RNA–Protein interactions for RNA: ENST00000560861.1

SNX1-212, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-212ENST00000560861 UBXN11Q5T124 520 aa12.24□□□□□ -0.45
SNX1-212ENST00000560861 KRT39Q6A163 491 aa12.24□□□□□ -0.45
SNX1-212ENST00000560861 IQCEQ6IPM2 695 aa12.24□□□□□ -0.45
SNX1-212ENST00000560861 TRAF7Q6Q0C0 670 aa12.24□□□□□ -0.45
SNX1-212ENST00000560861 RAD9BQ6WBX8 426 aa12.24□□□□□ -0.45
SNX1-212ENST00000560861 CATSPER4Q7RTX7 472 aa12.24□□□□□ -0.45
SNX1-212ENST00000560861 CTU1Q7Z7A3 348 aaKnown RBP12.24□□□□□ -0.45
SNX1-212ENST00000560861 FAM228AQ86W67 206 aa12.24□□□□□ -0.45
SNX1-212ENST00000560861 OR5B17Q8NGF7 314 aa12.24□□□□□ -0.45
SNX1-212ENST00000560861 TAS1R2Q8TE23 839 aa12.24□□□□□ -0.45
SNX1-212ENST00000560861 SYN2Q92777 582 aaPredicted RBP12.24□□□□□ -0.45
SNX1-212ENST00000560861 GLT1D1Q96MS3 346 aa12.24□□□□□ -0.45
SNX1-212ENST00000560861 SCLT1Q96NL6 688 aa12.24□□□□□ -0.45
SNX1-212ENST00000560861 TCHPQ9BT92 498 aa12.24□□□□□ -0.45
SNX1-212ENST00000560861 CRISPLD2Q9H0B8 497 aa12.24□□□□□ -0.45
SNX1-212ENST00000560861 TRMT13Q9NUP7 481 aaKnown RBP12.24□□□□□ -0.45
SNX1-212ENST00000560861 MYO6Q9UM54 1294 aa12.24□□□□□ -0.45
SNX1-212ENST00000560861 PLAGL2Q9UPG8 496 aa12.24□□□□□ -0.45
SNX1-212ENST00000560861 NOC2LQ9Y3T9 749 aaKnown RBP12.24□□□□□ -0.45
SNX1-212ENST00000560861 A0A0U1RQG5 324 aaPredicted RBP12.23□□□□□ -0.45
SNX1-212ENST00000560861 LRRC53A6NM62 1247 aa12.23□□□□□ -0.45
SNX1-212ENST00000560861 RBAK-RBAKDNI3L0D1 243 aa12.23□□□□□ -0.45
SNX1-212ENST00000560861 ARHGAP6O43182 974 aa12.23□□□□□ -0.45
SNX1-212ENST00000560861 ZNF500O60304 480 aaPredicted RBP12.23□□□□□ -0.45
SNX1-212ENST00000560861 B4GALT4O60513 344 aa12.23□□□□□ -0.45
SNX1-212ENST00000560861 ERLIN2O94905 339 aa12.23□□□□□ -0.45
SNX1-212ENST00000560861 VNN1O95497 513 aa12.23□□□□□ -0.45
SNX1-212ENST00000560861 STAG3L1P0CL83 205 aa12.23□□□□□ -0.45
SNX1-212ENST00000560861 GRM5P41594 1212 aa12.23□□□□□ -0.45
SNX1-212ENST00000560861 MATR3P43243 847 aaKnown RBP eCLIP12.23□□□□□ -0.45
SNX1-212ENST00000560861 POLR2FP61218 127 aaKnown RBP12.23□□□□□ -0.45
SNX1-212ENST00000560861 SURF1Q15526 300 aa12.23□□□□□ -0.45
SNX1-212ENST00000560861 SLC9C1Q4G0N8 1177 aa12.23□□□□□ -0.45
SNX1-212ENST00000560861 TDRD10Q5VZ19 366 aaKnown RBP12.23□□□□□ -0.45
SNX1-212ENST00000560861 HGSNATQ68CP4 663 aa12.23□□□□□ -0.45
SNX1-212ENST00000560861 PHLDB3Q6NSJ2 640 aa12.23□□□□□ -0.45
SNX1-212ENST00000560861 GJB7Q6PEY0 223 aa12.23□□□□□ -0.45
SNX1-212ENST00000560861 USP37Q86T82 979 aa12.23□□□□□ -0.45
SNX1-212ENST00000560861 RSPH3Q86UC2 560 aa12.23□□□□□ -0.45
SNX1-212ENST00000560861 WDR49Q8IV35 697 aa12.23□□□□□ -0.45
SNX1-212ENST00000560861 EFCAB13Q8IY85 973 aa12.23□□□□□ -0.45
SNX1-212ENST00000560861 THNSL1Q8IYQ7 743 aa12.23□□□□□ -0.45
SNX1-212ENST00000560861 ARMC5Q96C12 935 aa12.23□□□□□ -0.45
SNX1-212ENST00000560861 ZNF333Q96JL9 665 aa12.23□□□□□ -0.45
SNX1-212ENST00000560861 DEFB118Q96PH6 123 aa12.23□□□□□ -0.45
SNX1-212ENST00000560861 CHP1Q99653 195 aa12.23□□□□□ -0.45
SNX1-212ENST00000560861 SEZ6LQ9BYH1 1024 aa12.23□□□□□ -0.45
SNX1-212ENST00000560861 OSBPL7Q9BZF2 842 aa12.23□□□□□ -0.45
SNX1-212ENST00000560861 GPR88Q9GZN0 384 aa12.23□□□□□ -0.45
SNX1-212ENST00000560861 MKI67P46013 3256 aaKnown RBP12.23□□□□□ -0.45
SNX1-212ENST00000560861 ARVCFO00192 962 aa12.22□□□□□ -0.45
SNX1-212ENST00000560861 CAND2O75155 1236 aa12.22□□□□□ -0.45
SNX1-212ENST00000560861 IL18RAPO95256 599 aa12.22□□□□□ -0.45
SNX1-212ENST00000560861 CXCL8P10145 99 aa12.22□□□□□ -0.45
SNX1-212ENST00000560861 DLATP10515 647 aaKnown RBP12.22□□□□□ -0.45
SNX1-212ENST00000560861 RFX1P22670 979 aa12.22□□□□□ -0.45
SNX1-212ENST00000560861 AP3M2P53677 418 aa12.22□□□□□ -0.45
SNX1-212ENST00000560861 MTF1Q14872 753 aa12.22□□□□□ -0.45
SNX1-212ENST00000560861 SLC10A6Q3KNW5 377 aa12.22□□□□□ -0.45
SNX1-212ENST00000560861 LMBRD2Q68DH5 695 aaPredicted RBP12.22□□□□□ -0.45
SNX1-212ENST00000560861 NOTUMQ6P988 496 aa12.22□□□□□ -0.45
SNX1-212ENST00000560861 SLC27A1Q6PCB7 646 aa12.22□□□□□ -0.45
SNX1-212ENST00000560861 FBXO46Q6PJ61 603 aaPredicted RBP12.22□□□□□ -0.45
SNX1-212ENST00000560861 RRAGAQ7L523 313 aa12.22□□□□□ -0.45
SNX1-212ENST00000560861 TMTC1Q8IUR5 882 aa12.22□□□□□ -0.45
SNX1-212ENST00000560861 ARHGEF19Q8IW93 802 aa12.22□□□□□ -0.45
SNX1-212ENST00000560861 C17orf53Q8N3J3 647 aaPredicted RBP12.22□□□□□ -0.45
SNX1-212ENST00000560861 FBXL13Q8NEE6 735 aa12.22□□□□□ -0.45
SNX1-212ENST00000560861 OLIG1Q8TAK6 271 aa12.22□□□□□ -0.45
SNX1-212ENST00000560861 CXorf38Q8TB03 319 aa12.22□□□□□ -0.45
SNX1-212ENST00000560861 EIF2AQ9BY44 585 aaKnown RBP12.22□□□□□ -0.45
SNX1-212ENST00000560861 ERVK-5Q9HDB9 667 aa12.22□□□□□ -0.45
SNX1-212ENST00000560861 NLRC4Q9NPP4 1024 aa12.22□□□□□ -0.45
SNX1-212ENST00000560861 STARD7Q9NQZ5 370 aa12.22□□□□□ -0.45
SNX1-212ENST00000560861 SPTLC3Q9NUV7 552 aa12.22□□□□□ -0.45
SNX1-212ENST00000560861 AIPL1Q9NZN9 384 aa12.22□□□□□ -0.45
SNX1-212ENST00000560861 APEX2Q9UBZ4 518 aa12.22□□□□□ -0.45
SNX1-212ENST00000560861 GINS2Q9Y248 185 aa12.22□□□□□ -0.45
SNX1-212ENST00000560861 MROH7Q68CQ1 1323 aa12.21□□□□□ -0.45
SNX1-212ENST00000560861 SOWAHDA6NJG2 315 aa12.21□□□□□ -0.45
SNX1-212ENST00000560861 CCDC85CA6NKD9 419 aa12.21□□□□□ -0.45
SNX1-212ENST00000560861 KBTBD13C9JR72 458 aa12.21□□□□□ -0.45
SNX1-212ENST00000560861 ZC3H11AO75152 810 aaKnown RBP eCLIP12.21□□□□□ -0.45
SNX1-212ENST00000560861 NPTXRO95502 500 aa12.21□□□□□ -0.45
SNX1-212ENST00000560861 HLA-DRAP01903 254 aa12.21□□□□□ -0.45
SNX1-212ENST00000560861 TMEM132AQ24JP5 1023 aa12.21□□□□□ -0.45
SNX1-212ENST00000560861 FBXO47Q5MNV8 452 aa12.21□□□□□ -0.45
SNX1-212ENST00000560861 SCARA3Q6AZY7 606 aa12.21□□□□□ -0.45
SNX1-212ENST00000560861 CYP26C1Q6V0L0 522 aa12.21□□□□□ -0.45
SNX1-212ENST00000560861 IRF2BP2Q7Z5L9 587 aa12.21□□□□□ -0.45
SNX1-212ENST00000560861 ZNF397Q8NF99 534 aaPredicted RBP12.21□□□□□ -0.45
SNX1-212ENST00000560861 HELQQ8TDG4 1101 aa12.21□□□□□ -0.45
SNX1-212ENST00000560861 KREMEN1Q96MU8 473 aa12.21□□□□□ -0.45
SNX1-212ENST00000560861 FNBP1Q96RU3 617 aa12.21□□□□□ -0.45
SNX1-212ENST00000560861 STK33Q9BYT3 514 aa12.21□□□□□ -0.45
SNX1-212ENST00000560861 TRPV6Q9H1D0 765 aa12.21□□□□□ -0.45
SNX1-212ENST00000560861 NUCKS1Q9H1E3 243 aaKnown RBP12.21□□□□□ -0.45
SNX1-212ENST00000560861 ASB7Q9H672 318 aa12.21□□□□□ -0.45
SNX1-212ENST00000560861 AGO3Q9H9G7 860 aaKnown RBP12.21□□□□□ -0.45
SNX1-212ENST00000560861 RPF1Q9H9Y2 349 aaKnown RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms