 aaKnown RBP17.51■□□□□ 0.39
CDH11-210ENST00000564770 ORC2Q13416 577 aaPredicted RBP17.51■□□□□ 0.39
CDH11-210ENST00000564770 SAFBQ15424 915 aaKnown RBP eCLIP17.51■□□□□ 0.39
CDH11-210ENST00000564770 TTC38Q5R3I4 469 aa17.51■□□□□ 0.39
CDH11-210ENST00000564770 HAUS3Q68CZ6 603 aa17.51■□□□□ 0.39
CDH11-210ENST00000564770 PHLDB3Q6NSJ2 640 aa17.51■□□□□ 0.39
CDH11-210ENST00000564770 C4orf32Q8N8J7 132 aa17.51■□□□□ 0.39
CDH11-210ENST00000564770 FGF13Q92913 245 aa17.51■□□□□ 0.39
CDH11-210ENST00000564770 DDX27Q96GQ7 796 aaKnown RBP17.51■□□□□ 0.39
CDH11-210ENST00000564770 BHMT2Q9H2M3 363 aa17.51■□□□□ 0.39
CDH11-210ENST00000564770 FOXP1Q9H334 677 aaPredicted RBP17.51■□□□□ 0.39
CDH11-210ENST00000564770 POLIQ9UNA4 740 aa17.51■□□□□ 0.39
CDH11-210ENST00000564770 ZFP37Q9Y6Q3 630 aaPredicted RBP17.51■□□□□ 0.39
CDH11-210ENST00000564770 R4GN57 208 aa17.51■□□□□ 0.39
CDH11-210ENST00000564770 OR1D2P34982 312 aa17.5■□□□□ 0.39
CDH11-210ENST00000564770 RBM25P49756 843 aaKnown RBP17.5■□□□□ 0.39
CDH11-210ENST00000564770 FXR2P51116 673 aaKnown RBP eCLIP17.5■□□□□ 0.39
CDH11-210ENST00000564770 GPC5P78333 572 aa17.5■□□□□ 0.39
CDH11-210ENST00000564770 RAB33AQ14088 237 aa17.5■□□□□ 0.39
CDH11-210ENST00000564770 PPP2R5AQ15172 486 aa17.5■□□□□ 0.39
CDH11-210ENST00000564770 AXDND1Q5T1B0 1012 aaPredicted RBP17.5■□□□□ 0.39
CDH11-210ENST00000564770 ATF7IP2Q5U623 682 aa17.5■□□□□ 0.39
CDH11-210ENST00000564770 DCLRE1AQ6PJP8 1040 aa17.5■□□□□ 0.39
CDH11-210ENST00000564770 NPAS3Q8IXF0 933 aa17.5■□□□□ 0.39
CDH11-210ENST00000564770 PJA1Q8NG27 643 aa17.5■□□□□ 0.39
CDH11-210ENST00000564770 CDY1Q9Y6F8 540 aa17.5■□□□□ 0.39
CDH11-210ENST00000564770 PHLPP2Q6ZVD8 1323 aa17.49■□□□□ 0.39
CDH11-210ENST00000564770 B3GAT3O94766 335 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms