RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, human

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC28-222	ENST00000561431	FAM43B	Q6ZT52	329 aa	Predicted RBP	5.05	□□□□□ -1.6
LRRC28-222	ENST00000561431	SAPCD2	Q86UD0	394 aa		5.05	□□□□□ -1.6
LRRC28-222	ENST00000561431	FAM124A	Q86V42	546 aa		5.05	□□□□□ -1.6
LRRC28-222	ENST00000561431	CPA6	Q8N4T0	437 aa		5.05	□□□□□ -1.6
LRRC28-222	ENST00000561431	NUDT10	Q8NFP7	164 aa		5.05	□□□□□ -1.6
LRRC28-222	ENST00000561431	SSH1	Q8WYL5	1049 aa		5.05	□□□□□ -1.6
LRRC28-222	ENST00000561431	ZCCHC14	Q8WYQ9	949 aa	Known RBP	5.05	□□□□□ -1.6
LRRC28-222	ENST00000561431	JADE3	Q92613	823 aa		5.05	□□□□□ -1.6
LRRC28-222	ENST00000561431	TSR2	Q969E8	191 aa	Known RBP	5.05	□□□□□ -1.6
LRRC28-222	ENST00000561431	FATE1	Q969F0	183 aa		5.05	□□□□□ -1.6
LRRC28-222	ENST00000561431	NUDT11	Q96G61	164 aa		5.05	□□□□□ -1.6
LRRC28-222	ENST00000561431	LRGUK	Q96M69	825 aa		5.05	□□□□□ -1.6
LRRC28-222	ENST00000561431	UIMC1	Q96RL1	719 aa		5.05	□□□□□ -1.6
LRRC28-222	ENST00000561431	ORAI2	Q96SN7	254 aa		5.05	□□□□□ -1.6
LRRC28-222	ENST00000561431	ADI1	Q9BV57	179 aa		5.05	□□□□□ -1.6
LRRC28-222	ENST00000561431	PITHD1	Q9GZP4	211 aa	Predicted RBP	5.05	□□□□□ -1.6
LRRC28-222	ENST00000561431	CSRNP2	Q9H175	543 aa		5.05	□□□□□ -1.6
LRRC28-222	ENST00000561431	PRDM12	Q9H4Q4	367 aa		5.05	□□□□□ -1.6
LRRC28-222	ENST00000561431	PCDHGA9	Q9Y5G4	932 aa	Known RBP	5.05	□□□□□ -1.6
LRRC28-222	ENST00000561431	PCDHGA8	Q9Y5G5	932 aa		5.05	□□□□□ -1.6
LRRC28-222	ENST00000561431	PCDHGA7	Q9Y5G6	932 aa		5.05	□□□□□ -1.6
LRRC28-222	ENST00000561431	PCDHGA6	Q9Y5G7	932 aa		5.05	□□□□□ -1.6
LRRC28-222	ENST00000561431	PCDHGA3	Q9Y5H0	932 aa		5.05	□□□□□ -1.6
LRRC28-222	ENST00000561431	PCDHGA2	Q9Y5H1	932 aa		5.05	□□□□□ -1.6
LRRC28-222	ENST00000561431	CDY2A	Q9Y6F7	541 aa		5.05	□□□□□ -1.6
LRRC28-222	ENST00000561431	ARHGEF28	Q8N1W1	1705 aa	Known RBP	5.05	□□□□□ -1.6
LRRC28-222	ENST00000561431	KIAA1210	Q9ULL0	1709 aa		5.05	□□□□□ -1.6
LRRC28-222	ENST00000561431	GOLGA6C	A6NDK9	693 aa		5.04	□□□□□ -1.6
LRRC28-222	ENST00000561431	GOLGA6B	A6NDN3	693 aa		5.04	□□□□□ -1.6
LRRC28-222	ENST00000561431	MATN3	O15232	486 aa		5.04	□□□□□ -1.6
LRRC28-222	ENST00000561431	TSPAN6	O43657	245 aa		5.04	□□□□□ -1.6
LRRC28-222	ENST00000561431	SH3BP5	O60239	455 aa		5.04	□□□□□ -1.6
LRRC28-222	ENST00000561431	PRAMEF4	O60810	478 aa		5.04	□□□□□ -1.6
LRRC28-222	ENST00000561431	NDUFS2	O75306	463 aa		5.04	□□□□□ -1.6
LRRC28-222	ENST00000561431	GOLGA6D	P0CG33	693 aa		5.04	□□□□□ -1.6
LRRC28-222	ENST00000561431	ZNF28	P17035	718 aa		5.04	□□□□□ -1.6
LRRC28-222	ENST00000561431	MAGEA10	P43363	369 aa	Predicted RBP	5.04	□□□□□ -1.6
LRRC28-222	ENST00000561431	KCNC1	P48547	511 aa		5.04	□□□□□ -1.6
LRRC28-222	ENST00000561431	SESN2	P58004	480 aa	Predicted RBP	5.04	□□□□□ -1.6
LRRC28-222	ENST00000561431	ANTXR2	P58335	489 aa		5.04	□□□□□ -1.6
LRRC28-222	ENST00000561431	KRT85	P78386	507 aa		5.04	□□□□□ -1.6
LRRC28-222	ENST00000561431	FOXD4	Q12950	439 aa	Predicted RBP	5.04	□□□□□ -1.6
LRRC28-222	ENST00000561431	ODF1	Q14990	250 aa		5.04	□□□□□ -1.6
LRRC28-222	ENST00000561431	ZNF827	Q17R98	1081 aa		5.04	□□□□□ -1.6
LRRC28-222	ENST00000561431	CCDC178	Q5BJE1	867 aa		5.04	□□□□□ -1.6
LRRC28-222	ENST00000561431	MUM1L1	Q5H9M0	696 aa		5.04	□□□□□ -1.6
LRRC28-222	ENST00000561431	GAREM2	Q75VX8	874 aa		5.04	□□□□□ -1.6
LRRC28-222	ENST00000561431	CCAR1	Q8IX12	1150 aa	Known RBP	5.04	□□□□□ -1.6
LRRC28-222	ENST00000561431	FAM9B	Q8IZU0	186 aa		5.04	□□□□□ -1.6
LRRC28-222	ENST00000561431	CARF	Q8N187	725 aa		5.04	□□□□□ -1.6
LRRC28-222	ENST00000561431	MYO1H	Q8N1T3	1032 aa		5.04	□□□□□ -1.6
LRRC28-222	ENST00000561431	GCDH	Q92947	438 aa	Predicted RBP	5.04	□□□□□ -1.6
LRRC28-222	ENST00000561431	GFM2	Q969S9	779 aa	Known RBP	5.04	□□□□□ -1.6
LRRC28-222	ENST00000561431	CARD11	Q9BXL7	1154 aa		5.04	□□□□□ -1.6
LRRC28-222	ENST00000561431	CDH19	Q9H159	772 aa		5.04	□□□□□ -1.6
LRRC28-222	ENST00000561431	GOLGA6A	Q9NYA3	693 aa		5.04	□□□□□ -1.6
LRRC28-222	ENST00000561431	TMPRSS11E	Q9UL52	423 aa		5.04	□□□□□ -1.6
LRRC28-222	ENST00000561431	RPS6KL1	Q9Y6S9	549 aa		5.04	□□□□□ -1.6
LRRC28-222	ENST00000561431	COL22A1	Q8NFW1	1626 aa	Predicted RBP	5.04	□□□□□ -1.6
LRRC28-222	ENST00000561431	JCAD	Q9P266	1359 aa		5.04	□□□□□ -1.6
LRRC28-222	ENST00000561431	CLSPN	Q9HAW4	1339 aa		5.03	□□□□□ -1.6
LRRC28-222	ENST00000561431	KIF1A	Q12756	1690 aa		5.03	□□□□□ -1.6
LRRC28-222	ENST00000561431	PXDN	Q92626	1479 aa		5.03	□□□□□ -1.6
LRRC28-222	ENST00000561431	EXOC5	O00471	708 aa		5.03	□□□□□ -1.6
LRRC28-222	ENST00000561431	KLHL18	O94889	574 aa		5.03	□□□□□ -1.6
LRRC28-222	ENST00000561431	U2AF1L5	P0DN76	240 aa	Predicted RBP	5.03	□□□□□ -1.6
LRRC28-222	ENST00000561431	HNRNPL	P14866	589 aa	Known RBP eCLIP	5.03	□□□□□ -1.6
LRRC28-222	ENST00000561431	GSPT1	P15170	499 aa	Known RBP	5.03	□□□□□ -1.6
LRRC28-222	ENST00000561431	ETV4	P43268	484 aa		5.03	□□□□□ -1.6
LRRC28-222	ENST00000561431	MTNR1B	P49286	362 aa		5.03	□□□□□ -1.6
LRRC28-222	ENST00000561431	U2AF1	Q01081	240 aa	Known RBP eCLIP	5.03	□□□□□ -1.6
LRRC28-222	ENST00000561431	TCIRG1	Q13488	830 aa		5.03	□□□□□ -1.6
LRRC28-222	ENST00000561431	USP10	Q14694	798 aa	Known RBP	5.03	□□□□□ -1.6
LRRC28-222	ENST00000561431	UBXN11	Q5T124	520 aa		5.03	□□□□□ -1.6
LRRC28-222	ENST00000561431	TMEM200B	Q69YZ2	307 aa		5.03	□□□□□ -1.6
LRRC28-222	ENST00000561431	KLHDC10	Q6PID8	442 aa		5.03	□□□□□ -1.6
LRRC28-222	ENST00000561431		Q6ZUG5	572 aa		5.03	□□□□□ -1.6
LRRC28-222	ENST00000561431	GPR155	Q7Z3F1	870 aa		5.03	□□□□□ -1.6
LRRC28-222	ENST00000561431	KCNK18	Q7Z418	384 aa		5.03	□□□□□ -1.6
LRRC28-222	ENST00000561431	TXNDC5	Q8NBS9	432 aa	Known RBP	5.03	□□□□□ -1.6
LRRC28-222	ENST00000561431	SLC16A11	Q8NCK7	471 aa		5.03	□□□□□ -1.6
LRRC28-222	ENST00000561431	PNISR	Q8TF01	805 aa	Known RBP	5.03	□□□□□ -1.6
LRRC28-222	ENST00000561431	PAWR	Q96IZ0	340 aa	Known RBP	5.03	□□□□□ -1.6
LRRC28-222	ENST00000561431	LCOR	Q96JN0	433 aa	Predicted RBP	5.03	□□□□□ -1.6
LRRC28-222	ENST00000561431	SPATA25	Q9BR10	227 aa		5.03	□□□□□ -1.6
LRRC28-222	ENST00000561431	STK26	Q9P289	416 aa		5.03	□□□□□ -1.6
LRRC28-222	ENST00000561431	EVL	Q9UI08	416 aa	Predicted RBP	5.03	□□□□□ -1.6
LRRC28-222	ENST00000561431	TRPM1	Q7Z4N2	1603 aa		5.03	□□□□□ -1.6
LRRC28-222	ENST00000561431	PNPLA6	Q8IY17	1366 aa		5.03	□□□□□ -1.6
LRRC28-222	ENST00000561431	FZD9	O00144	591 aa		5.02	□□□□□ -1.61
LRRC28-222	ENST00000561431	MAF	O75444	373 aa	Predicted RBP	5.02	□□□□□ -1.61
LRRC28-222	ENST00000561431	ABLIM3	O94929	683 aa		5.02	□□□□□ -1.61
LRRC28-222	ENST00000561431	COL6A1	P12109	1028 aa		5.02	□□□□□ -1.61
LRRC28-222	ENST00000561431	C5AR1	P21730	350 aa		5.02	□□□□□ -1.61
LRRC28-222	ENST00000561431	CYP2C19	P33261	490 aa		5.02	□□□□□ -1.61
LRRC28-222	ENST00000561431	MRE11	P49959	708 aa		5.02	□□□□□ -1.61
LRRC28-222	ENST00000561431	ADAM17	P78536	824 aa		5.02	□□□□□ -1.61
LRRC28-222	ENST00000561431	CAP1	Q01518	475 aa		5.02	□□□□□ -1.61
LRRC28-222	ENST00000561431	MALL	Q13021	153 aa		5.02	□□□□□ -1.61
LRRC28-222	ENST00000561431	OS9	Q13438	667 aa	Predicted RBP	5.02	□□□□□ -1.61

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