RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 MYH11P35749 1972 aa14.92□□□□□ -0.02
VPS9D1-202ENST00000561976 MAPK4P31152 587 aa14.92□□□□□ -0.02
VPS9D1-202ENST00000561976 C1orf220Q5T0J3 134 aa14.92□□□□□ -0.02
VPS9D1-202ENST00000561976 RHBDF2Q6PJF5 856 aa14.92□□□□□ -0.02
VPS9D1-202ENST00000561976 ERICH1Q86X53 443 aa14.92□□□□□ -0.02
VPS9D1-202ENST00000561976 CYP4X1Q8N118 509 aa14.92□□□□□ -0.02
VPS9D1-202ENST00000561976 MAB21L3Q8N8X9 362 aa14.92□□□□□ -0.02
VPS9D1-202ENST00000561976 PSPC1Q8WXF1 523 aaKnown RBP14.92□□□□□ -0.02
VPS9D1-202ENST00000561976 STRA6Q9BX79 667 aa14.92□□□□□ -0.02
VPS9D1-202ENST00000561976 ANAPC7Q9UJX3 599 aa14.92□□□□□ -0.02
VPS9D1-202ENST00000561976 BTAF1O14981 1849 aa14.92□□□□□ -0.02
VPS9D1-202ENST00000561976 ADAMTSL1Q8N6G6 1762 aa14.91□□□□□ -0.02
VPS9D1-202ENST00000561976 GSTTP1A0A1W2PQM5 241 aa14.91□□□□□ -0.02
VPS9D1-202ENST00000561976 SKAP2O75563 359 aaPredicted RBP14.91□□□□□ -0.02
VPS9D1-202ENST00000561976 CYP11B1P15538 503 aa14.91□□□□□ -0.02
VPS9D1-202ENST00000561976 MUTP22033 750 aa14.91□□□□□ -0.02
VPS9D1-202ENST00000561976 MKRN3Q13064 507 aaKnown RBP14.91□□□□□ -0.02
VPS9D1-202ENST00000561976 FAM47EQ6ZV65 393 aa14.91□□□□□ -0.02
VPS9D1-202ENST00000561976 SH3BP5LQ7L8J4 393 aa14.91□□□□□ -0.02
VPS9D1-202ENST00000561976 TRMT1LQ7Z2T5 733 aaKnown RBP14.91□□□□□ -0.02
VPS9D1-202ENST00000561976 PLEKHO2Q8TD55 490 aa14.91□□□□□ -0.02
VPS9D1-202ENST00000561976 CCDC127Q96BQ5 260 aa14.91□□□□□ -0.02
VPS9D1-202ENST00000561976 BATF3Q9NR55 127 aa14.91□□□□□ -0.02
VPS9D1-202ENST00000561976 NINJ2Q9NZG7 142 aa14.91□□□□□ -0.02
VPS9D1-202ENST00000561976 FAM198AQ9UFP1 575 aa14.91□□□□□ -0.02
VPS9D1-202ENST00000561976 PDE6BP35913 854 aa14.91□□□□□ -0.02
VPS9D1-202ENST00000561976 STAT2P52630 851 aa14.91□□□□□ -0.02
VPS9D1-202ENST00000561976 STRN3Q13033 797 aa14.91□□□□□ -0.02
VPS9D1-202ENST00000561976 TATDN1Q6P1N9 297 aa14.91□□□□□ -0.02
VPS9D1-202ENST00000561976 GRK7Q8WTQ7 553 aa14.91□□□□□ -0.02
VPS9D1-202ENST00000561976 SLCO2A1Q92959 643 aa14.91□□□□□ -0.02
VPS9D1-202ENST00000561976 MAGEB18Q96M61 343 aa14.91□□□□□ -0.02
VPS9D1-202ENST00000561976 CCDC77Q9BR77 488 aa14.91□□□□□ -0.02
VPS9D1-202ENST00000561976 PITPNM3Q9BZ71 974 aa14.91□□□□□ -0.02
VPS9D1-202ENST00000561976 ETNK1Q9HBU6 452 aa14.91□□□□□ -0.02
VPS9D1-202ENST00000561976 PRKAG3Q9UGI9 489 aa14.91□□□□□ -0.02
VPS9D1-202ENST00000561976 NAALADL1Q9UQQ1 740 aa14.91□□□□□ -0.02
VPS9D1-202ENST00000561976 SPATA31A6Q5VVP1 1343 aa14.91□□□□□ -0.02
VPS9D1-202ENST00000561976 PTK6Q13882 451 aa14.9□□□□□ -0.02
VPS9D1-202ENST00000561976 RBM26Q5T8P6 1007 aaKnown RBP14.9□□□□□ -0.02
VPS9D1-202ENST00000561976 PHLDB2Q86SQ0 1253 aa14.9□□□□□ -0.02
VPS9D1-202ENST00000561976 FBF1Q8TES7 1133 aa14.9□□□□□ -0.02
VPS9D1-202ENST00000561976 NGLY1Q96IV0 654 aa14.9□□□□□ -0.02
VPS9D1-202ENST00000561976 C8orf37Q96NL8 207 aa14.9□□□□□ -0.02
VPS9D1-202ENST00000561976 TRAIPQ9BWF2 469 aa14.9□□□□□ -0.02
VPS9D1-202ENST00000561976 EHMT1Q9H9B1 1298 aa14.9□□□□□ -0.02
VPS9D1-202ENST00000561976 A0A1W2PRG0 241 aa14.9□□□□□ -0.02
VPS9D1-202ENST00000561976 IPO5O00410 1097 aaKnown RBP14.9□□□□□ -0.02
VPS9D1-202ENST00000561976 CDC25CP30307 473 aa14.9□□□□□ -0.02
VPS9D1-202ENST00000561976 MAN1A1P33908 653 aa14.9□□□□□ -0.02
VPS9D1-202ENST00000561976 CDR2Q01850 454 aa14.9□□□□□ -0.02
VPS9D1-202ENST00000561976 CAV1Q03135 178 aa14.9□□□□□ -0.02
VPS9D1-202ENST00000561976 BZW1Q7L1Q6 419 aaKnown RBP14.9□□□□□ -0.02
VPS9D1-202ENST00000561976 MAIP1Q8WWC4 291 aa14.9□□□□□ -0.02
VPS9D1-202ENST00000561976 SHC3Q92529 594 aa14.9□□□□□ -0.02
VPS9D1-202ENST00000561976 KIFAP3Q92845 792 aa14.9□□□□□ -0.02
VPS9D1-202ENST00000561976 ELMO3Q96BJ8 720 aa14.9□□□□□ -0.02
VPS9D1-202ENST00000561976 FAXDC2Q96IV6 333 aa14.9□□□□□ -0.02
VPS9D1-202ENST00000561976 C9orf72Q96LT7 481 aa14.9□□□□□ -0.02
VPS9D1-202ENST00000561976 ZDHHC15Q96MV8 337 aa14.9□□□□□ -0.02
VPS9D1-202ENST00000561976 ZNF570Q96NI8 536 aa14.9□□□□□ -0.02
VPS9D1-202ENST00000561976 SH2D3AQ9BRG2 576 aa14.9□□□□□ -0.02
VPS9D1-202ENST00000561976 ZBTB21Q9ULJ3 1066 aa14.9□□□□□ -0.02
VPS9D1-202ENST00000561976 CDH16O75309 829 aa14.9□□□□□ -0.02
VPS9D1-202ENST00000561976 CETPP11597 493 aa14.9□□□□□ -0.02
VPS9D1-202ENST00000561976 ATP2A2P16615 1042 aaKnown RBP14.9□□□□□ -0.02
VPS9D1-202ENST00000561976 GRIPAP1Q4V328 841 aa14.9□□□□□ -0.02
VPS9D1-202ENST00000561976 ACAD10Q6JQN1 1059 aa14.9□□□□□ -0.02
VPS9D1-202ENST00000561976 PPP1R21Q6ZMI0 780 aa14.9□□□□□ -0.02
VPS9D1-202ENST00000561976 SYDE1Q6ZW31 735 aaPredicted RBP14.9□□□□□ -0.02
VPS9D1-202ENST00000561976 ZNF365Q70YC5 407 aa14.9□□□□□ -0.02
VPS9D1-202ENST00000561976 ASRGL1Q7L266 308 aa14.9□□□□□ -0.02
VPS9D1-202ENST00000561976 MIER3Q7Z3K6 550 aa14.9□□□□□ -0.02
VPS9D1-202ENST00000561976 SEMA4DQ92854 862 aa14.9□□□□□ -0.02
VPS9D1-202ENST00000561976 HEMGNQ9BXL5 484 aa14.9□□□□□ -0.02
VPS9D1-202ENST00000561976 DBNDD1Q9H9R9 158 aa14.9□□□□□ -0.02
VPS9D1-202ENST00000561976 SLC24A3Q9HC58 644 aa14.9□□□□□ -0.02
VPS9D1-202ENST00000561976 KCNQ5Q9NR82 932 aa14.9□□□□□ -0.02
VPS9D1-202ENST00000561976 KCNG1Q9UIX4 513 aa14.9□□□□□ -0.02
VPS9D1-202ENST00000561976 SMCHD1A6NHR9 2005 aa14.89□□□□□ -0.03
VPS9D1-202ENST00000561976 LTBP4Q8N2S1 1624 aa14.89□□□□□ -0.03
VPS9D1-202ENST00000561976 RASA4BC9J798 803 aa14.89□□□□□ -0.03
VPS9D1-202ENST00000561976 RASA4O43374 803 aa14.89□□□□□ -0.03
VPS9D1-202ENST00000561976 KRT5P13647 590 aa14.89□□□□□ -0.03
VPS9D1-202ENST00000561976 IVDP26440 423 aa14.89□□□□□ -0.03
VPS9D1-202ENST00000561976 JAG1P78504 1218 aa14.89□□□□□ -0.03
VPS9D1-202ENST00000561976 IL9RQ01113 521 aa14.89□□□□□ -0.03
VPS9D1-202ENST00000561976 MGAT5Q09328 741 aa14.89□□□□□ -0.03
VPS9D1-202ENST00000561976 TRAF1Q13077 416 aa14.89□□□□□ -0.03
VPS9D1-202ENST00000561976 ALCAMQ13740 583 aa14.89□□□□□ -0.03
VPS9D1-202ENST00000561976 TMED2Q15363 201 aa14.89□□□□□ -0.03
VPS9D1-202ENST00000561976 MTFR1Q15390 333 aa14.89□□□□□ -0.03
VPS9D1-202ENST00000561976 RNF43Q68DV7 783 aa14.89□□□□□ -0.03
VPS9D1-202ENST00000561976 CGB2Q6NT52 195 aa14.89□□□□□ -0.03
VPS9D1-202ENST00000561976 VSIG1Q86XK7 387 aa14.89□□□□□ -0.03
VPS9D1-202ENST00000561976 ECHDC2Q86YB7 292 aa14.89□□□□□ -0.03
VPS9D1-202ENST00000561976 C7orf43Q8WVR3 580 aa14.89□□□□□ -0.03
VPS9D1-202ENST00000561976 FAM118BQ9BPY3 351 aa14.89□□□□□ -0.03
VPS9D1-202ENST00000561976 DCLK3Q9C098 648 aa14.89□□□□□ -0.03
VPS9D1-202ENST00000561976 ADAM22Q9P0K1 906 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms