RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 ASIC4Q96FT7 647 aa17.53■□□□□ 0.4
LMX1B-204ENST00000561065 TMEM134Q9H6X4 195 aa17.53■□□□□ 0.4
LMX1B-204ENST00000561065 GOLGA2P5Q9HBQ8 144 aa17.53■□□□□ 0.4
LMX1B-204ENST00000561065 NR2E1Q9Y466 385 aa17.53■□□□□ 0.4
LMX1B-204ENST00000561065 TMEM221A6NGB7 291 aa17.52■□□□□ 0.4
LMX1B-204ENST00000561065 M0R296 226 aa17.52■□□□□ 0.4
LMX1B-204ENST00000561065 RFPL2O75678 378 aa17.52■□□□□ 0.4
LMX1B-204ENST00000561065 SYT1P21579 422 aa17.52■□□□□ 0.4
LMX1B-204ENST00000561065 GRM5P41594 1212 aa17.52■□□□□ 0.4
LMX1B-204ENST00000561065 SOX4Q06945 474 aaPredicted RBP17.52■□□□□ 0.4
LMX1B-204ENST00000561065 ARSHQ5FYA8 562 aa17.52■□□□□ 0.4
LMX1B-204ENST00000561065 CD300LGQ6UXG3 332 aa17.52■□□□□ 0.4
LMX1B-204ENST00000561065 TDRD5Q8NAT2 981 aaKnown RBP17.52■□□□□ 0.4
LMX1B-204ENST00000561065 TMEM161BQ8NDZ6 487 aa17.52■□□□□ 0.4
LMX1B-204ENST00000561065 CALML4Q96GE6 196 aa17.52■□□□□ 0.4
LMX1B-204ENST00000561065 MRPL4Q9BYD3 311 aaKnown RBP17.52■□□□□ 0.4
LMX1B-204ENST00000561065 BLOC1S4Q9NUP1 217 aa17.52■□□□□ 0.4
LMX1B-204ENST00000561065 SSX2IPQ9Y2D8 614 aa17.52■□□□□ 0.4
LMX1B-204ENST00000561065 TGM5O43548 720 aa17.51■□□□□ 0.39
LMX1B-204ENST00000561065 TADA2AO75478 443 aa17.51■□□□□ 0.39
LMX1B-204ENST00000561065 ASGR2P07307 311 aa17.51■□□□□ 0.39
LMX1B-204ENST00000561065 SPATA31D3P0C874 917 aa17.51■□□□□ 0.39
LMX1B-204ENST00000561065 PLS3P13797 630 aa17.51■□□□□ 0.39
LMX1B-204ENST00000561065 UBA7P41226 1012 aa17.51■□□□□ 0.39
LMX1B-204ENST00000561065 OSTNP61366 133 aa17.51■□□□□ 0.39
LMX1B-204ENST00000561065 SF3A1Q15459 793 aaKnown RBP17.51■□□□□ 0.39
LMX1B-204ENST00000561065 ATAT1Q5SQI0 421 aa17.51■□□□□ 0.39
LMX1B-204ENST00000561065 C15orf39Q6ZRI6 1047 aa17.51■□□□□ 0.39
LMX1B-204ENST00000561065 SPATA31D4Q6ZUB0 917 aa17.51■□□□□ 0.39
LMX1B-204ENST00000561065 ZBTB33Q86T24 672 aa17.51■□□□□ 0.39
LMX1B-204ENST00000561065 PALB2Q86YC2 1186 aa17.51■□□□□ 0.39
LMX1B-204ENST00000561065 C3orf58Q8NDZ4 430 aa17.51■□□□□ 0.39
LMX1B-204ENST00000561065 CMASQ8NFW8 434 aaPredicted RBP17.51■□□□□ 0.39
LMX1B-204ENST00000561065 SPIRE2Q8WWL2 714 aa17.51■□□□□ 0.39
LMX1B-204ENST00000561065 ZNF707Q96C28 371 aaPredicted RBP17.51■□□□□ 0.39
LMX1B-204ENST00000561065 ZBTB45Q96K62 511 aaPredicted RBP17.51■□□□□ 0.39
LMX1B-204ENST00000561065 SNX27Q96L92 541 aa17.51■□□□□ 0.39
LMX1B-204ENST00000561065 ZMAT2Q96NC0 199 aaKnown RBP17.51■□□□□ 0.39
LMX1B-204ENST00000561065 TIPINQ9BVW5 301 aa17.51■□□□□ 0.39
LMX1B-204ENST00000561065 C17orf75Q9HAS0 396 aa17.51■□□□□ 0.39
LMX1B-204ENST00000561065 ARIH1Q9Y4X5 557 aaPredicted RBP17.51■□□□□ 0.39
LMX1B-204ENST00000561065 SPDYE4A6NLX3 237 aa17.5■□□□□ 0.39
LMX1B-204ENST00000561065 ADAM12O43184 909 aa17.5■□□□□ 0.39
LMX1B-204ENST00000561065 N4BP1O75113 896 aaKnown RBP17.5■□□□□ 0.39
LMX1B-204ENST00000561065 PAPLNO95428 1278 aa17.5■□□□□ 0.39
LMX1B-204ENST00000561065 BRD1O95696 1058 aa17.5■□□□□ 0.39
LMX1B-204ENST00000561065 MAPTP10636 758 aaKnown RBP17.5■□□□□ 0.39
LMX1B-204ENST00000561065 PLCG1P19174 1290 aa17.5■□□□□ 0.39
LMX1B-204ENST00000561065 LONP1P36776 959 aaKnown RBP17.5■□□□□ 0.39
LMX1B-204ENST00000561065 CLCNKBP51801 687 aa17.5■□□□□ 0.39
LMX1B-204ENST00000561065 SIGLEC14Q08ET2 396 aa17.5■□□□□ 0.39
LMX1B-204ENST00000561065 RESTQ13127 1097 aa17.5■□□□□ 0.39
LMX1B-204ENST00000561065 XKR4Q5GH76 650 aa17.5■□□□□ 0.39
LMX1B-204ENST00000561065 FAM171A1Q5VUB5 890 aa17.5■□□□□ 0.39
LMX1B-204ENST00000561065 LILRA6Q6PI73 481 aa17.5■□□□□ 0.39
LMX1B-204ENST00000561065 ALKAL1Q6UXT8 129 aa17.5■□□□□ 0.39
LMX1B-204ENST00000561065 APBB1IPQ7Z5R6 666 aaPredicted RBP17.5■□□□□ 0.39
LMX1B-204ENST00000561065 GPR65Q8IYL9 337 aa17.5■□□□□ 0.39
LMX1B-204ENST00000561065 KREMEN2Q8NCW0 462 aa17.5■□□□□ 0.39
LMX1B-204ENST00000561065 RASSF8Q8NHQ8 419 aa17.5■□□□□ 0.39
LMX1B-204ENST00000561065 PIK3R5Q8WYR1 880 aa17.5■□□□□ 0.39
LMX1B-204ENST00000561065 REEP2Q9BRK0 252 aa17.5■□□□□ 0.39
LMX1B-204ENST00000561065 NTPCRQ9BSD7 190 aaKnown RBP17.5■□□□□ 0.39
LMX1B-204ENST00000561065 HAPLN2Q9GZV7 340 aa17.5■□□□□ 0.39
LMX1B-204ENST00000561065 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.5■□□□□ 0.39
LMX1B-204ENST00000561065 FNIP2Q9P278 1114 aa17.5■□□□□ 0.39
LMX1B-204ENST00000561065 USTQ9Y2C2 406 aa17.5■□□□□ 0.39
LMX1B-204ENST00000561065 RBM19Q9Y4C8 960 aaKnown RBP17.5■□□□□ 0.39
LMX1B-204ENST00000561065 ANK1P16157 1881 aa17.5■□□□□ 0.39
LMX1B-204ENST00000561065 SMIM28A0A1B0GU29 152 aa17.49■□□□□ 0.39
LMX1B-204ENST00000561065 TMEM189-UBE2V1I3L0A0 370 aa17.49■□□□□ 0.39
LMX1B-204ENST00000561065 STX6O43752 255 aa17.49■□□□□ 0.39
LMX1B-204ENST00000561065 HARSP12081 509 aaKnown RBP17.49■□□□□ 0.39
LMX1B-204ENST00000561065 KARSQ15046 597 aaKnown RBP17.49■□□□□ 0.39
LMX1B-204ENST00000561065 PTPAQ15257 358 aa17.49■□□□□ 0.39
LMX1B-204ENST00000561065 FAM173BQ6P4H8 233 aa17.49■□□□□ 0.39
LMX1B-204ENST00000561065 MPZL3Q6UWV2 235 aa17.49■□□□□ 0.39
LMX1B-204ENST00000561065 CCDC149Q6ZUS6 474 aa17.49■□□□□ 0.39
LMX1B-204ENST00000561065 BMP8AQ7Z5Y6 402 aa17.49■□□□□ 0.39
LMX1B-204ENST00000561065 ZDHHC14Q8IZN3 488 aa17.49■□□□□ 0.39
LMX1B-204ENST00000561065 TMEM130Q8N3G9 435 aa17.49■□□□□ 0.39
LMX1B-204ENST00000561065 LNX1Q8TBB1 728 aaPredicted RBP17.49■□□□□ 0.39
LMX1B-204ENST00000561065 CLSTN3Q9BQT9 956 aa17.49■□□□□ 0.39
LMX1B-204ENST00000561065 TTPALQ9BTX7 342 aa17.49■□□□□ 0.39
LMX1B-204ENST00000561065 ANKFY1Q9P2R3 1169 aa17.49■□□□□ 0.39
LMX1B-204ENST00000561065 CLIC4Q9Y696 253 aa17.49■□□□□ 0.39
LMX1B-204ENST00000561065 CCDC195A0A1B0GUA6 201 aa17.48■□□□□ 0.39
LMX1B-204ENST00000561065 PDGFBP01127 241 aaPredicted RBP17.48■□□□□ 0.39
LMX1B-204ENST00000561065 MCF2P10911 925 aa17.48■□□□□ 0.39
LMX1B-204ENST00000561065 NCKAP1LP55160 1127 aa17.48■□□□□ 0.39
LMX1B-204ENST00000561065 PSMD5Q16401 504 aa17.48■□□□□ 0.39
LMX1B-204ENST00000561065 UPP1Q16831 310 aa17.48■□□□□ 0.39
LMX1B-204ENST00000561065 SEZ6Q53EL9 994 aa17.48■□□□□ 0.39
LMX1B-204ENST00000561065 USP49Q70CQ1 688 aa17.48■□□□□ 0.39
LMX1B-204ENST00000561065 GPBP1Q86WP2 473 aa17.48■□□□□ 0.39
LMX1B-204ENST00000561065 FAM122AQ96E09 287 aa17.48■□□□□ 0.39
LMX1B-204ENST00000561065 CCDC94Q9BW85 323 aaPredicted RBP17.48■□□□□ 0.39
LMX1B-204ENST00000561065 KCND2Q9NZV8 630 aa17.48■□□□□ 0.39
LMX1B-204ENST00000561065 FBXW11Q9UKB1 542 aa17.48■□□□□ 0.39
LMX1B-204ENST00000561065 SORCS3Q9UPU3 1222 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms