RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 RPP25Q9BUL9 199 aaKnown RBP13.07□□□□□ -0.32
CARMIL3-204ENST00000561354 PDZD7Q9H5P4 517 aa13.07□□□□□ -0.32
CARMIL3-204ENST00000561354 SNTG2Q9NY99 539 aa13.07□□□□□ -0.32
CARMIL3-204ENST00000561354 R4GN57 208 aa13.07□□□□□ -0.32
CARMIL3-204ENST00000561354 SPTBN4Q9H254 2564 aa13.07□□□□□ -0.32
CARMIL3-204ENST00000561354 GVINP1Q7Z2Y8 2422 aa13.07□□□□□ -0.32
CARMIL3-204ENST00000561354 TTLL13PA6NNM8 815 aa13.06□□□□□ -0.32
CARMIL3-204ENST00000561354 ACKR2O00590 384 aa13.06□□□□□ -0.32
CARMIL3-204ENST00000561354 XYLBO75191 536 aa13.06□□□□□ -0.32
CARMIL3-204ENST00000561354 RECQL4O94761 1208 aa13.06□□□□□ -0.32
CARMIL3-204ENST00000561354 SP9P0CG40 484 aa13.06□□□□□ -0.32
CARMIL3-204ENST00000561354 NAMPTP43490 491 aa13.06□□□□□ -0.32
CARMIL3-204ENST00000561354 ME3Q16798 604 aa13.06□□□□□ -0.32
CARMIL3-204ENST00000561354 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.06□□□□□ -0.32
CARMIL3-204ENST00000561354 PIAS4Q8N2W9 510 aaPredicted RBP13.06□□□□□ -0.32
CARMIL3-204ENST00000561354 NECAB1Q8N987 351 aa13.06□□□□□ -0.32
CARMIL3-204ENST00000561354 NSUN7Q8NE18 718 aaKnown RBP13.06□□□□□ -0.32
CARMIL3-204ENST00000561354 BORCS6Q96GS4 357 aa13.06□□□□□ -0.32
CARMIL3-204ENST00000561354 ADPGKQ9BRR6 497 aa13.06□□□□□ -0.32
CARMIL3-204ENST00000561354 POLR3CQ9BUI4 534 aaPredicted RBP13.06□□□□□ -0.32
CARMIL3-204ENST00000561354 DDX23Q9BUQ8 820 aaKnown RBP13.06□□□□□ -0.32
CARMIL3-204ENST00000561354 CCDC113Q9H0I3 377 aa13.06□□□□□ -0.32
CARMIL3-204ENST00000561354 TMEM60Q9H2L4 133 aa13.06□□□□□ -0.32
CARMIL3-204ENST00000561354 DOCK6Q96HP0 2047 aa13.05□□□□□ -0.32
CARMIL3-204ENST00000561354 KANSL1LA0AUZ9 987 aa13.05□□□□□ -0.32
CARMIL3-204ENST00000561354 TMEM189-UBE2V1I3L0A0 370 aa13.05□□□□□ -0.32
CARMIL3-204ENST00000561354 ADAM12O43184 909 aa13.05□□□□□ -0.32
CARMIL3-204ENST00000561354 MED24O75448 989 aa13.05□□□□□ -0.32
CARMIL3-204ENST00000561354 PRKCBP05771 671 aa13.05□□□□□ -0.32
CARMIL3-204ENST00000561354 GLULP15104 373 aa13.05□□□□□ -0.32
CARMIL3-204ENST00000561354 CYP11B2P19099 503 aa13.05□□□□□ -0.32
CARMIL3-204ENST00000561354 FGFR3P22607 806 aa13.05□□□□□ -0.32
CARMIL3-204ENST00000561354 RPA1P27694 616 aa13.05□□□□□ -0.32
CARMIL3-204ENST00000561354 RBM25P49756 843 aaKnown RBP13.05□□□□□ -0.32
CARMIL3-204ENST00000561354 NTHL1P78549 312 aa13.05□□□□□ -0.32
CARMIL3-204ENST00000561354 PRKCQQ04759 706 aa13.05□□□□□ -0.32
CARMIL3-204ENST00000561354 TRIM29Q14134 588 aa13.05□□□□□ -0.32
CARMIL3-204ENST00000561354 PPP2R5AQ15172 486 aa13.05□□□□□ -0.32
CARMIL3-204ENST00000561354 TMEM132AQ24JP5 1023 aa13.05□□□□□ -0.32
CARMIL3-204ENST00000561354 AXDND1Q5T1B0 1012 aaPredicted RBP13.05□□□□□ -0.32
CARMIL3-204ENST00000561354 PADI6Q6TGC4 694 aa13.05□□□□□ -0.32
CARMIL3-204ENST00000561354 NOSTRINQ8IVI9 506 aa13.05□□□□□ -0.32
CARMIL3-204ENST00000561354 ST13P5Q8NFI4 369 aaPredicted RBP13.05□□□□□ -0.32
CARMIL3-204ENST00000561354 BSNDQ8WZ55 320 aa13.05□□□□□ -0.32
CARMIL3-204ENST00000561354 OSBPL6Q9BZF3 934 aa13.05□□□□□ -0.32
CARMIL3-204ENST00000561354 FOXQ1Q9C009 403 aa13.05□□□□□ -0.32
CARMIL3-204ENST00000561354 CXCL16Q9H2A7 254 aa13.05□□□□□ -0.32
CARMIL3-204ENST00000561354 KCNH3Q9ULD8 1083 aa13.05□□□□□ -0.32
CARMIL3-204ENST00000561354 FANCMQ8IYD8 2048 aa13.05□□□□□ -0.32
CARMIL3-204ENST00000561354 CCL16O15467 120 aa13.04□□□□□ -0.32
CARMIL3-204ENST00000561354 MUTP22033 750 aa13.04□□□□□ -0.32
CARMIL3-204ENST00000561354 OR1D2P34982 312 aa13.04□□□□□ -0.32
CARMIL3-204ENST00000561354 PFKPQ01813 784 aa13.04□□□□□ -0.32
CARMIL3-204ENST00000561354 SNW1Q13573 536 aaKnown RBP13.04□□□□□ -0.32
CARMIL3-204ENST00000561354 ZNF528Q3MIS6 628 aa13.04□□□□□ -0.32
CARMIL3-204ENST00000561354 DCAF4L1Q3SXM0 396 aa13.04□□□□□ -0.32
CARMIL3-204ENST00000561354 SLC44A4Q53GD3 710 aa13.04□□□□□ -0.32
CARMIL3-204ENST00000561354 RSPO2Q6UXX9 243 aaPredicted RBP13.04□□□□□ -0.32
CARMIL3-204ENST00000561354 MAML2Q8IZL2 1156 aaPredicted RBP13.04□□□□□ -0.32
CARMIL3-204ENST00000561354 ERMNQ8TAM6 284 aa13.04□□□□□ -0.32
CARMIL3-204ENST00000561354 DEPTORQ8TB45 409 aa13.04□□□□□ -0.32
CARMIL3-204ENST00000561354 SLC7A14Q8TBB6 771 aa13.04□□□□□ -0.32
CARMIL3-204ENST00000561354 RUBCNQ92622 972 aa13.04□□□□□ -0.32
CARMIL3-204ENST00000561354 BCO2Q9BYV7 579 aa13.04□□□□□ -0.32
CARMIL3-204ENST00000561354 MTRRQ9UBK8 725 aa13.04□□□□□ -0.32
CARMIL3-204ENST00000561354 POLIQ9UNA4 740 aa13.04□□□□□ -0.32
CARMIL3-204ENST00000561354 BACE2Q9Y5Z0 518 aa13.04□□□□□ -0.32
CARMIL3-204ENST00000561354 MYH15Q9Y2K3 1946 aa13.03□□□□□ -0.32
CARMIL3-204ENST00000561354 ARHGEF35A5YM69 484 aa13.03□□□□□ -0.32
CARMIL3-204ENST00000561354 LRRN2O75325 713 aa13.03□□□□□ -0.32
CARMIL3-204ENST00000561354 B3GAT3O94766 335 aa13.03□□□□□ -0.32
CARMIL3-204ENST00000561354 LARGE1O95461 756 aa13.03□□□□□ -0.32
CARMIL3-204ENST00000561354 EDN1P05305 212 aa13.03□□□□□ -0.32
CARMIL3-204ENST00000561354 MCM7P33993 719 aa13.03□□□□□ -0.32
CARMIL3-204ENST00000561354 EFNA5P52803 228 aa13.03□□□□□ -0.32
CARMIL3-204ENST00000561354 ORC2Q13416 577 aaPredicted RBP13.03□□□□□ -0.32
CARMIL3-204ENST00000561354 MLF2Q15773 248 aaPredicted RBP13.03□□□□□ -0.32
CARMIL3-204ENST00000561354 PABPC1LQ4VXU2 614 aaKnown RBP13.03□□□□□ -0.32
CARMIL3-204ENST00000561354 EEF1DP3Q658K8 133 aa13.03□□□□□ -0.32
CARMIL3-204ENST00000561354 NPAS3Q8IXF0 933 aa13.03□□□□□ -0.32
CARMIL3-204ENST00000561354 ITFG1Q8TB96 612 aa13.03□□□□□ -0.32
CARMIL3-204ENST00000561354 RMDN1Q96DB5 314 aa13.03□□□□□ -0.32
CARMIL3-204ENST00000561354 UROC1Q96N76 676 aa13.03□□□□□ -0.32
CARMIL3-204ENST00000561354 PPP1R10Q96QC0 940 aaKnown RBP13.03□□□□□ -0.32
CARMIL3-204ENST00000561354 DNMT3BQ9UBC3 853 aaKnown RBP13.03□□□□□ -0.32
CARMIL3-204ENST00000561354 FBXO4Q9UKT5 387 aa13.03□□□□□ -0.32
CARMIL3-204ENST00000561354 USP20Q9Y2K6 914 aa13.03□□□□□ -0.32
CARMIL3-204ENST00000561354 GDAQ9Y2T3 454 aa13.03□□□□□ -0.32
CARMIL3-204ENST00000561354 EP300Q09472 2414 aaPredicted RBP13.03□□□□□ -0.32
CARMIL3-204ENST00000561354 VWA8A3KMH1 1905 aa13.03□□□□□ -0.32
CARMIL3-204ENST00000561354 TRAPPC3O43617 180 aa13.02□□□□□ -0.33
CARMIL3-204ENST00000561354 JAK2O60674 1132 aa13.02□□□□□ -0.33
CARMIL3-204ENST00000561354 MAGEA9P43362 315 aa13.02□□□□□ -0.33
CARMIL3-204ENST00000561354 CLCNKBP51801 687 aa13.02□□□□□ -0.33
CARMIL3-204ENST00000561354 SAFBQ15424 915 aaKnown RBP eCLIP13.02□□□□□ -0.33
CARMIL3-204ENST00000561354 UPP1Q16831 310 aa13.02□□□□□ -0.33
CARMIL3-204ENST00000561354 CD300LGQ6UXG3 332 aa13.02□□□□□ -0.33
CARMIL3-204ENST00000561354 ANKS3Q6ZW76 656 aa13.02□□□□□ -0.33
CARMIL3-204ENST00000561354 APBB1IPQ7Z5R6 666 aaPredicted RBP13.02□□□□□ -0.33
CARMIL3-204ENST00000561354 KIAA2013Q8IYS2 634 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms