RNA–Protein interactions for RNA: ENST00000563667.5

PDXDC1-209, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 4

Gene PDXDC1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-209ENST00000563667 CD52P31358 61 aa16.77■□□□□ 0.28
PDXDC1-209ENST00000563667 GCLMP48507 274 aa16.77■□□□□ 0.28
PDXDC1-209ENST00000563667 KLK7P49862 253 aa16.77■□□□□ 0.28
PDXDC1-209ENST00000563667 CCL23P55773 120 aa16.77■□□□□ 0.28
PDXDC1-209ENST00000563667 LPIN1Q14693 890 aa16.77■□□□□ 0.28
PDXDC1-209ENST00000563667 SURF1Q15526 300 aa16.77■□□□□ 0.28
PDXDC1-209ENST00000563667 KYAT1Q16773 422 aa16.77■□□□□ 0.28
PDXDC1-209ENST00000563667 TWF2Q6IBS0 349 aaKnown RBP16.77■□□□□ 0.28
PDXDC1-209ENST00000563667 GBP6Q6ZN66 633 aa16.77■□□□□ 0.28
PDXDC1-209ENST00000563667 CCDC186Q7Z3E2 898 aa16.77■□□□□ 0.28
PDXDC1-209ENST00000563667 CPLX3Q8WVH0 158 aa16.77■□□□□ 0.28
PDXDC1-209ENST00000563667 CCDC51Q96ER9 411 aa16.77■□□□□ 0.28
PDXDC1-209ENST00000563667 ERGIC2Q96RQ1 377 aa16.77■□□□□ 0.28
PDXDC1-209ENST00000563667 CCDC94Q9BW85 323 aaPredicted RBP16.77■□□□□ 0.28
PDXDC1-209ENST00000563667 EIF2AQ9BY44 585 aaKnown RBP16.77■□□□□ 0.28
PDXDC1-209ENST00000563667 AGO3Q9H9G7 860 aaKnown RBP16.77■□□□□ 0.28
PDXDC1-209ENST00000563667 ERVK-5Q9HDB9 667 aa16.77■□□□□ 0.28
PDXDC1-209ENST00000563667 TOPORSQ9NS56 1045 aaPredicted RBP16.77■□□□□ 0.28
PDXDC1-209ENST00000563667 UMODL1Q5DID0 1318 aa16.76■□□□□ 0.27
PDXDC1-209ENST00000563667 ITIH6Q6UXX5 1313 aa16.76■□□□□ 0.27
PDXDC1-209ENST00000563667 RBAK-RBAKDNI3L0D1 243 aa16.76■□□□□ 0.27
PDXDC1-209ENST00000563667 FAM189A1O60320 539 aa16.76■□□□□ 0.27
PDXDC1-209ENST00000563667 TPM1P09493 284 aa16.76■□□□□ 0.27
PDXDC1-209ENST00000563667 ACRP10323 421 aa16.76■□□□□ 0.27
PDXDC1-209ENST00000563667 SELPP16109 830 aa16.76■□□□□ 0.27
PDXDC1-209ENST00000563667 ZSCAN20P17040 1043 aaPredicted RBP16.76■□□□□ 0.27
PDXDC1-209ENST00000563667 GRM5P41594 1212 aa16.76■□□□□ 0.27
PDXDC1-209ENST00000563667 ENPEPQ07075 957 aa16.76■□□□□ 0.27
PDXDC1-209ENST00000563667 PPP3CAQ08209 521 aa16.76■□□□□ 0.27
PDXDC1-209ENST00000563667 CETN1Q12798 172 aa16.76■□□□□ 0.27
PDXDC1-209ENST00000563667 C1orf220Q5T0J3 134 aa16.76■□□□□ 0.27
PDXDC1-209ENST00000563667 LRRC8DQ7L1W4 858 aa16.76■□□□□ 0.27
PDXDC1-209ENST00000563667 TMEM192Q8IY95 271 aa16.76■□□□□ 0.27
PDXDC1-209ENST00000563667 USP38Q8NB14 1042 aa16.76■□□□□ 0.27
PDXDC1-209ENST00000563667 ACAP3Q96P50 834 aa16.76■□□□□ 0.27
PDXDC1-209ENST00000563667 APOL6Q9BWW8 343 aa16.76■□□□□ 0.27
PDXDC1-209ENST00000563667 LSM14BQ9BX40 385 aaKnown RBP16.76■□□□□ 0.27
PDXDC1-209ENST00000563667 OSBPL7Q9BZF2 842 aa16.76■□□□□ 0.27
PDXDC1-209ENST00000563667 PADI3Q9ULW8 664 aa16.76■□□□□ 0.27
PDXDC1-209ENST00000563667 IL18RAPO95256 599 aa16.75■□□□□ 0.27
PDXDC1-209ENST00000563667 CXCL8P10145 99 aa16.75■□□□□ 0.27
PDXDC1-209ENST00000563667 GTF2H1P32780 548 aa16.75■□□□□ 0.27
PDXDC1-209ENST00000563667 MXI1P50539 228 aa16.75■□□□□ 0.27
PDXDC1-209ENST00000563667 WNT7BP56706 349 aa16.75■□□□□ 0.27
PDXDC1-209ENST00000563667 KCNMA1Q12791 1236 aa16.75■□□□□ 0.27
PDXDC1-209ENST00000563667 ENOX2Q16206 610 aaKnown RBP16.75■□□□□ 0.27
PDXDC1-209ENST00000563667 EXOC3L4Q17RC7 722 aa16.75■□□□□ 0.27
PDXDC1-209ENST00000563667 CBWD6Q4V339 395 aa16.75■□□□□ 0.27
PDXDC1-209ENST00000563667 CBWD3Q5JTY5 395 aa16.75■□□□□ 0.27
PDXDC1-209ENST00000563667 CBWD5Q5RIA9 395 aa16.75■□□□□ 0.27
PDXDC1-209ENST00000563667 LMBRD2Q68DH5 695 aaPredicted RBP16.75■□□□□ 0.27
PDXDC1-209ENST00000563667 NEK11Q8NG66 645 aa16.75■□□□□ 0.27
PDXDC1-209ENST00000563667 CGRRF1Q99675 332 aa16.75■□□□□ 0.27
PDXDC1-209ENST00000563667 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.75■□□□□ 0.271e-7■□□□□ 11.1
PDXDC1-209ENST00000563667 NUP58Q9BVL2 599 aa16.75■□□□□ 0.27
PDXDC1-209ENST00000563667 CHST12Q9NRB3 414 aa16.75■□□□□ 0.27
PDXDC1-209ENST00000563667 FAM207AQ9NSI2 230 aaPredicted RBP16.75■□□□□ 0.27
PDXDC1-209ENST00000563667 SIK3Q9Y2K2 1263 aa16.75■□□□□ 0.27
PDXDC1-209ENST00000563667 SQORQ9Y6N5 450 aa16.75■□□□□ 0.27
PDXDC1-209ENST00000563667 LACTBL1A8MY62 500 aa16.74■□□□□ 0.27
PDXDC1-209ENST00000563667 TRIM21P19474 475 aaKnown RBP16.74■□□□□ 0.27
PDXDC1-209ENST00000563667 YARSP54577 528 aaKnown RBP16.74■□□□□ 0.27
PDXDC1-209ENST00000563667 GSDMDP57764 484 aa16.74■□□□□ 0.27
PDXDC1-209ENST00000563667 RBL2Q08999 1139 aa16.74■□□□□ 0.27
PDXDC1-209ENST00000563667 TBX2Q13207 712 aaPredicted RBP16.74■□□□□ 0.27
PDXDC1-209ENST00000563667 TRIM14Q14142 442 aa16.74■□□□□ 0.27
PDXDC1-209ENST00000563667 UBXN11Q5T124 520 aa16.74■□□□□ 0.27
PDXDC1-209ENST00000563667 KRT39Q6A163 491 aa16.74■□□□□ 0.27
PDXDC1-209ENST00000563667 PSRC1Q6PGN9 363 aaPredicted RBP16.74■□□□□ 0.27
PDXDC1-209ENST00000563667 TRAF7Q6Q0C0 670 aa16.74■□□□□ 0.27
PDXDC1-209ENST00000563667 TRIM44Q96DX7 344 aaPredicted RBP16.74■□□□□ 0.27
PDXDC1-209ENST00000563667 SCLYQ96I15 445 aa16.74■□□□□ 0.27
PDXDC1-209ENST00000563667 TMEM117Q9H0C3 514 aa16.74■□□□□ 0.27
PDXDC1-209ENST00000563667 TMEM8AQ9HCN3 771 aa16.74■□□□□ 0.27
PDXDC1-209ENST00000563667 IL23AQ9NPF7 189 aa16.74■□□□□ 0.27
PDXDC1-209ENST00000563667 SNTG2Q9NY99 539 aa16.74■□□□□ 0.27
PDXDC1-209ENST00000563667 GCNT4Q9P109 453 aa16.74■□□□□ 0.27
PDXDC1-209ENST00000563667 PARP2Q9UGN5 583 aa16.74■□□□□ 0.27
PDXDC1-209ENST00000563667 GTPBP10A4D1E9 387 aaKnown RBP16.73■□□□□ 0.27
PDXDC1-209ENST00000563667 AKR1B15C9JRZ8 316 aaPredicted RBP16.73■□□□□ 0.27
PDXDC1-209ENST00000563667 P4HA2O15460 535 aa16.73■□□□□ 0.27
PDXDC1-209ENST00000563667 PHACTR2O75167 634 aa16.73■□□□□ 0.27
PDXDC1-209ENST00000563667 SLC9A1P19634 815 aa16.73■□□□□ 0.27
PDXDC1-209ENST00000563667 IBSPP21815 317 aaPredicted RBP16.73■□□□□ 0.27
PDXDC1-209ENST00000563667 MCCD1P59942 119 aaPredicted RBP16.73■□□□□ 0.27
PDXDC1-209ENST00000563667 GOLGA8FQ08AF8 430 aa16.73■□□□□ 0.27
PDXDC1-209ENST00000563667 GOLGA8DPQ0D2H9 430 aa16.73■□□□□ 0.27
PDXDC1-209ENST00000563667 BIRC3Q13489 604 aa16.73■□□□□ 0.27
PDXDC1-209ENST00000563667 GPR153Q6NV75 609 aa16.73■□□□□ 0.27
PDXDC1-209ENST00000563667 ZNF365Q70YC5 407 aa16.73■□□□□ 0.27
PDXDC1-209ENST00000563667 Q7L0L9 218 aa16.73■□□□□ 0.27
PDXDC1-209ENST00000563667 DEFB123Q8N688 67 aa16.73■□□□□ 0.27
PDXDC1-209ENST00000563667 ZNF516Q92618 1163 aa16.73■□□□□ 0.27
PDXDC1-209ENST00000563667 FAM84AQ96KN4 292 aa16.73■□□□□ 0.27
PDXDC1-209ENST00000563667 INTS2Q9H0H0 1204 aaKnown RBP16.73■□□□□ 0.27
PDXDC1-209ENST00000563667 WNT8AQ9H1J5 351 aa16.73■□□□□ 0.27
PDXDC1-209ENST00000563667 NXF3Q9H4D5 531 aaKnown RBP16.73■□□□□ 0.27
PDXDC1-209ENST00000563667 HES2Q9Y543 173 aa16.73■□□□□ 0.27
PDXDC1-209ENST00000563667 SZT2Q5T011 3432 aa16.73■□□□□ 0.27
PDXDC1-209ENST00000563667 TRIOBPQ9H2D6 2365 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms