RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 CACNG4Q9UBN1 327 aa18.41■□□□□ 0.54
CCNF-203ENST00000564236 USP20Q9Y2K6 914 aa18.41■□□□□ 0.54
CCNF-203ENST00000564236 PLXNA3P51805 1871 aa18.4■□□□□ 0.54
CCNF-203ENST00000564236 K7ERI5 159 aa18.4■□□□□ 0.54
CCNF-203ENST00000564236 GALR2O43603 387 aaPredicted RBP18.4■□□□□ 0.54
CCNF-203ENST00000564236 ZMYND10O75800 440 aa18.4■□□□□ 0.54
CCNF-203ENST00000564236 PROZP22891 400 aa18.4■□□□□ 0.54
CCNF-203ENST00000564236 GUCY2CP25092 1073 aa18.4■□□□□ 0.54
CCNF-203ENST00000564236 HOXA9P31269 272 aa18.4■□□□□ 0.54
CCNF-203ENST00000564236 GRM5P41594 1212 aa18.4■□□□□ 0.54
CCNF-203ENST00000564236 ATP2C1P98194 919 aaPredicted RBP18.4■□□□□ 0.54
CCNF-203ENST00000564236 ASTLQ6HA08 431 aaPredicted RBP18.4■□□□□ 0.54
CCNF-203ENST00000564236 RINT1Q6NUQ1 792 aa18.4■□□□□ 0.54
CCNF-203ENST00000564236 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.4■□□□□ 0.54
CCNF-203ENST00000564236 DTHD1Q6ZMT9 781 aa18.4■□□□□ 0.54
CCNF-203ENST00000564236 RTL10Q7L3V2 364 aa18.4■□□□□ 0.54
CCNF-203ENST00000564236 TAS1R3Q7RTX0 852 aa18.4■□□□□ 0.54
CCNF-203ENST00000564236 PALB2Q86YC2 1186 aa18.4■□□□□ 0.54
CCNF-203ENST00000564236 RABGGTAQ92696 567 aa18.4■□□□□ 0.54
CCNF-203ENST00000564236 UROC1Q96N76 676 aa18.4■□□□□ 0.54
CCNF-203ENST00000564236 ACO2Q99798 780 aaKnown RBP18.4■□□□□ 0.54
CCNF-203ENST00000564236 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.4■□□□□ 0.54
CCNF-203ENST00000564236 RBM19Q9Y4C8 960 aaKnown RBP18.4■□□□□ 0.54
CCNF-203ENST00000564236 USP34Q70CQ2 3546 aa18.39■□□□□ 0.53
CCNF-203ENST00000564236 C2orf16Q68DN1 1984 aa18.39■□□□□ 0.53
CCNF-203ENST00000564236 PP2D1A8MPX8 630 aa18.39■□□□□ 0.53
CCNF-203ENST00000564236 E9PMD0 336 aa18.39■□□□□ 0.53
CCNF-203ENST00000564236 ABLIM1O14639 778 aa18.39■□□□□ 0.53
CCNF-203ENST00000564236 ST18O60284 1047 aa18.39■□□□□ 0.53
CCNF-203ENST00000564236 CENPBP07199 599 aaPredicted RBP18.39■□□□□ 0.53
CCNF-203ENST00000564236 HNRNPA1P09651 372 aaKnown RBP eCLIP18.39■□□□□ 0.53
CCNF-203ENST00000564236 RPL17P18621 184 aaKnown RBP18.39■□□□□ 0.53
CCNF-203ENST00000564236 FGFR3P22607 806 aa18.39■□□□□ 0.53
CCNF-203ENST00000564236 DMP1Q13316 513 aaPredicted RBP18.39■□□□□ 0.53
CCNF-203ENST00000564236 UPP1Q16831 310 aa18.39■□□□□ 0.53
CCNF-203ENST00000564236 TMEM132AQ24JP5 1023 aa18.39■□□□□ 0.53
CCNF-203ENST00000564236 FAM171A1Q5VUB5 890 aa18.39■□□□□ 0.53
CCNF-203ENST00000564236 PRSS55Q6UWB4 352 aaPredicted RBP18.39■□□□□ 0.53
CCNF-203ENST00000564236 CD300LGQ6UXG3 332 aa18.39■□□□□ 0.53
CCNF-203ENST00000564236 KCNK18Q7Z418 384 aa18.39■□□□□ 0.53
CCNF-203ENST00000564236 TMEM105Q8N8V8 129 aa18.39■□□□□ 0.53
CCNF-203ENST00000564236 CDT1Q9H211 546 aa18.39■□□□□ 0.53
CCNF-203ENST00000564236 CACNA1HO95180 2353 aa18.38■□□□□ 0.53
CCNF-203ENST00000564236 HIP1RO75146 1068 aa18.38■□□□□ 0.53
CCNF-203ENST00000564236 SPATA31D3P0C874 917 aa18.38■□□□□ 0.53
CCNF-203ENST00000564236 PEX3P56589 373 aa18.38■□□□□ 0.53
CCNF-203ENST00000564236 RAB33AQ14088 237 aa18.38■□□□□ 0.53
CCNF-203ENST00000564236 PSMD5Q16401 504 aa18.38■□□□□ 0.53
CCNF-203ENST00000564236 ARL6IP4Q66PJ3 421 aaKnown RBP18.38■□□□□ 0.53
CCNF-203ENST00000564236 CWF19L1Q69YN2 538 aaKnown RBP18.38■□□□□ 0.53
CCNF-203ENST00000564236 DCLRE1AQ6PJP8 1040 aa18.38■□□□□ 0.53
CCNF-203ENST00000564236 SPATA31D4Q6ZUB0 917 aa18.38■□□□□ 0.53
CCNF-203ENST00000564236 HASPINQ8TF76 798 aa18.38■□□□□ 0.53
CCNF-203ENST00000564236 SPIRE2Q8WWL2 714 aa18.38■□□□□ 0.53
CCNF-203ENST00000564236 TMX3Q96JJ7 454 aa18.38■□□□□ 0.53
CCNF-203ENST00000564236 MYADMQ96S97 322 aa18.38■□□□□ 0.53
CCNF-203ENST00000564236 PHOX2BQ99453 314 aa18.38■□□□□ 0.53
CCNF-203ENST00000564236 RUSC1Q9BVN2 902 aa18.38■□□□□ 0.53
CCNF-203ENST00000564236 MRPL4Q9BYD3 311 aaKnown RBP18.38■□□□□ 0.53
CCNF-203ENST00000564236 POLD4Q9HCU8 107 aa18.38■□□□□ 0.53
CCNF-203ENST00000564236 KCND2Q9NZV8 630 aa18.38■□□□□ 0.53
CCNF-203ENST00000564236 KCNG1Q9UIX4 513 aa18.38■□□□□ 0.53
CCNF-203ENST00000564236 GDAQ9Y2T3 454 aa18.38■□□□□ 0.53
CCNF-203ENST00000564236 ZFP37Q9Y6Q3 630 aaPredicted RBP18.38■□□□□ 0.53
CCNF-203ENST00000564236 MYO15AQ9UKN7 3530 aa18.38■□□□□ 0.53
CCNF-203ENST00000564236 SMIM28A0A1B0GU29 152 aa18.37■□□□□ 0.53
CCNF-203ENST00000564236 PROB1E7EW31 1015 aa18.37■□□□□ 0.53
CCNF-203ENST00000564236 ANHXE9PGG2 379 aa18.37■□□□□ 0.53
CCNF-203ENST00000564236 MCF2P10911 925 aa18.37■□□□□ 0.53
CCNF-203ENST00000564236 NPR3P17342 541 aa18.37■□□□□ 0.53
CCNF-203ENST00000564236 LIG1P18858 919 aa18.37■□□□□ 0.53
CCNF-203ENST00000564236 CDC25AP30304 524 aa18.37■□□□□ 0.53
CCNF-203ENST00000564236 TOPORSQ9NS56 1045 aaPredicted RBP18.37■□□□□ 0.53
CCNF-203ENST00000564236 MTRRQ9UBK8 725 aa18.37■□□□□ 0.53
CCNF-203ENST00000564236 WNT16Q9UBV4 365 aa18.37■□□□□ 0.53
CCNF-203ENST00000564236 BACE2Q9Y5Z0 518 aa18.37■□□□□ 0.53
CCNF-203ENST00000564236 CCDC169A6NNP5 214 aa18.36■□□□□ 0.53
CCNF-203ENST00000564236 SLC26A4O43511 780 aa18.36■□□□□ 0.53
CCNF-203ENST00000564236 B3GAT3O94766 335 aa18.36■□□□□ 0.53
CCNF-203ENST00000564236 LAMP2P13473 410 aa18.36■□□□□ 0.53
CCNF-203ENST00000564236 KCNE1P15382 129 aa18.36■□□□□ 0.53
CCNF-203ENST00000564236 AOC1P19801 751 aa18.36■□□□□ 0.53
CCNF-203ENST00000564236 MCM2P49736 904 aa18.36■□□□□ 0.53
CCNF-203ENST00000564236 CLCNKBP51801 687 aa18.36■□□□□ 0.53
CCNF-203ENST00000564236 UVSSAQ2YD98 709 aa18.36■□□□□ 0.53
CCNF-203ENST00000564236 CEP120Q8N960 986 aa18.36■□□□□ 0.53
CCNF-203ENST00000564236 SYT2Q8N9I0 419 aaPredicted RBP18.36■□□□□ 0.53
CCNF-203ENST00000564236 DDX27Q96GQ7 796 aaKnown RBP18.36■□□□□ 0.53
CCNF-203ENST00000564236 CCDC94Q9BW85 323 aaPredicted RBP18.36■□□□□ 0.53
CCNF-203ENST00000564236 KMT5AQ9NQR1 393 aa18.36■□□□□ 0.53
CCNF-203ENST00000564236 SLC38A7Q9NVC3 462 aa18.36■□□□□ 0.53
CCNF-203ENST00000564236 CNTN3Q9P232 1028 aa18.36■□□□□ 0.53
CCNF-203ENST00000564236 ADAM12O43184 909 aa18.35■□□□□ 0.53
CCNF-203ENST00000564236 TRAPPC3O43617 180 aa18.35■□□□□ 0.53
CCNF-203ENST00000564236 CD2BP2O95400 341 aaKnown RBP18.35■□□□□ 0.53
CCNF-203ENST00000564236 GBP2P32456 591 aaPredicted RBP18.35■□□□□ 0.53
CCNF-203ENST00000564236 YARSP54577 528 aaKnown RBP18.35■□□□□ 0.53
CCNF-203ENST00000564236 SLC12A3P55017 1021 aa18.35■□□□□ 0.53
CCNF-203ENST00000564236 ZNF568Q3ZCX4 644 aa18.35■□□□□ 0.53
CCNF-203ENST00000564236 GLRA4Q5JXX5 417 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms