RNA–Protein interactions for RNA: ENST00000561381.5

USP3-220, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 979 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-220ENST00000561381 MAPK6Q16659 721 aa12.84□□□□□ -0.35
USP3-220ENST00000561381 ERICH6BQ5W0A0 696 aa12.84□□□□□ -0.35
USP3-220ENST00000561381 FLCNQ8NFG4 579 aa12.84□□□□□ -0.35
USP3-220ENST00000561381 ST13P5Q8NFI4 369 aaPredicted RBP12.84□□□□□ -0.35
USP3-220ENST00000561381 KIF2CQ99661 725 aa12.84□□□□□ -0.35
USP3-220ENST00000561381 C2orf40Q9H1Z8 148 aa12.84□□□□□ -0.35
USP3-220ENST00000561381 BHMT2Q9H2M3 363 aa12.84□□□□□ -0.35
USP3-220ENST00000561381 FNIP2Q9P278 1114 aa12.84□□□□□ -0.35
USP3-220ENST00000561381 DUSP12Q9UNI6 340 aa12.84□□□□□ -0.35
USP3-220ENST00000561381 GDAQ9Y2T3 454 aa12.84□□□□□ -0.35
USP3-220ENST00000561381 SF3B1O75533 1304 aaKnown RBP eCLIP12.84□□□□□ -0.35
USP3-220ENST00000561381 ADAM12O43184 909 aa12.83□□□□□ -0.36
USP3-220ENST00000561381 GFRA3O60609 400 aa12.83□□□□□ -0.36
USP3-220ENST00000561381 PAPLNO95428 1278 aa12.83□□□□□ -0.36
USP3-220ENST00000561381 THP07101 528 aa12.83□□□□□ -0.36
USP3-220ENST00000561381 HOXB1P14653 301 aaPredicted RBP12.83□□□□□ -0.36
USP3-220ENST00000561381 RBM25P49756 843 aaKnown RBP12.83□□□□□ -0.36
USP3-220ENST00000561381 TOB1P50616 345 aaPredicted RBP12.83□□□□□ -0.36
USP3-220ENST00000561381 ORC2Q13416 577 aaPredicted RBP12.83□□□□□ -0.36
USP3-220ENST00000561381 NT5DC1Q5TFE4 455 aa12.83□□□□□ -0.36
USP3-220ENST00000561381 FAM171A1Q5VUB5 890 aa12.83□□□□□ -0.36
USP3-220ENST00000561381 CEP57Q86XR8 500 aa12.83□□□□□ -0.36
USP3-220ENST00000561381 SIX5Q8N196 739 aa12.83□□□□□ -0.36
USP3-220ENST00000561381 CLSTN3Q9BQT9 956 aa12.83□□□□□ -0.36
USP3-220ENST00000561381 RHOBTB2Q9BYZ6 727 aa12.83□□□□□ -0.36
USP3-220ENST00000561381 PRKD2Q9BZL6 878 aa12.83□□□□□ -0.36
USP3-220ENST00000561381 PLEKHA4Q9H4M7 779 aa12.83□□□□□ -0.36
USP3-220ENST00000561381 PIDD1Q9HB75 910 aa12.83□□□□□ -0.36
USP3-220ENST00000561381 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.83□□□□□ -0.36
USP3-220ENST00000561381 DPP7Q9UHL4 492 aa12.83□□□□□ -0.36
USP3-220ENST00000561381 FBXL21Q9UKT6 434 aa12.83□□□□□ -0.36
USP3-220ENST00000561381 KIAA1024Q9UPX6 916 aa12.83□□□□□ -0.36
USP3-220ENST00000561381 PP2D1A8MPX8 630 aa12.82□□□□□ -0.36
USP3-220ENST00000561381 EIF5BO60841 1220 aaKnown RBP12.82□□□□□ -0.36
USP3-220ENST00000561381 CFHP08603 1231 aa12.82□□□□□ -0.36
USP3-220ENST00000561381 CLCN5P51795 746 aa12.82□□□□□ -0.36
USP3-220ENST00000561381 HMGN5P82970 282 aaKnown RBP12.82□□□□□ -0.36
USP3-220ENST00000561381 GNL2Q13823 731 aaKnown RBP12.82□□□□□ -0.36
USP3-220ENST00000561381 PPP2R5AQ15172 486 aa12.82□□□□□ -0.36
USP3-220ENST00000561381 GLRA4Q5JXX5 417 aa12.82□□□□□ -0.36
USP3-220ENST00000561381 HAUS3Q68CZ6 603 aa12.82□□□□□ -0.36
USP3-220ENST00000561381 ELMSAN1Q6PJG2 1045 aa12.82□□□□□ -0.36
USP3-220ENST00000561381 TMEM92Q6UXU6 159 aa12.82□□□□□ -0.36
USP3-220ENST00000561381 CYP26C1Q6V0L0 522 aa12.82□□□□□ -0.36
USP3-220ENST00000561381 GET4Q7L5D6 327 aaPredicted RBP12.82□□□□□ -0.36
USP3-220ENST00000561381 GPR65Q8IYL9 337 aa12.82□□□□□ -0.36
USP3-220ENST00000561381 FAM184AQ8NB25 1140 aa12.82□□□□□ -0.36
USP3-220ENST00000561381 LNX1Q8TBB1 728 aaPredicted RBP12.82□□□□□ -0.36
USP3-220ENST00000561381 HDAC7Q8WUI4 952 aa12.82□□□□□ -0.36
USP3-220ENST00000561381 STAMQ92783 540 aa12.82□□□□□ -0.36
USP3-220ENST00000561381 ADPGKQ9BRR6 497 aa12.82□□□□□ -0.36
USP3-220ENST00000561381 TTPALQ9BTX7 342 aa12.82□□□□□ -0.36
USP3-220ENST00000561381 DDX19AQ9NUU7 478 aaKnown RBP12.82□□□□□ -0.36
USP3-220ENST00000561381 ZDHHC7Q9NXF8 308 aa12.82□□□□□ -0.36
USP3-220ENST00000561381 IGSF9Q9P2J2 1179 aa12.82□□□□□ -0.36
USP3-220ENST00000561381 EPS15L1Q9UBC2 864 aa12.82□□□□□ -0.36
USP3-220ENST00000561381 LRWD1Q9UFC0 647 aa12.82□□□□□ -0.36
USP3-220ENST00000561381 PCDHB6Q9Y5E3 794 aa12.82□□□□□ -0.36
USP3-220ENST00000561381 VWA8A3KMH1 1905 aa12.82□□□□□ -0.36
USP3-220ENST00000561381 TRIP11Q15643 1979 aa12.81□□□□□ -0.36
USP3-220ENST00000561381 KRBA1A5PL33 1030 aa12.81□□□□□ -0.36
USP3-220ENST00000561381 ZMYND10O75800 440 aa12.81□□□□□ -0.36
USP3-220ENST00000561381 MUTP22033 750 aa12.81□□□□□ -0.36
USP3-220ENST00000561381 CDC25AP30304 524 aa12.81□□□□□ -0.36
USP3-220ENST00000561381 TRAPPC10P48553 1259 aa12.81□□□□□ -0.36
USP3-220ENST00000561381 NTHL1P78549 312 aa12.81□□□□□ -0.36
USP3-220ENST00000561381 PTGDRQ13258 359 aa12.81□□□□□ -0.36
USP3-220ENST00000561381 PSMD5Q16401 504 aa12.81□□□□□ -0.36
USP3-220ENST00000561381 IL17AQ16552 155 aa12.81□□□□□ -0.36
USP3-220ENST00000561381 ATF7IP2Q5U623 682 aa12.81□□□□□ -0.36
USP3-220ENST00000561381 CD300LGQ6UXG3 332 aa12.81□□□□□ -0.36
USP3-220ENST00000561381 SLC44A3Q8N4M1 653 aa12.81□□□□□ -0.36
USP3-220ENST00000561381 CEP120Q8N960 986 aa12.81□□□□□ -0.36
USP3-220ENST00000561381 SNX29Q8TEQ0 813 aa12.81□□□□□ -0.36
USP3-220ENST00000561381 PIK3R5Q8WYR1 880 aa12.81□□□□□ -0.36
USP3-220ENST00000561381 IFT74Q96LB3 600 aa12.81□□□□□ -0.36
USP3-220ENST00000561381 ZSCAN31Q96LW9 406 aaPredicted RBP12.81□□□□□ -0.36
USP3-220ENST00000561381 MFRPQ9BY79 579 aa12.81□□□□□ -0.36
USP3-220ENST00000561381 IRF2BPLQ9H1B7 796 aa12.81□□□□□ -0.36
USP3-220ENST00000561381 GOLGA2P5Q9HBQ8 144 aa12.81□□□□□ -0.36
USP3-220ENST00000561381 FBXW11Q9UKB1 542 aa12.81□□□□□ -0.36
USP3-220ENST00000561381 NOL7Q9UMY1 257 aaKnown RBP12.81□□□□□ -0.36
USP3-220ENST00000561381 USP34Q70CQ2 3546 aa12.8□□□□□ -0.36
USP3-220ENST00000561381 E9PMD0 336 aa12.8□□□□□ -0.36
USP3-220ENST00000561381 B3GAT3O94766 335 aa12.8□□□□□ -0.36
USP3-220ENST00000561381 C1RP00736 705 aa12.8□□□□□ -0.36
USP3-220ENST00000561381 LAMP2P13473 410 aa12.8□□□□□ -0.36
USP3-220ENST00000561381 AOC1P19801 751 aa12.8□□□□□ -0.36
USP3-220ENST00000561381 U2AF2P26368 475 aaKnown RBP eCLIP12.8□□□□□ -0.362e-8■■□□□ 13.8
USP3-220ENST00000561381 CREMQ03060 361 aa12.8□□□□□ -0.36
USP3-220ENST00000561381 DCAF4L1Q3SXM0 396 aa12.8□□□□□ -0.36
USP3-220ENST00000561381 GRASPQ7Z6J2 395 aaPredicted RBP12.8□□□□□ -0.36
USP3-220ENST00000561381 DAW1Q8N136 415 aa12.8□□□□□ -0.36
USP3-220ENST00000561381 IGSF22Q8N9C0 903 aa12.8□□□□□ -0.36
USP3-220ENST00000561381 KIFAP3Q92845 792 aa12.8□□□□□ -0.36
USP3-220ENST00000561381 PPP1R10Q96QC0 940 aaKnown RBP12.8□□□□□ -0.36
USP3-220ENST00000561381 RUSC1Q9BVN2 902 aa12.8□□□□□ -0.36
USP3-220ENST00000561381 SH2B1Q9NRF2 756 aaPredicted RBP12.8□□□□□ -0.36
USP3-220ENST00000561381 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.8□□□□□ -0.36
USP3-220ENST00000561381 CA14Q9ULX7 337 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms