RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 PDE6CP51160 858 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 CCR9P51686 369 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 HK3P52790 923 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 ARFIP2P53365 341 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 RARSP54136 660 aaKnown RBP2.27□□□□□ -2.05
RTF1-207ENST00000561076 ALDH18A1P54886 795 aaKnown RBP2.27□□□□□ -2.05
RTF1-207ENST00000561076 SESN2P58004 480 aaPredicted RBP2.27□□□□□ -2.05
RTF1-207ENST00000561076 ACTR2P61160 394 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 PSMC1P62191 440 aaKnown RBP2.27□□□□□ -2.05
RTF1-207ENST00000561076 RAC1P63000 192 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 AP2B1P63010 937 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 GNAI1P63096 354 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 ZNF200P98182 395 aaPredicted RBP2.27□□□□□ -2.05
RTF1-207ENST00000561076 SATB1Q01826 763 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 SLC6A3Q01959 620 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 EIF4A2Q14240 407 aaKnown RBP2.27□□□□□ -2.05
RTF1-207ENST00000561076 HABP2Q14520 560 aaPredicted RBP2.27□□□□□ -2.05
RTF1-207ENST00000561076 SLMAPQ14BN4 828 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 SEC23AQ15436 765 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 SURF1Q15526 300 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 PTPN14Q15678 1187 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 RAB30Q15771 203 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 TSTQ16762 297 aaKnown RBP2.27□□□□□ -2.05
RTF1-207ENST00000561076 INF2Q27J81 1249 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 DNAJC21Q5F1R6 531 aaKnown RBP2.27□□□□□ -2.05
RTF1-207ENST00000561076 C3orf38Q5JPI3 329 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 PITRM1Q5JRX3 1037 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 UBXN11Q5T124 520 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 TRAPPC3LQ5T215 181 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 MEX3CQ5U5Q3 659 aaKnown RBP2.27□□□□□ -2.05
RTF1-207ENST00000561076 RRAGBQ5VZM2 374 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 NUGGCQ68CJ6 796 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 SLFN12LQ6IEE8 588 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 NAA16Q6N069 864 aaPredicted RBP2.27□□□□□ -2.05
RTF1-207ENST00000561076 KIAA1841Q6NSI8 718 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 CYP4F22Q6NT55 531 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 JMJD6Q6NYC1 403 aaPredicted RBP2.27□□□□□ -2.05
RTF1-207ENST00000561076 ZNF449Q6P9G9 518 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 SHQ1Q6PI26 577 aaKnown RBP2.27□□□□□ -2.05
RTF1-207ENST00000561076 BTNL9Q6UXG8 535 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 ATF7IPQ6VMQ6 1270 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 FAM47EQ6ZV65 393 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 SV2AQ7L0J3 742 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 KRT74Q7RTS7 529 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 KCNK18Q7Z418 384 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 UBE3DQ7Z6J8 389 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 CABP7Q86V35 215 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 CREG2Q8IUH2 290 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 GLB1L2Q8IW92 636 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 BRSK2Q8IWQ3 736 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 TRIM48Q8IWZ4 208 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 DMRTC2Q8IXT2 367 aaPredicted RBP2.27□□□□□ -2.05
RTF1-207ENST00000561076 YAF2Q8IY57 180 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 KIAA2013Q8IYS2 634 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 NUP93Q8N1F7 819 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 C17orf53Q8N3J3 647 aaPredicted RBP2.27□□□□□ -2.05
RTF1-207ENST00000561076 NGEFQ8N5V2 710 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 TOP6BLQ8N6T0 577 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 GOLGA6L1Q8N7Z2 621 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 CDYL2Q8N8U2 506 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 DTWD2Q8NBA8 298 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 PIP4K2CQ8TBX8 421 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 SPPL3Q8TCT6 385 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 ADAMTS18Q8TE60 1221 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 UBASH3BQ8TF42 649 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 STYXQ8WUJ0 223 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 ANKS1AQ92625 1134 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 SECISBP2LQ93073 1101 aaKnown RBP2.27□□□□□ -2.05
RTF1-207ENST00000561076 C3orf49Q96BT1 292 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 OTUD5Q96G74 571 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 TCTN2Q96GX1 697 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 HIC2Q96JB3 615 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 TMX3Q96JJ7 454 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 HIST1H2AHQ96KK5 128 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 SNX27Q96L92 541 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 SNX22Q96L94 193 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 NOX5Q96PH1 765 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 GBP4Q96PP9 640 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 ASB2Q96Q27 587 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 EYA3Q99504 573 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 HIST1H2AJQ99878 128 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 PTPN18Q99952 460 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 MCMBPQ9BTE3 642 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 SLC12A9Q9BXP2 914 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 FTOQ9C0B1 505 aaKnown RBP eCLIP2.27□□□□□ -2.05
RTF1-207ENST00000561076 XPO4Q9C0E2 1151 aaKnown RBP2.27□□□□□ -2.05
RTF1-207ENST00000561076 GHITMQ9H3K2 345 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 SMARCAD1Q9H4L7 1026 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 WDCPQ9H6R7 721 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 SLAMF7Q9NQ25 335 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 PFDN4Q9NQP4 134 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 CCDC177Q9NQR7 707 aaPredicted RBP2.27□□□□□ -2.05
RTF1-207ENST00000561076 INCENPQ9NQS7 918 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 RBM12Q9NTZ6 932 aaKnown RBP2.27□□□□□ -2.05
RTF1-207ENST00000561076 PDRG1Q9NUG6 133 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 TAB2Q9NYJ8 693 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 CAMSAP3Q9P1Y5 1249 aaPredicted RBP2.27□□□□□ -2.05
RTF1-207ENST00000561076 MYO1AQ9UBC5 1043 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 NIPSNAP3AQ9UFN0 247 aaPredicted RBP2.27□□□□□ -2.05
RTF1-207ENST00000561076 TBC1D29Q9UFV1 150 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms