RNA–Protein interactions for RNA: ENST00000561071.5

MARK3-223, Transcript of microtubule affinity regulating kinase 3, human

TSL 3

Gene MARK3, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-223	ENST00000561071	NPHS1	O60500	1241 aa		8.38	□□□□□ -1.07
MARK3-223	ENST00000561071	FLOT1	O75955	427 aa		8.38	□□□□□ -1.07
MARK3-223	ENST00000561071	GLRX3	O76003	335 aa	Known RBP	8.38	□□□□□ -1.07
MARK3-223	ENST00000561071	TAL1	P17542	331 aa	Predicted RBP	8.38	□□□□□ -1.07
MARK3-223	ENST00000561071	CNGA1	P29973	690 aa		8.38	□□□□□ -1.07
MARK3-223	ENST00000561071	ICA1	Q05084	483 aa		8.38	□□□□□ -1.07
MARK3-223	ENST00000561071	GRB14	Q14449	540 aa		8.38	□□□□□ -1.07
MARK3-223	ENST00000561071	SNX17	Q15036	470 aa		8.38	□□□□□ -1.07
MARK3-223	ENST00000561071	KCNMB1	Q16558	191 aa		8.38	□□□□□ -1.07
MARK3-223	ENST00000561071	PRAMEF19	Q5SWL8	479 aa		8.38	□□□□□ -1.07
MARK3-223	ENST00000561071	XP32	Q5T750	250 aa		8.38	□□□□□ -1.07
MARK3-223	ENST00000561071	ZSCAN25	Q6NSZ9	544 aa		8.38	□□□□□ -1.07
MARK3-223	ENST00000561071	C16orf86	Q6ZW13	317 aa		8.38	□□□□□ -1.07
MARK3-223	ENST00000561071	KBTBD3	Q8NAB2	608 aa		8.38	□□□□□ -1.07
MARK3-223	ENST00000561071	DCAF4	Q8WV16	495 aa		8.38	□□□□□ -1.07
MARK3-223	ENST00000561071	FAM168A	Q92567	244 aa		8.38	□□□□□ -1.07
MARK3-223	ENST00000561071	VCPKMT	Q9H867	229 aa		8.38	□□□□□ -1.07
MARK3-223	ENST00000561071	HOXC10	Q9NYD6	342 aa		8.38	□□□□□ -1.07
MARK3-223	ENST00000561071	PCDHA2	Q9Y5H9	948 aa		8.38	□□□□□ -1.07
MARK3-223	ENST00000561071	ALPK3	Q96L96	1907 aa		8.37	□□□□□ -1.07
MARK3-223	ENST00000561071	PFAS	O15067	1338 aa		8.37	□□□□□ -1.07
MARK3-223	ENST00000561071	PPP1R12A	O14974	1030 aa	Predicted RBP	8.37	□□□□□ -1.07
MARK3-223	ENST00000561071	SDHB	P21912	280 aa		8.37	□□□□□ -1.07
MARK3-223	ENST00000561071	ADORA2A	P29274	412 aa		8.37	□□□□□ -1.07
MARK3-223	ENST00000561071	BCL6	P41182	706 aa		8.37	□□□□□ -1.07
MARK3-223	ENST00000561071	CYP4F8	P98187	520 aa		8.37	□□□□□ -1.07
MARK3-223	ENST00000561071	CBX2	Q14781	532 aa	Predicted RBP	8.37	□□□□□ -1.07
MARK3-223	ENST00000561071	TMEM132B	Q14DG7	1078 aa		8.37	□□□□□ -1.07
MARK3-223	ENST00000561071	LRRC26	Q2I0M4	334 aa		8.37	□□□□□ -1.07
MARK3-223	ENST00000561071	MFSD14C	Q5VZR4	134 aa		8.37	□□□□□ -1.07
MARK3-223	ENST00000561071	ANO1	Q5XXA6	986 aa		8.37	□□□□□ -1.07
MARK3-223	ENST00000561071	DPP9	Q86TI2	863 aa		8.37	□□□□□ -1.07
MARK3-223	ENST00000561071	TEX2	Q8IWB9	1127 aa		8.37	□□□□□ -1.07
MARK3-223	ENST00000561071	AMOTL1	Q8IY63	956 aa		8.37	□□□□□ -1.07
MARK3-223	ENST00000561071	CCDC17	Q96LX7	622 aa		8.37	□□□□□ -1.07
MARK3-223	ENST00000561071	SEC62	Q99442	399 aa	Known RBP	8.37	□□□□□ -1.07
MARK3-223	ENST00000561071	NUP88	Q99567	741 aa	Predicted RBP	8.37	□□□□□ -1.07
MARK3-223	ENST00000561071	SPATC1L	Q9H0A9	340 aa		8.37	□□□□□ -1.07
MARK3-223	ENST00000561071	MARCH2	Q9P0N8	246 aa		8.37	□□□□□ -1.07
MARK3-223	ENST00000561071	TMA7	Q9Y2S6	64 aa	Known RBP	8.37	□□□□□ -1.07
MARK3-223	ENST00000561071	YBX2	Q9Y2T7	364 aa	Known RBP	8.37	□□□□□ -1.07
MARK3-223	ENST00000561071	GPAA1	O43292	621 aa		8.36	□□□□□ -1.07
MARK3-223	ENST00000561071	PRDM1	O75626	825 aa		8.36	□□□□□ -1.07
MARK3-223	ENST00000561071	ASMTL	O95671	621 aa		8.36	□□□□□ -1.07
MARK3-223	ENST00000561071	APP	P05067	770 aa		8.36	□□□□□ -1.07
MARK3-223	ENST00000561071	PGK2	P07205	417 aa		8.36	□□□□□ -1.07
MARK3-223	ENST00000561071	GLI1	P08151	1106 aa		8.36	□□□□□ -1.07
MARK3-223	ENST00000561071	HOXC6	P09630	235 aa		8.36	□□□□□ -1.07
MARK3-223	ENST00000561071	COL6A1	P12109	1028 aa		8.36	□□□□□ -1.07
MARK3-223	ENST00000561071	CAPN2	P17655	700 aa		8.36	□□□□□ -1.07
MARK3-223	ENST00000561071	CORO7	P57737	925 aa		8.36	□□□□□ -1.07
MARK3-223	ENST00000561071	FAM83B	Q5T0W9	1011 aa		8.36	□□□□□ -1.07
MARK3-223	ENST00000561071	APPBP2	Q92624	585 aa		8.36	□□□□□ -1.07
MARK3-223	ENST00000561071	CHMP4C	Q96CF2	233 aa		8.36	□□□□□ -1.07
MARK3-223	ENST00000561071	GPATCH3	Q96I76	525 aa		8.36	□□□□□ -1.07
MARK3-223	ENST00000561071	MTA3	Q9BTC8	594 aa		8.36	□□□□□ -1.07
MARK3-223	ENST00000561071	NCOA5	Q9HCD5	579 aa	Known RBP	8.36	□□□□□ -1.07
MARK3-223	ENST00000561071	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	8.36	□□□□□ -1.07
MARK3-223	ENST00000561071	GPR27	Q9NS67	375 aa		8.36	□□□□□ -1.07
MARK3-223	ENST00000561071	TIMM13	Q9Y5L4	95 aa	Predicted RBP	8.36	□□□□□ -1.07
MARK3-223	ENST00000561071	RLF	Q13129	1914 aa		8.36	□□□□□ -1.07
MARK3-223	ENST00000561071	LAMA3	Q16787	3333 aa		8.35	□□□□□ -1.07
MARK3-223	ENST00000561071	CCDC163	A0A0D9SF12	145 aa		8.35	□□□□□ -1.07
MARK3-223	ENST00000561071	ZNF503-AS2	A6NEH8	195 aa		8.35	□□□□□ -1.07
MARK3-223	ENST00000561071	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	8.35	□□□□□ -1.07
MARK3-223	ENST00000561071	WDR46	O15213	610 aa	Known RBP	8.35	□□□□□ -1.07
MARK3-223	ENST00000561071	STRN	O43815	780 aa		8.35	□□□□□ -1.07
MARK3-223	ENST00000561071	FUCA1	P04066	466 aa		8.35	□□□□□ -1.07
MARK3-223	ENST00000561071	PNLIP	P16233	465 aa		8.35	□□□□□ -1.07
MARK3-223	ENST00000561071	JUNB	P17275	347 aa	Predicted RBP	8.35	□□□□□ -1.07
MARK3-223	ENST00000561071	FPR2	P25090	351 aa		8.35	□□□□□ -1.07
MARK3-223	ENST00000561071	MAGEA10	P43363	369 aa	Predicted RBP	8.35	□□□□□ -1.07
MARK3-223	ENST00000561071	TDO2	P48775	406 aa		8.35	□□□□□ -1.07
MARK3-223	ENST00000561071	RPL11	P62913	178 aa	Known RBP	8.35	□□□□□ -1.07
MARK3-223	ENST00000561071	TKFC	Q3LXA3	575 aa		8.35	□□□□□ -1.07
MARK3-223	ENST00000561071	SBK1	Q52WX2	424 aa		8.35	□□□□□ -1.07
MARK3-223	ENST00000561071	GJC2	Q5T442	439 aa	Predicted RBP	8.35	□□□□□ -1.07
MARK3-223	ENST00000561071	HOMER1	Q86YM7	354 aa		8.35	□□□□□ -1.07
MARK3-223	ENST00000561071	MB21D1	Q8N884	522 aa		8.35	□□□□□ -1.07
MARK3-223	ENST00000561071	SHCBP1	Q8NEM2	672 aa		8.35	□□□□□ -1.07
MARK3-223	ENST00000561071	LPAR1	Q92633	364 aa		8.35	□□□□□ -1.07
MARK3-223	ENST00000561071	PTPRN2	Q92932	1015 aa		8.35	□□□□□ -1.07
MARK3-223	ENST00000561071	LIN37	Q96GY3	246 aa	Predicted RBP	8.35	□□□□□ -1.07
MARK3-223	ENST00000561071	INTS4	Q96HW7	963 aa	Known RBP	8.35	□□□□□ -1.07
MARK3-223	ENST00000561071	CHAMP1	Q96JM3	812 aa		8.35	□□□□□ -1.07
MARK3-223	ENST00000561071	GDF15	Q99988	308 aa		8.35	□□□□□ -1.07
MARK3-223	ENST00000561071	SENP6	Q9GZR1	1112 aa	Predicted RBP	8.35	□□□□□ -1.07
MARK3-223	ENST00000561071	MROH8	Q9H579	483 aa		8.35	□□□□□ -1.07
MARK3-223	ENST00000561071	SH2D4A	Q9H788	454 aa		8.35	□□□□□ -1.07
MARK3-223	ENST00000561071	CRTAC1	Q9NQ79	661 aa		8.35	□□□□□ -1.07
MARK3-223	ENST00000561071	INCENP	Q9NQS7	918 aa		8.35	□□□□□ -1.07
MARK3-223	ENST00000561071	PDLIM7	Q9NR12	457 aa		8.35	□□□□□ -1.07
MARK3-223	ENST00000561071	PPARGC1A	Q9UBK2	798 aa	Known RBP	8.35	□□□□□ -1.07
MARK3-223	ENST00000561071	ARPP21	Q9UBL0	812 aa	Predicted RBP	8.35	□□□□□ -1.07
MARK3-223	ENST00000561071	CLIP2	Q9UDT6	1046 aa		8.35	□□□□□ -1.07
MARK3-223	ENST00000561071	NDOR1	Q9UHB4	597 aa		8.35	□□□□□ -1.07
MARK3-223	ENST00000561071	DDX20	Q9UHI6	824 aa	Known RBP	8.35	□□□□□ -1.07
MARK3-223	ENST00000561071	DNAH12	Q6ZR08	3092 aa		8.34	□□□□□ -1.07
MARK3-223	ENST00000561071		F5H6K3	240 aa		8.34	□□□□□ -1.07
MARK3-223	ENST00000561071	VWA5A	O00534	786 aa		8.34	□□□□□ -1.07

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