RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 MTSS1LQ765P7 747 aa11.55□□□□□ -0.56
SF3B3-204ENST00000563739 FBXL16Q8N461 479 aa11.55□□□□□ -0.56
SF3B3-204ENST00000563739 CNNM3Q8NE01 707 aa11.55□□□□□ -0.56
SF3B3-204ENST00000563739 SLC7A14Q8TBB6 771 aa11.55□□□□□ -0.56
SF3B3-204ENST00000563739 CEP170P1Q96L14 293 aa11.55□□□□□ -0.56
SF3B3-204ENST00000563739 LXNQ9BS40 222 aa11.55□□□□□ -0.56
SF3B3-204ENST00000563739 PHF20Q9BVI0 1012 aa11.55□□□□□ -0.56
SF3B3-204ENST00000563739 SLC26A6Q9BXS9 759 aa11.55□□□□□ -0.56
SF3B3-204ENST00000563739 UBN1Q9NPG3 1134 aa11.55□□□□□ -0.56
SF3B3-204ENST00000563739 USP18Q9UMW8 372 aa11.55□□□□□ -0.56
SF3B3-204ENST00000563739 PCDHA4Q9UN74 947 aa11.55□□□□□ -0.56
SF3B3-204ENST00000563739 FAM205CA6NFA0 338 aa11.54□□□□□ -0.56
SF3B3-204ENST00000563739 CASTOR2A6NHX0 329 aa11.54□□□□□ -0.56
SF3B3-204ENST00000563739 MOSPD3O75425 235 aa11.54□□□□□ -0.56
SF3B3-204ENST00000563739 ECI2O75521 394 aa11.54□□□□□ -0.56
SF3B3-204ENST00000563739 NPTXRO95502 500 aa11.54□□□□□ -0.56
SF3B3-204ENST00000563739 GLRA2P23416 452 aa11.54□□□□□ -0.56
SF3B3-204ENST00000563739 PMLP29590 882 aa11.54□□□□□ -0.56
SF3B3-204ENST00000563739 AXLP30530 894 aa11.54□□□□□ -0.56
SF3B3-204ENST00000563739 ARL2P36404 184 aa11.54□□□□□ -0.56
SF3B3-204ENST00000563739 RFC5P40937 340 aa11.54□□□□□ -0.56
SF3B3-204ENST00000563739 CCR2P41597 374 aa11.54□□□□□ -0.56
SF3B3-204ENST00000563739 SRSF5Q13243 272 aaKnown RBP11.54□□□□□ -0.56
SF3B3-204ENST00000563739 INF2Q27J81 1249 aa11.54□□□□□ -0.56
SF3B3-204ENST00000563739 ZBTB41Q5SVQ8 909 aa11.54□□□□□ -0.56
SF3B3-204ENST00000563739 NOTUMQ6P988 496 aa11.54□□□□□ -0.56
SF3B3-204ENST00000563739 C4orf19Q8IY42 314 aa11.54□□□□□ -0.56
SF3B3-204ENST00000563739 GPR161Q8N6U8 529 aaKnown RBP11.54□□□□□ -0.56
SF3B3-204ENST00000563739 C3orf58Q8NDZ4 430 aa11.54□□□□□ -0.56
SF3B3-204ENST00000563739 CCDC148Q8NFR7 591 aa11.54□□□□□ -0.56
SF3B3-204ENST00000563739 BICD2Q8TD16 824 aa11.54□□□□□ -0.56
SF3B3-204ENST00000563739 SLC7A3Q8WY07 619 aa11.54□□□□□ -0.56
SF3B3-204ENST00000563739 TCEAL4Q96EI5 215 aa11.54□□□□□ -0.56
SF3B3-204ENST00000563739 BORCS6Q96GS4 357 aa11.54□□□□□ -0.56
SF3B3-204ENST00000563739 DYDC2Q96IM9 177 aa11.54□□□□□ -0.56
SF3B3-204ENST00000563739 JPH2Q9BR39 696 aaPredicted RBP11.54□□□□□ -0.56
SF3B3-204ENST00000563739 COLEC11Q9BWP8 271 aa11.54□□□□□ -0.56
SF3B3-204ENST00000563739 SH3GLB2Q9NR46 395 aa11.54□□□□□ -0.56
SF3B3-204ENST00000563739 SF3B1O75533 1304 aaKnown RBP eCLIP11.54□□□□□ -0.56
SF3B3-204ENST00000563739 KIAA1549LQ6ZVL6 1849 aa11.53□□□□□ -0.56
SF3B3-204ENST00000563739 NUP210Q8TEM1 1887 aaPredicted RBP11.53□□□□□ -0.56
SF3B3-204ENST00000563739 ARNTLO00327 626 aa11.53□□□□□ -0.56
SF3B3-204ENST00000563739 WNT7AO00755 349 aa11.53□□□□□ -0.56
SF3B3-204ENST00000563739 TM4SF5O14894 197 aa11.53□□□□□ -0.56
SF3B3-204ENST00000563739 DTNBO60941 627 aa11.53□□□□□ -0.56
SF3B3-204ENST00000563739 P4HBP07237 508 aaKnown RBP11.53□□□□□ -0.56
SF3B3-204ENST00000563739 FGFR3P22607 806 aa11.53□□□□□ -0.56
SF3B3-204ENST00000563739 PDIA3P30101 505 aaKnown RBP11.53□□□□□ -0.56
SF3B3-204ENST00000563739 YWHABP31946 246 aaKnown RBP11.53□□□□□ -0.56
SF3B3-204ENST00000563739 SATB1Q01826 763 aa11.53□□□□□ -0.56
SF3B3-204ENST00000563739 TUSC3Q13454 348 aa11.53□□□□□ -0.56
SF3B3-204ENST00000563739 RAB33AQ14088 237 aa11.53□□□□□ -0.56
SF3B3-204ENST00000563739 TOB2Q14106 344 aaPredicted RBP11.53□□□□□ -0.56
SF3B3-204ENST00000563739 PPM1LQ5SGD2 360 aa11.53□□□□□ -0.56
SF3B3-204ENST00000563739 AXDND1Q5T1B0 1012 aaPredicted RBP11.53□□□□□ -0.56
SF3B3-204ENST00000563739 ELMSAN1Q6PJG2 1045 aa11.53□□□□□ -0.56
SF3B3-204ENST00000563739 MAMSTRQ6ZN01 415 aa11.53□□□□□ -0.56
SF3B3-204ENST00000563739 MAP4K3Q8IVH8 894 aa11.53□□□□□ -0.56
SF3B3-204ENST00000563739 ATRIPQ8WXE1 791 aa11.53□□□□□ -0.56
SF3B3-204ENST00000563739 DDX27Q96GQ7 796 aaKnown RBP11.53□□□□□ -0.56
SF3B3-204ENST00000563739 TTPALQ9BTX7 342 aa11.53□□□□□ -0.56
SF3B3-204ENST00000563739 RXFP3Q9NSD7 469 aa11.53□□□□□ -0.56
SF3B3-204ENST00000563739 MTRRQ9UBK8 725 aa11.53□□□□□ -0.56
SF3B3-204ENST00000563739 DDX25Q9UHL0 483 aaKnown RBP11.53□□□□□ -0.56
SF3B3-204ENST00000563739 KCNH3Q9ULD8 1083 aa11.53□□□□□ -0.56
SF3B3-204ENST00000563739 USP20Q9Y2K6 914 aa11.53□□□□□ -0.56
SF3B3-204ENST00000563739 PPME1Q9Y570 386 aa11.53□□□□□ -0.56
SF3B3-204ENST00000563739 SNX14Q9Y5W7 946 aa11.53□□□□□ -0.56
SF3B3-204ENST00000563739 A0A1B0GUA9 196 aa11.52□□□□□ -0.57
SF3B3-204ENST00000563739 INO80B-WBP1J3KQ70 363 aa11.52□□□□□ -0.57
SF3B3-204ENST00000563739 K7ESF4 209 aa11.52□□□□□ -0.57
SF3B3-204ENST00000563739 HRO43593 1189 aa11.52□□□□□ -0.57
SF3B3-204ENST00000563739 ERLIN2O94905 339 aa11.52□□□□□ -0.57
SF3B3-204ENST00000563739 RHOP08100 348 aa11.52□□□□□ -0.57
SF3B3-204ENST00000563739 IRX6P78412 446 aaPredicted RBP11.52□□□□□ -0.57
SF3B3-204ENST00000563739 PFKPQ01813 784 aa11.52□□□□□ -0.57
SF3B3-204ENST00000563739 CYP4A11Q02928 519 aa11.52□□□□□ -0.57
SF3B3-204ENST00000563739 CREMQ03060 361 aa11.52□□□□□ -0.57
SF3B3-204ENST00000563739 POU5F1BQ06416 359 aa11.52□□□□□ -0.57
SF3B3-204ENST00000563739 ADCY1Q08828 1119 aa11.52□□□□□ -0.57
SF3B3-204ENST00000563739 CTTNQ14247 550 aaKnown RBP11.52□□□□□ -0.57
SF3B3-204ENST00000563739 GRM2Q14416 872 aa11.52□□□□□ -0.57
SF3B3-204ENST00000563739 EPHA7Q15375 998 aa11.52□□□□□ -0.57
SF3B3-204ENST00000563739 PABPC1LQ4VXU2 614 aaKnown RBP11.52□□□□□ -0.57
SF3B3-204ENST00000563739 FAM171A1Q5VUB5 890 aa11.52□□□□□ -0.57
SF3B3-204ENST00000563739 LAIR1Q6GTX8 287 aa11.52□□□□□ -0.57
SF3B3-204ENST00000563739 SLC27A1Q6PCB7 646 aa11.52□□□□□ -0.57
SF3B3-204ENST00000563739 PRR23CQ6ZRP0 262 aa11.52□□□□□ -0.57
SF3B3-204ENST00000563739 BLIDQ8IZY5 108 aa11.52□□□□□ -0.57
SF3B3-204ENST00000563739 NETO1Q8TDF5 533 aa11.52□□□□□ -0.57
SF3B3-204ENST00000563739 DNASE1L2Q92874 299 aa11.52□□□□□ -0.57
SF3B3-204ENST00000563739 RSPRY1Q96DX4 576 aa11.52□□□□□ -0.57
SF3B3-204ENST00000563739 MCRS1Q96EZ8 462 aa11.52□□□□□ -0.57
SF3B3-204ENST00000563739 MTRQ99707 1265 aa11.52□□□□□ -0.57
SF3B3-204ENST00000563739 NFKBIZQ9BYH8 718 aa11.52□□□□□ -0.57
SF3B3-204ENST00000563739 PDZD7Q9H5P4 517 aa11.52□□□□□ -0.57
SF3B3-204ENST00000563739 AVENQ9NQS1 362 aaPredicted RBP11.52□□□□□ -0.57
SF3B3-204ENST00000563739 SEMA4GQ9NTN9 838 aa11.52□□□□□ -0.57
SF3B3-204ENST00000563739 GJB4Q9NTQ9 266 aa11.52□□□□□ -0.57
SF3B3-204ENST00000563739 NAP1L2Q9ULW6 460 aaPredicted RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms