RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 GBP2P32456 591 aaPredicted RBP20.35■□□□□ 0.85
CLN6-204ENST00000564752 NT5DC1Q5TFE4 455 aa20.35■□□□□ 0.85
CLN6-204ENST00000564752 KRT79Q5XKE5 535 aa20.35■□□□□ 0.85
CLN6-204ENST00000564752 HASPINQ8TF76 798 aa20.35■□□□□ 0.85
CLN6-204ENST00000564752 MYADMQ96S97 322 aa20.35■□□□□ 0.85
CLN6-204ENST00000564752 CLSTN3Q9BQT9 956 aa20.35■□□□□ 0.85
CLN6-204ENST00000564752 TTPALQ9BTX7 342 aa20.35■□□□□ 0.85
CLN6-204ENST00000564752 KIFC3Q9BVG8 833 aa20.35■□□□□ 0.85
CLN6-204ENST00000564752 DDX19AQ9NUU7 478 aaKnown RBP20.35■□□□□ 0.85
CLN6-204ENST00000564752 DENND4AQ7Z401 1863 aa20.35■□□□□ 0.85
CLN6-204ENST00000564752 ZFHX2Q9C0A1 2572 aaPredicted RBP20.35■□□□□ 0.85
CLN6-204ENST00000564752 TDRD15B5MCY1 1934 aaKnown RBP20.34■□□□□ 0.85
CLN6-204ENST00000564752 PP2D1A8MPX8 630 aa20.34■□□□□ 0.85
CLN6-204ENST00000564752 NPR3P17342 541 aa20.34■□□□□ 0.85
CLN6-204ENST00000564752 ATP2C1P98194 919 aaPredicted RBP20.34■□□□□ 0.85
CLN6-204ENST00000564752 CUL4AQ13619 759 aa20.34■□□□□ 0.85
CLN6-204ENST00000564752 DCAF4L1Q3SXM0 396 aa20.34■□□□□ 0.85
CLN6-204ENST00000564752 FAM171A1Q5VUB5 890 aa20.34■□□□□ 0.85
CLN6-204ENST00000564752 LNX1Q8TBB1 728 aaPredicted RBP20.34■□□□□ 0.85
CLN6-204ENST00000564752 RSAD2Q8WXG1 361 aa20.34■□□□□ 0.85
CLN6-204ENST00000564752 PIK3R5Q8WYR1 880 aa20.34■□□□□ 0.85
CLN6-204ENST00000564752 PIDD1Q9HB75 910 aa20.34■□□□□ 0.85
CLN6-204ENST00000564752 GDAQ9Y2T3 454 aa20.34■□□□□ 0.85
CLN6-204ENST00000564752 ZMYND10O75800 440 aa20.33■□□□□ 0.85
CLN6-204ENST00000564752 ELAVL2Q12926 359 aaKnown RBP20.33■□□□□ 0.85
CLN6-204ENST00000564752 IL17AQ16552 155 aa20.33■□□□□ 0.85
CLN6-204ENST00000564752 ATF7IP2Q5U623 682 aa20.33■□□□□ 0.85
CLN6-204ENST00000564752 CEP57Q86XR8 500 aa20.33■□□□□ 0.85
CLN6-204ENST00000564752 FLCNQ8NFG4 579 aa20.33■□□□□ 0.85
CLN6-204ENST00000564752 NXPE3Q969Y0 559 aa20.33■□□□□ 0.85
CLN6-204ENST00000564752 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.33■□□□□ 0.852e-9■■■■■ 36.3
CLN6-204ENST00000564752 C2orf16Q68DN1 1984 aa20.32■□□□□ 0.84
CLN6-204ENST00000564752 VPS37CA5D8V6 355 aaPredicted RBP20.32■□□□□ 0.84
CLN6-204ENST00000564752 K7ERI5 159 aa20.32■□□□□ 0.84
CLN6-204ENST00000564752 NARSO43776 548 aaKnown RBP20.32■□□□□ 0.84
CLN6-204ENST00000564752 GFRA3O60609 400 aa20.32■□□□□ 0.84
CLN6-204ENST00000564752 PSMD5Q16401 504 aa20.32■□□□□ 0.84
CLN6-204ENST00000564752 CWF19L1Q69YN2 538 aaKnown RBP20.32■□□□□ 0.84
CLN6-204ENST00000564752 SLC44A3Q8N4M1 653 aa20.32■□□□□ 0.84
CLN6-204ENST00000564752 PPP1R10Q96QC0 940 aaKnown RBP20.32■□□□□ 0.84
CLN6-204ENST00000564752 FBXW11Q9UKB1 542 aa20.32■□□□□ 0.84
CLN6-204ENST00000564752 FBXL21Q9UKT6 434 aa20.32■□□□□ 0.84
CLN6-204ENST00000564752 DNM3Q9UQ16 869 aa20.32■□□□□ 0.84
CLN6-204ENST00000564752 TNFSF13BQ9Y275 285 aa20.32■□□□□ 0.84
CLN6-204ENST00000564752 PLXNA3P51805 1871 aa20.32■□□□□ 0.84
CLN6-204ENST00000564752 E9PMD0 336 aa20.31■□□□□ 0.84
CLN6-204ENST00000564752 PI15O43692 258 aa20.31■□□□□ 0.84
CLN6-204ENST00000564752 LAMP2P13473 410 aa20.31■□□□□ 0.84
CLN6-204ENST00000564752 AOC1P19801 751 aa20.31■□□□□ 0.84
CLN6-204ENST00000564752 PDCP20941 246 aa20.31■□□□□ 0.84
CLN6-204ENST00000564752 CDC25AP30304 524 aa20.31■□□□□ 0.84
CLN6-204ENST00000564752 PDXDC1Q6P996 788 aa20.31■□□□□ 0.84
CLN6-204ENST00000564752 BRAPQ7Z569 592 aa20.31■□□□□ 0.84
CLN6-204ENST00000564752 SIX5Q8N196 739 aa20.31■□□□□ 0.84
CLN6-204ENST00000564752 WNT16Q9UBV4 365 aa20.31■□□□□ 0.84
CLN6-204ENST00000564752 CFAP54Q96N23 3096 aa20.3■□□□□ 0.84
CLN6-204ENST00000564752 VWA3AA6NCI4 1184 aa20.3■□□□□ 0.84
CLN6-204ENST00000564752 CCDC169A6NNP5 214 aa20.3■□□□□ 0.84
CLN6-204ENST00000564752 PROB1E7EW31 1015 aa20.3■□□□□ 0.84
CLN6-204ENST00000564752 TMEM189-UBE2V1I3L0A0 370 aa20.3■□□□□ 0.84
CLN6-204ENST00000564752 IGFBP6P24592 240 aaPredicted RBP20.3■□□□□ 0.84
CLN6-204ENST00000564752 NPTX2P47972 431 aa20.3■□□□□ 0.84
CLN6-204ENST00000564752 ZRSR1Q15695 479 aaKnown RBP20.3■□□□□ 0.84
CLN6-204ENST00000564752 ARL6IP4Q66PJ3 421 aaKnown RBP20.3■□□□□ 0.84
CLN6-204ENST00000564752 DCLRE1AQ6PJP8 1040 aa20.3■□□□□ 0.84
CLN6-204ENST00000564752 CD300LGQ6UXG3 332 aa20.3■□□□□ 0.84
CLN6-204ENST00000564752 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.3■□□□□ 0.84
CLN6-204ENST00000564752 APBB1IPQ7Z5R6 666 aaPredicted RBP20.3■□□□□ 0.84
CLN6-204ENST00000564752 DAW1Q8N136 415 aa20.3■□□□□ 0.84
CLN6-204ENST00000564752 SNX27Q96L92 541 aa20.3■□□□□ 0.84
CLN6-204ENST00000564752 ACO2Q99798 780 aaKnown RBP20.3■□□□□ 0.84
CLN6-204ENST00000564752 TMEM134Q9H6X4 195 aa20.3■□□□□ 0.84
CLN6-204ENST00000564752 PTPRHQ9HD43 1115 aa20.3■□□□□ 0.84
CLN6-204ENST00000564752 ANHXE9PGG2 379 aa20.29■□□□□ 0.84
CLN6-204ENST00000564752 ADAM12O43184 909 aa20.29■□□□□ 0.84
CLN6-204ENST00000564752 HIP1RO75146 1068 aa20.29■□□□□ 0.84
CLN6-204ENST00000564752 B3GAT3O94766 335 aa20.29■□□□□ 0.84
CLN6-204ENST00000564752 HNRNPA1P09651 372 aaKnown RBP eCLIP20.29■□□□□ 0.84
CLN6-204ENST00000564752 FGFR3P22607 806 aa20.29■□□□□ 0.84
CLN6-204ENST00000564752 CLCNKBP51801 687 aa20.29■□□□□ 0.84
CLN6-204ENST00000564752 PEX3P56589 373 aa20.29■□□□□ 0.84
CLN6-204ENST00000564752 GLRA4Q5JXX5 417 aa20.29■□□□□ 0.84
CLN6-204ENST00000564752 RINT1Q6NUQ1 792 aa20.29■□□□□ 0.84
CLN6-204ENST00000564752 ALKAL1Q6UXT8 129 aa20.29■□□□□ 0.84
CLN6-204ENST00000564752 C1orf186Q6ZWK4 172 aa20.29■□□□□ 0.84
CLN6-204ENST00000564752 GET4Q7L5D6 327 aaPredicted RBP20.29■□□□□ 0.84
CLN6-204ENST00000564752 UROC1Q96N76 676 aa20.29■□□□□ 0.84
CLN6-204ENST00000564752 RTP3Q9BQQ7 232 aa20.29■□□□□ 0.84
CLN6-204ENST00000564752 MMTAG2Q9BU76 263 aaKnown RBP20.29■□□□□ 0.84
CLN6-204ENST00000564752 SMIM28A0A1B0GU29 152 aa20.28■□□□□ 0.84
CLN6-204ENST00000564752 BMP15O95972 392 aa20.28■□□□□ 0.84
CLN6-204ENST00000564752 CFHP08603 1231 aa20.28■□□□□ 0.84
CLN6-204ENST00000564752 SRFP11831 508 aa20.28■□□□□ 0.84
CLN6-204ENST00000564752 FSHRP23945 695 aa20.28■□□□□ 0.84
CLN6-204ENST00000564752 HOXA9P31269 272 aa20.28■□□□□ 0.84
CLN6-204ENST00000564752 GRM5P41594 1212 aa20.28■□□□□ 0.84
CLN6-204ENST00000564752 RAB33AQ14088 237 aa20.28■□□□□ 0.84
CLN6-204ENST00000564752 UPP1Q16831 310 aa20.28■□□□□ 0.84
CLN6-204ENST00000564752 XKR4Q5GH76 650 aa20.28■□□□□ 0.84
CLN6-204ENST00000564752 PPM1LQ5SGD2 360 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms