RNA–Protein interactions for RNA: ENST00000562404.1

LPCAT4-202, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 3

Gene LPCAT4, Length 577 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-202ENST00000562404 BRD1O95696 1058 aa12.16□□□□□ -0.46
LPCAT4-202ENST00000562404 URODP06132 367 aa12.16□□□□□ -0.46
LPCAT4-202ENST00000562404 HOXB8P17481 243 aaPredicted RBP12.16□□□□□ -0.46
LPCAT4-202ENST00000562404 RPL17P18621 184 aaKnown RBP12.16□□□□□ -0.46
LPCAT4-202ENST00000562404 KLRC2P26717 231 aa12.16□□□□□ -0.46
LPCAT4-202ENST00000562404 DDIT3P35638 169 aa12.16□□□□□ -0.46
LPCAT4-202ENST00000562404 NASPP49321 788 aaPredicted RBP12.16□□□□□ -0.46
LPCAT4-202ENST00000562404 GLUD2P49448 558 aa12.16□□□□□ -0.46
LPCAT4-202ENST00000562404 CBX2Q14781 532 aaPredicted RBP12.16□□□□□ -0.46
LPCAT4-202ENST00000562404 XKR4Q5GH76 650 aa12.16□□□□□ -0.46
LPCAT4-202ENST00000562404 SLC39A4Q6P5W5 647 aa12.16□□□□□ -0.46
LPCAT4-202ENST00000562404 PRSS55Q6UWB4 352 aaPredicted RBP12.16□□□□□ -0.46
LPCAT4-202ENST00000562404 MPZL3Q6UWV2 235 aa12.16□□□□□ -0.46
LPCAT4-202ENST00000562404 HAUS6Q7Z4H7 955 aa12.16□□□□□ -0.46
LPCAT4-202ENST00000562404 RNF135Q8IUD6 432 aa12.16□□□□□ -0.46
LPCAT4-202ENST00000562404 GLYCTKQ8IVS8 523 aa12.16□□□□□ -0.46
LPCAT4-202ENST00000562404 LINC00301Q8NCQ3 95 aa12.16□□□□□ -0.46
LPCAT4-202ENST00000562404 C3orf58Q8NDZ4 430 aa12.16□□□□□ -0.46
LPCAT4-202ENST00000562404 RPGRIP1Q96KN7 1286 aa12.16□□□□□ -0.46
LPCAT4-202ENST00000562404 SNX27Q96L92 541 aa12.16□□□□□ -0.46
LPCAT4-202ENST00000562404 LRFN3Q9BTN0 628 aa12.16□□□□□ -0.46
LPCAT4-202ENST00000562404 PANK2Q9BZ23 570 aa12.16□□□□□ -0.46
LPCAT4-202ENST00000562404 ZSCAN16Q9H4T2 348 aaPredicted RBP12.16□□□□□ -0.46
LPCAT4-202ENST00000562404 RXFP1Q9HBX9 757 aa12.16□□□□□ -0.46
LPCAT4-202ENST00000562404 MRPL17Q9NRX2 175 aaKnown RBP12.16□□□□□ -0.46
LPCAT4-202ENST00000562404 MUTYHQ9UIF7 546 aa12.16□□□□□ -0.46
LPCAT4-202ENST00000562404 ODF2LQ9ULJ1 636 aa12.16□□□□□ -0.46
LPCAT4-202ENST00000562404 MYMKA6NI61 221 aa12.15□□□□□ -0.46
LPCAT4-202ENST00000562404 TADA2AO75478 443 aa12.15□□□□□ -0.46
LPCAT4-202ENST00000562404 SPATA31D3P0C874 917 aa12.15□□□□□ -0.46
LPCAT4-202ENST00000562404 MCF2P10911 925 aa12.15□□□□□ -0.46
LPCAT4-202ENST00000562404 NMT1P30419 496 aaKnown RBP12.15□□□□□ -0.46
LPCAT4-202ENST00000562404 TNFSF9P41273 254 aa12.15□□□□□ -0.46
LPCAT4-202ENST00000562404 CLCNKBP51801 687 aa12.15□□□□□ -0.46
LPCAT4-202ENST00000562404 SMTNP53814 917 aa12.15□□□□□ -0.46
LPCAT4-202ENST00000562404 BMS1Q14692 1282 aaKnown RBP12.15□□□□□ -0.46
LPCAT4-202ENST00000562404 SLC10A6Q3KNW5 377 aa12.15□□□□□ -0.46
LPCAT4-202ENST00000562404 FOXD4L6Q3SYB3 417 aaPredicted RBP12.15□□□□□ -0.46
LPCAT4-202ENST00000562404 ZC2HC1CQ53FD0 456 aaPredicted RBP12.15□□□□□ -0.46
LPCAT4-202ENST00000562404 ZBTB41Q5SVQ8 909 aa12.15□□□□□ -0.46
LPCAT4-202ENST00000562404 TMC5Q6UXY8 1006 aa12.15□□□□□ -0.46
LPCAT4-202ENST00000562404 FOXD4L3Q6VB84 417 aaPredicted RBP12.15□□□□□ -0.46
LPCAT4-202ENST00000562404 SPATA31D4Q6ZUB0 917 aa12.15□□□□□ -0.46
LPCAT4-202ENST00000562404 DYMQ7RTS9 669 aa12.15□□□□□ -0.46
LPCAT4-202ENST00000562404 HSCBQ8IWL3 235 aa12.15□□□□□ -0.46
LPCAT4-202ENST00000562404 MYCT1Q8N699 235 aa12.15□□□□□ -0.46
LPCAT4-202ENST00000562404 RASSF8Q8NHQ8 419 aa12.15□□□□□ -0.46
LPCAT4-202ENST00000562404 RIN2Q8WYP3 895 aaPredicted RBP12.15□□□□□ -0.46
LPCAT4-202ENST00000562404 KCNN1Q92952 543 aa12.15□□□□□ -0.46
LPCAT4-202ENST00000562404 C18orf25Q96B23 403 aaPredicted RBP12.15□□□□□ -0.46
LPCAT4-202ENST00000562404 FBXL18Q96ME1 805 aa12.15□□□□□ -0.46
LPCAT4-202ENST00000562404 ADAM7Q9H2U9 754 aa12.15□□□□□ -0.46
LPCAT4-202ENST00000562404 LARSQ9P2J5 1176 aaKnown RBP12.15□□□□□ -0.46
LPCAT4-202ENST00000562404 ANKFY1Q9P2R3 1169 aa12.15□□□□□ -0.46
LPCAT4-202ENST00000562404 MORC2Q9Y6X9 1032 aaPredicted RBP12.15□□□□□ -0.46
LPCAT4-202ENST00000562404 NOTCH4Q99466 2003 aa12.15□□□□□ -0.47
LPCAT4-202ENST00000562404 TISP43B9A030 160 aa12.14□□□□□ -0.47
LPCAT4-202ENST00000562404 I3L4J1 428 aa12.14□□□□□ -0.47
LPCAT4-202ENST00000562404 K7ENM7 598 aa12.14□□□□□ -0.47
LPCAT4-202ENST00000562404 ADAM12O43184 909 aa12.14□□□□□ -0.47
LPCAT4-202ENST00000562404 DCXO43602 365 aa12.14□□□□□ -0.47
LPCAT4-202ENST00000562404 TRAK2O60296 914 aa12.14□□□□□ -0.47
LPCAT4-202ENST00000562404 FAM189A1O60320 539 aa12.14□□□□□ -0.47
LPCAT4-202ENST00000562404 NR1I2O75469 434 aa12.14□□□□□ -0.47
LPCAT4-202ENST00000562404 TOM1L1O75674 476 aa12.14□□□□□ -0.47
LPCAT4-202ENST00000562404 FAM13AO94988 1023 aa12.14□□□□□ -0.47
LPCAT4-202ENST00000562404 SRGAP2BP0DMP2 458 aa12.14□□□□□ -0.47
LPCAT4-202ENST00000562404 BRCC3P46736 316 aa12.14□□□□□ -0.47
LPCAT4-202ENST00000562404 SPAG1Q07617 926 aa12.14□□□□□ -0.47
LPCAT4-202ENST00000562404 MCL1Q07820 350 aa12.14□□□□□ -0.47
LPCAT4-202ENST00000562404 STRN3Q13033 797 aa12.14□□□□□ -0.47
LPCAT4-202ENST00000562404 NOLC1Q14978 699 aaKnown RBP eCLIP12.14□□□□□ -0.47
LPCAT4-202ENST00000562404 UPP1Q16831 310 aa12.14□□□□□ -0.47
LPCAT4-202ENST00000562404 USP41Q3LFD5 358 aa12.14□□□□□ -0.47
LPCAT4-202ENST00000562404 TPRNQ4KMQ1 711 aa12.14□□□□□ -0.47
LPCAT4-202ENST00000562404 FAM171A1Q5VUB5 890 aa12.14□□□□□ -0.47
LPCAT4-202ENST00000562404 ZPBP2Q6X784 338 aa12.14□□□□□ -0.47
LPCAT4-202ENST00000562404 PALB2Q86YC2 1186 aa12.14□□□□□ -0.47
LPCAT4-202ENST00000562404 LNX1Q8TBB1 728 aaPredicted RBP12.14□□□□□ -0.47
LPCAT4-202ENST00000562404 DNAJC19Q96DA6 116 aa12.14□□□□□ -0.47
LPCAT4-202ENST00000562404 CHAMP1Q96JM3 812 aa12.14□□□□□ -0.47
LPCAT4-202ENST00000562404 POP1Q99575 1024 aaKnown RBP12.14□□□□□ -0.47
LPCAT4-202ENST00000562404 CLSTN3Q9BQT9 956 aa12.14□□□□□ -0.47
LPCAT4-202ENST00000562404 TCHPQ9BT92 498 aa12.14□□□□□ -0.47
LPCAT4-202ENST00000562404 CCDC94Q9BW85 323 aaPredicted RBP12.14□□□□□ -0.47
LPCAT4-202ENST00000562404 EMILIN2Q9BXX0 1053 aa12.14□□□□□ -0.47
LPCAT4-202ENST00000562404 ZHX3Q9H4I2 956 aa12.14□□□□□ -0.47
LPCAT4-202ENST00000562404 PARVGQ9HBI0 331 aa12.14□□□□□ -0.47
LPCAT4-202ENST00000562404 MAN1C1Q9NR34 630 aa12.14□□□□□ -0.47
LPCAT4-202ENST00000562404 TBX20Q9UMR3 447 aa12.14□□□□□ -0.47
LPCAT4-202ENST00000562404 SF3B1O75533 1304 aaKnown RBP eCLIP12.13□□□□□ -0.47
LPCAT4-202ENST00000562404 SCN1AP35498 2009 aa12.13□□□□□ -0.47
LPCAT4-202ENST00000562404 C2CD4DB7Z1M9 353 aa12.13□□□□□ -0.47
LPCAT4-202ENST00000562404 ANKRD63C9JTQ0 380 aa12.13□□□□□ -0.47
LPCAT4-202ENST00000562404 TMEM189-UBE2V1I3L0A0 370 aa12.13□□□□□ -0.47
LPCAT4-202ENST00000562404 TGM5O43548 720 aa12.13□□□□□ -0.47
LPCAT4-202ENST00000562404 GPR37L1O60883 481 aa12.13□□□□□ -0.47
LPCAT4-202ENST00000562404 RFPL2O75678 378 aa12.13□□□□□ -0.47
LPCAT4-202ENST00000562404 PIGRP01833 764 aa12.13□□□□□ -0.47
LPCAT4-202ENST00000562404 KRT18P05783 430 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms