RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 TDRD15B5MCY1 1934 aaKnown RBP20.55■□□□□ 0.88
TPM1-226ENST00000560959 CCL16O15467 120 aa20.55■□□□□ 0.88
TPM1-226ENST00000560959 MARCH6O60337 910 aa20.55■□□□□ 0.88
TPM1-226ENST00000560959 BAG4O95429 457 aaKnown RBP20.55■□□□□ 0.88
TPM1-226ENST00000560959 TGM1P22735 817 aa20.55■□□□□ 0.88
TPM1-226ENST00000560959 GLRA2P23416 452 aa20.55■□□□□ 0.88
TPM1-226ENST00000560959 TOB2Q14106 344 aaPredicted RBP20.55■□□□□ 0.88
TPM1-226ENST00000560959 AXDND1Q5T1B0 1012 aaPredicted RBP20.55■□□□□ 0.88
TPM1-226ENST00000560959 NCAPH2Q6IBW4 605 aa20.55■□□□□ 0.88
TPM1-226ENST00000560959 PPP4R3CPQ6ZMV5 832 aa20.55■□□□□ 0.88
TPM1-226ENST00000560959 RUFY3Q7L099 469 aa20.55■□□□□ 0.88
TPM1-226ENST00000560959 NPAS3Q8IXF0 933 aa20.55■□□□□ 0.88
TPM1-226ENST00000560959 RABGGTAQ92696 567 aa20.55■□□□□ 0.88
TPM1-226ENST00000560959 PAAF1Q9BRP4 392 aa20.55■□□□□ 0.88
TPM1-226ENST00000560959 AVENQ9NQS1 362 aaPredicted RBP20.55■□□□□ 0.88
TPM1-226ENST00000560959 CDV3Q9UKY7 258 aaKnown RBP20.55■□□□□ 0.88
TPM1-226ENST00000560959 POLIQ9UNA4 740 aa20.55■□□□□ 0.88
TPM1-226ENST00000560959 KMT2BQ9UMN6 2715 aaPredicted RBP20.54■□□□□ 0.88
TPM1-226ENST00000560959 B4GALT5O43286 388 aa20.54■□□□□ 0.88
TPM1-226ENST00000560959 KRT37O76014 449 aa20.54■□□□□ 0.88
TPM1-226ENST00000560959 THP07101 528 aa20.54■□□□□ 0.88
TPM1-226ENST00000560959 NRLP54845 237 aa20.54■□□□□ 0.88
TPM1-226ENST00000560959 CYP4A11Q02928 519 aa20.54■□□□□ 0.88
TPM1-226ENST00000560959 ADCY1Q08828 1119 aa20.54■□□□□ 0.88
TPM1-226ENST00000560959 FZD5Q13467 585 aa20.54■□□□□ 0.88
TPM1-226ENST00000560959 PABPC1LQ4VXU2 614 aaKnown RBP20.54■□□□□ 0.88
TPM1-226ENST00000560959 CEP57Q86XR8 500 aa20.54■□□□□ 0.88
TPM1-226ENST00000560959 SLC7A14Q8TBB6 771 aa20.54■□□□□ 0.88
TPM1-226ENST00000560959 AIFM3Q96NN9 605 aa20.54■□□□□ 0.88
TPM1-226ENST00000560959 PRMT7Q9NVM4 692 aaPredicted RBP20.54■□□□□ 0.88
TPM1-226ENST00000560959 DNMT3BQ9UBC3 853 aaKnown RBP20.54■□□□□ 0.88
TPM1-226ENST00000560959 MIA3Q5JRA6 1907 aa20.53■□□□□ 0.88
TPM1-226ENST00000560959 KIF4AO95239 1232 aa20.53■□□□□ 0.88
TPM1-226ENST00000560959 XRCC6P12956 609 aaKnown RBP eCLIP20.53■□□□□ 0.88
TPM1-226ENST00000560959 XBP1P17861 261 aa20.53■□□□□ 0.88
TPM1-226ENST00000560959 CD72P21854 359 aa20.53■□□□□ 0.88
TPM1-226ENST00000560959 TARSP26639 723 aaKnown RBP20.53■□□□□ 0.88
TPM1-226ENST00000560959 IRX6P78412 446 aaPredicted RBP20.53■□□□□ 0.88
TPM1-226ENST00000560959 FAM187BQ17R55 369 aa20.53■□□□□ 0.88
TPM1-226ENST00000560959 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.53■□□□□ 0.88
TPM1-226ENST00000560959 TPRG1Q6ZUI0 275 aa20.53■□□□□ 0.88
TPM1-226ENST00000560959 KXD1Q9BQD3 176 aa20.53■□□□□ 0.88
TPM1-226ENST00000560959 EIF2AK1Q9BQI3 630 aaKnown RBP20.53■□□□□ 0.88
TPM1-226ENST00000560959 IER2Q9BTL4 223 aa20.53■□□□□ 0.88
TPM1-226ENST00000560959 ZSWIM6Q9HCJ5 1215 aa20.53■□□□□ 0.88
TPM1-226ENST00000560959 KCNJ14Q9UNX9 436 aa20.53■□□□□ 0.88
TPM1-226ENST00000560959 PTGESO14684 152 aa20.52■□□□□ 0.88
TPM1-226ENST00000560959 ADAM12O43184 909 aa20.52■□□□□ 0.88
TPM1-226ENST00000560959 NAB2Q15742 525 aa20.52■□□□□ 0.88
TPM1-226ENST00000560959 CDR2LQ86X02 465 aaPredicted RBP20.52■□□□□ 0.88
TPM1-226ENST00000560959 HASPINQ8TF76 798 aa20.52■□□□□ 0.88
TPM1-226ENST00000560959 DNASE1L2Q92874 299 aa20.52■□□□□ 0.88
TPM1-226ENST00000560959 FZD8Q9H461 694 aa20.52■□□□□ 0.88
TPM1-226ENST00000560959 MTRRQ9UBK8 725 aa20.52■□□□□ 0.88
TPM1-226ENST00000560959 CACNG4Q9UBN1 327 aa20.52■□□□□ 0.88
TPM1-226ENST00000560959 GMEB2Q9UKD1 530 aa20.52■□□□□ 0.88
TPM1-226ENST00000560959 MYH15Q9Y2K3 1946 aa20.52■□□□□ 0.88
TPM1-226ENST00000560959 ACACBO00763 2458 aa20.51■□□□□ 0.87
TPM1-226ENST00000560959 DOCK6Q96HP0 2047 aa20.51■□□□□ 0.87
TPM1-226ENST00000560959 CASTOR2A6NHX0 329 aa20.51■□□□□ 0.87
TPM1-226ENST00000560959 TMEM189-UBE2V1I3L0A0 370 aa20.51■□□□□ 0.87
TPM1-226ENST00000560959 MAN2B1O00754 1011 aa20.51■□□□□ 0.87
TPM1-226ENST00000560959 FGFR3P22607 806 aa20.51■□□□□ 0.87
TPM1-226ENST00000560959 OR1D2P34982 312 aa20.51■□□□□ 0.87
TPM1-226ENST00000560959 RBM25P49756 843 aaKnown RBP20.51■□□□□ 0.87
TPM1-226ENST00000560959 RARRES1P49788 294 aa20.51■□□□□ 0.87
TPM1-226ENST00000560959 PPP2R5DQ14738 602 aa20.51■□□□□ 0.87
TPM1-226ENST00000560959 PIK3AP1Q6ZUJ8 805 aa20.51■□□□□ 0.87
TPM1-226ENST00000560959 POTEDQ86YR6 584 aa20.51■□□□□ 0.87
TPM1-226ENST00000560959 CELF5Q8N6W0 485 aaKnown RBP20.51■□□□□ 0.87
TPM1-226ENST00000560959 ELSPBP1Q96BH3 223 aa20.51■□□□□ 0.87
TPM1-226ENST00000560959 HCFC1R1Q9NWW0 138 aa20.51■□□□□ 0.87
TPM1-226ENST00000560959 PCDHA12Q9UN75 941 aa20.51■□□□□ 0.87
TPM1-226ENST00000560959 MRPS23Q9Y3D9 190 aaKnown RBP20.51■□□□□ 0.87
TPM1-226ENST00000560959 BACE2Q9Y5Z0 518 aa20.51■□□□□ 0.87
TPM1-226ENST00000560959 PATJQ8NI35 1801 aa20.5■□□□□ 0.87
TPM1-226ENST00000560959 SHISA7A6NL88 538 aa20.5■□□□□ 0.87
TPM1-226ENST00000560959 N4BP3O15049 544 aa20.5■□□□□ 0.87
TPM1-226ENST00000560959 EPB41L2O43491 1005 aaKnown RBP20.5■□□□□ 0.87
TPM1-226ENST00000560959 CDCA2Q69YH5 1023 aaPredicted RBP20.5■□□□□ 0.87
TPM1-226ENST00000560959 ZNF687Q8N1G0 1237 aa20.5■□□□□ 0.87
TPM1-226ENST00000560959 POLR3FQ9H1D9 316 aaPredicted RBP20.5■□□□□ 0.87
TPM1-226ENST00000560959 USP18Q9UMW8 372 aa20.5■□□□□ 0.87
TPM1-226ENST00000560959 LRP3O75074 770 aa20.49■□□□□ 0.87
TPM1-226ENST00000560959 CDKL5O76039 1030 aa20.49■□□□□ 0.87
TPM1-226ENST00000560959 MICAL2O94851 1124 aa20.49■□□□□ 0.87
TPM1-226ENST00000560959 REC8O95072 547 aa20.49■□□□□ 0.87
TPM1-226ENST00000560959 RHOP08100 348 aa20.49■□□□□ 0.87
TPM1-226ENST00000560959 ADRB1P08588 477 aa20.49■□□□□ 0.87
TPM1-226ENST00000560959 TDGF1P13385 188 aa20.49■□□□□ 0.87
TPM1-226ENST00000560959 MTAPQ13126 283 aa20.49■□□□□ 0.87
TPM1-226ENST00000560959 CCDC43Q96MW1 224 aaKnown RBP20.49■□□□□ 0.87
TPM1-226ENST00000560959 PLA2G2FQ9BZM2 168 aa20.49■□□□□ 0.87
TPM1-226ENST00000560959 CHRDQ9H2X0 955 aa20.49■□□□□ 0.87
TPM1-226ENST00000560959 TRPV5Q9NQA5 729 aa20.49■□□□□ 0.87
TPM1-226ENST00000560959 HEBP1Q9NRV9 189 aa20.49■□□□□ 0.87
TPM1-226ENST00000560959 SNTG2Q9NY99 539 aa20.49■□□□□ 0.87
TPM1-226ENST00000560959 CYP46A1Q9Y6A2 500 aa20.49■□□□□ 0.87
TPM1-226ENST00000560959 ARHGEF37A1IGU5 675 aa20.48■□□□□ 0.87
TPM1-226ENST00000560959 DCDC2BA2VCK2 349 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 158.5 ms