RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 NPATQ14207 1427 aa6.48□□□□□ -1.37
LINC00254-201ENST00000563416 PTPRKQ15262 1439 aa6.48□□□□□ -1.37
LINC00254-201ENST00000563416 KDM5AP29375 1690 aaKnown RBP6.48□□□□□ -1.37
LINC00254-201ENST00000563416 SPATA31D1Q6ZQQ2 1576 aa6.48□□□□□ -1.37
LINC00254-201ENST00000563416 PZPP20742 1482 aa6.47□□□□□ -1.37
LINC00254-201ENST00000563416 ROCK1Q13464 1354 aa6.47□□□□□ -1.37
LINC00254-201ENST00000563416 ANKRD30AQ9BXX3 1397 aa6.47□□□□□ -1.37
LINC00254-201ENST00000563416 LMTK2Q8IWU2 1503 aa6.47□□□□□ -1.37
LINC00254-201ENST00000563416 E9PCH4 1651 aa6.47□□□□□ -1.37
LINC00254-201ENST00000563416 KRTAP23-1A1A580 65 aa6.47□□□□□ -1.37
LINC00254-201ENST00000563416 TRIM75PA6NK02 468 aa6.47□□□□□ -1.37
LINC00254-201ENST00000563416 GOLGA6L6A8MZA4 724 aa6.47□□□□□ -1.37
LINC00254-201ENST00000563416 HOXA3O43365 443 aaPredicted RBP6.47□□□□□ -1.37
LINC00254-201ENST00000563416 AKR1B10O60218 316 aa6.47□□□□□ -1.37
LINC00254-201ENST00000563416 CRHR1P34998 444 aa6.47□□□□□ -1.37
LINC00254-201ENST00000563416 MAN2A2P49641 1150 aa6.47□□□□□ -1.37
LINC00254-201ENST00000563416 CDKN1CP49918 316 aaPredicted RBP6.47□□□□□ -1.37
LINC00254-201ENST00000563416 ITKQ08881 620 aa6.47□□□□□ -1.37
LINC00254-201ENST00000563416 MRPL49Q13405 166 aaKnown RBP6.47□□□□□ -1.37
LINC00254-201ENST00000563416 CNGB1Q14028 1251 aaPredicted RBP6.47□□□□□ -1.37
LINC00254-201ENST00000563416 CLUL1Q15846 466 aa6.47□□□□□ -1.37
LINC00254-201ENST00000563416 PTPROQ16827 1216 aa6.47□□□□□ -1.37
LINC00254-201ENST00000563416 SPTY2D1Q68D10 685 aaPredicted RBP6.47□□□□□ -1.37
LINC00254-201ENST00000563416 SPRED1Q7Z699 444 aa6.47□□□□□ -1.37
LINC00254-201ENST00000563416 FAM83AQ86UY5 434 aa6.47□□□□□ -1.37
LINC00254-201ENST00000563416 C1orf210Q8IVY1 113 aa6.47□□□□□ -1.37
LINC00254-201ENST00000563416 ELOA2Q8IYF1 753 aaPredicted RBP6.47□□□□□ -1.37
LINC00254-201ENST00000563416 GPR156Q8NFN8 814 aa6.47□□□□□ -1.37
LINC00254-201ENST00000563416 ATXN2LQ8WWM7 1075 aaKnown RBP6.47□□□□□ -1.37
LINC00254-201ENST00000563416 RIN2Q8WYP3 895 aaPredicted RBP6.47□□□□□ -1.37
LINC00254-201ENST00000563416 PDCD2LQ9BRP1 358 aa6.47□□□□□ -1.37
LINC00254-201ENST00000563416 ADI1Q9BV57 179 aa6.47□□□□□ -1.37
LINC00254-201ENST00000563416 BRINP2Q9C0B6 783 aa6.47□□□□□ -1.37
LINC00254-201ENST00000563416 GPRC5DQ9NZD1 345 aa6.47□□□□□ -1.37
LINC00254-201ENST00000563416 GPR45Q9Y5Y3 372 aa6.47□□□□□ -1.37
LINC00254-201ENST00000563416 CEP170BQ9Y4F5 1589 aaPredicted RBP6.47□□□□□ -1.37
LINC00254-201ENST00000563416 UBR1Q8IWV7 1749 aa6.47□□□□□ -1.37
LINC00254-201ENST00000563416 EFCAB6Q5THR3 1501 aa6.46□□□□□ -1.37
LINC00254-201ENST00000563416 ITGA10O75578 1167 aa6.46□□□□□ -1.38
LINC00254-201ENST00000563416 OSMP13725 252 aa6.46□□□□□ -1.38
LINC00254-201ENST00000563416 MTNR1BP49286 362 aa6.46□□□□□ -1.38
LINC00254-201ENST00000563416 APBA1Q02410 837 aa6.46□□□□□ -1.38
LINC00254-201ENST00000563416 MALLQ13021 153 aa6.46□□□□□ -1.38
LINC00254-201ENST00000563416 DCAF17Q5H9S7 520 aaPredicted RBP6.46□□□□□ -1.38
LINC00254-201ENST00000563416 SYDE2Q5VT97 1194 aa6.46□□□□□ -1.38
LINC00254-201ENST00000563416 PGM2L1Q6PCE3 622 aa6.46□□□□□ -1.38
LINC00254-201ENST00000563416 RNF207Q6ZRF8 634 aa6.46□□□□□ -1.38
LINC00254-201ENST00000563416 MB21D1Q8N884 522 aa6.46□□□□□ -1.38
LINC00254-201ENST00000563416 MDGA1Q8NFP4 955 aa6.46□□□□□ -1.38
LINC00254-201ENST00000563416 MTMR8Q96EF0 704 aa6.46□□□□□ -1.38
LINC00254-201ENST00000563416 CPPED1Q9BRF8 314 aaPredicted RBP6.46□□□□□ -1.38
LINC00254-201ENST00000563416 RBM12Q9NTZ6 932 aaKnown RBP6.46□□□□□ -1.38
LINC00254-201ENST00000563416 MKS1Q9NXB0 559 aa6.46□□□□□ -1.38
LINC00254-201ENST00000563416 CLCA2Q9UQC9 943 aa6.46□□□□□ -1.38
LINC00254-201ENST00000563416 SPHKAPQ2M3C7 1700 aa6.45□□□□□ -1.38
LINC00254-201ENST00000563416 MATN3O15232 486 aa6.45□□□□□ -1.38
LINC00254-201ENST00000563416 STC2O76061 302 aa6.45□□□□□ -1.38
LINC00254-201ENST00000563416 ECHS1P30084 290 aa6.45□□□□□ -1.38
LINC00254-201ENST00000563416 MTMR1Q13613 665 aa6.45□□□□□ -1.38
LINC00254-201ENST00000563416 FAM50AQ14320 339 aaKnown RBP6.45□□□□□ -1.38
LINC00254-201ENST00000563416 RRP1BQ14684 758 aaKnown RBP6.45□□□□□ -1.38
LINC00254-201ENST00000563416 MST1LQ2TV78 715 aa6.45□□□□□ -1.38
LINC00254-201ENST00000563416 METTL24Q5JXM2 366 aa6.45□□□□□ -1.38
LINC00254-201ENST00000563416 DOK3Q7L591 496 aa6.45□□□□□ -1.38
LINC00254-201ENST00000563416 GGNQ86UU5 652 aa6.45□□□□□ -1.38
LINC00254-201ENST00000563416 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.45□□□□□ -1.38
LINC00254-201ENST00000563416 EXTL1Q92935 676 aa6.45□□□□□ -1.38
LINC00254-201ENST00000563416 GPR87Q9BY21 358 aa6.45□□□□□ -1.38
LINC00254-201ENST00000563416 TRIM8Q9BZR9 551 aa6.45□□□□□ -1.38
LINC00254-201ENST00000563416 SCOCQ9UIL1 159 aa6.45□□□□□ -1.38
LINC00254-201ENST00000563416 TRHDEQ9UKU6 1024 aa6.45□□□□□ -1.38
LINC00254-201ENST00000563416 MRFAP1Q9Y605 127 aa6.45□□□□□ -1.38
LINC00254-201ENST00000563416 ZMYM3Q14202 1370 aa6.44□□□□□ -1.38
LINC00254-201ENST00000563416 PIK3C2BO00750 1634 aa6.44□□□□□ -1.38
LINC00254-201ENST00000563416 KIF3BO15066 747 aa6.44□□□□□ -1.38
LINC00254-201ENST00000563416 TNFRSF1AP19438 455 aa6.44□□□□□ -1.38
LINC00254-201ENST00000563416 AGXTP21549 392 aa6.44□□□□□ -1.38
LINC00254-201ENST00000563416 ADSLP30566 484 aaPredicted RBP6.44□□□□□ -1.38
LINC00254-201ENST00000563416 PER3P56645 1201 aa6.44□□□□□ -1.38
LINC00254-201ENST00000563416 FAM214AQ32MH5 1076 aa6.44□□□□□ -1.38
LINC00254-201ENST00000563416 TMPRSS6Q8IU80 811 aa6.44□□□□□ -1.38
LINC00254-201ENST00000563416 C1orf162Q8NEQ5 155 aaPredicted RBP6.44□□□□□ -1.38
LINC00254-201ENST00000563416 UHRF1Q96T88 793 aaPredicted RBP6.44□□□□□ -1.38
LINC00254-201ENST00000563416 KRTAP9-3Q9BYQ3 159 aa6.44□□□□□ -1.38
LINC00254-201ENST00000563416 VPS11Q9H270 941 aa6.44□□□□□ -1.38
LINC00254-201ENST00000563416 BCO1Q9HAY6 547 aa6.44□□□□□ -1.38
LINC00254-201ENST00000563416 PARPBPQ9NWS1 579 aa6.44□□□□□ -1.38
LINC00254-201ENST00000563416 SYNMO15061 1565 aa6.44□□□□□ -1.38
LINC00254-201ENST00000563416 ARHGAP31Q2M1Z3 1444 aa6.43□□□□□ -1.38
LINC00254-201ENST00000563416 UHRF1BP1Q6BDS2 1440 aa6.43□□□□□ -1.38
LINC00254-201ENST00000563416 ANKRD50Q9ULJ7 1429 aa6.43□□□□□ -1.38
LINC00254-201ENST00000563416 ERVK-7P63135 1459 aa6.43□□□□□ -1.38
LINC00254-201ENST00000563416 SHTN1A0MZ66 631 aa6.43□□□□□ -1.38
LINC00254-201ENST00000563416 PRR5-ARHGAP8B1AHC4 643 aa6.43□□□□□ -1.38
LINC00254-201ENST00000563416 B5MCH6 92 aa6.43□□□□□ -1.38
LINC00254-201ENST00000563416 KATNA1O75449 491 aa6.43□□□□□ -1.38
LINC00254-201ENST00000563416 ENDOD1O94919 500 aa6.43□□□□□ -1.38
LINC00254-201ENST00000563416 MYBL2P10244 700 aa6.43□□□□□ -1.38
LINC00254-201ENST00000563416 IARSP41252 1262 aaKnown RBP6.43□□□□□ -1.38
LINC00254-201ENST00000563416 MCAMP43121 646 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms