RNA–Protein interactions for RNA: ENST00000560828.5

CPNE6-217, Transcript of copine 6, humanhuman

TSL 4

Gene CPNE6, Length 589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-217ENST00000560828 CDT1Q9H211 546 aa18.51■□□□□ 0.55
CPNE6-217ENST00000560828 TOPORSQ9NS56 1045 aaPredicted RBP18.51■□□□□ 0.55
CPNE6-217ENST00000560828 CCDC195A0A1B0GUA6 201 aa18.5■□□□□ 0.55
CPNE6-217ENST00000560828 TGM5O43548 720 aa18.5■□□□□ 0.55
CPNE6-217ENST00000560828 BMP15O95972 392 aa18.5■□□□□ 0.55
CPNE6-217ENST00000560828 PLS3P13797 630 aa18.5■□□□□ 0.55
CPNE6-217ENST00000560828 YARSP54577 528 aaKnown RBP18.5■□□□□ 0.55
CPNE6-217ENST00000560828 ZNF568Q3ZCX4 644 aa18.5■□□□□ 0.55
CPNE6-217ENST00000560828 TMEM119Q4V9L6 283 aa18.5■□□□□ 0.55
CPNE6-217ENST00000560828 FAM171A1Q5VUB5 890 aa18.5■□□□□ 0.55
CPNE6-217ENST00000560828 PDXDC1Q6P996 788 aa18.5■□□□□ 0.55
CPNE6-217ENST00000560828 LILRA6Q6PI73 481 aa18.5■□□□□ 0.55
CPNE6-217ENST00000560828 TAS1R3Q7RTX0 852 aa18.5■□□□□ 0.55
CPNE6-217ENST00000560828 PALB2Q86YC2 1186 aa18.5■□□□□ 0.55
CPNE6-217ENST00000560828 FBXL6Q8N531 539 aa18.5■□□□□ 0.55
CPNE6-217ENST00000560828 HASPINQ8TF76 798 aa18.5■□□□□ 0.55
CPNE6-217ENST00000560828 SPIRE2Q8WWL2 714 aa18.5■□□□□ 0.55
CPNE6-217ENST00000560828 PIK3R5Q8WYR1 880 aa18.5■□□□□ 0.55
CPNE6-217ENST00000560828 UROC1Q96N76 676 aa18.5■□□□□ 0.55
CPNE6-217ENST00000560828 PPP1R10Q96QC0 940 aaKnown RBP18.5■□□□□ 0.55
CPNE6-217ENST00000560828 CCDC94Q9BW85 323 aaPredicted RBP18.5■□□□□ 0.55
CPNE6-217ENST00000560828 ZDHHC7Q9NXF8 308 aa18.5■□□□□ 0.55
CPNE6-217ENST00000560828 TMEM189-UBE2V1I3L0A0 370 aa18.49■□□□□ 0.55
CPNE6-217ENST00000560828 SLC16A4O15374 487 aa18.49■□□□□ 0.55
CPNE6-217ENST00000560828 BRD1O95696 1058 aa18.49■□□□□ 0.55
CPNE6-217ENST00000560828 PLA2G4BP0C869 781 aa18.49■□□□□ 0.55
CPNE6-217ENST00000560828 MCF2P10911 925 aa18.49■□□□□ 0.55
CPNE6-217ENST00000560828 PROZP22891 400 aa18.49■□□□□ 0.55
CPNE6-217ENST00000560828 SMTNP53814 917 aa18.49■□□□□ 0.55
CPNE6-217ENST00000560828 SLC12A3P55017 1021 aa18.49■□□□□ 0.55
CPNE6-217ENST00000560828 GLRA4Q5JXX5 417 aa18.49■□□□□ 0.55
CPNE6-217ENST00000560828 TARS2Q9BW92 718 aaKnown RBP18.49■□□□□ 0.55
CPNE6-217ENST00000560828 LIMD1Q9UGP4 676 aa18.49■□□□□ 0.55
CPNE6-217ENST00000560828 SFI1A8K8P3 1242 aa18.48■□□□□ 0.55
CPNE6-217ENST00000560828 ABLIM1O14639 778 aa18.48■□□□□ 0.55
CPNE6-217ENST00000560828 RFPL2O75678 378 aa18.48■□□□□ 0.55
CPNE6-217ENST00000560828 SPATA31D3P0C874 917 aa18.48■□□□□ 0.55
CPNE6-217ENST00000560828 RPL17P18621 184 aaKnown RBP18.48■□□□□ 0.55
CPNE6-217ENST00000560828 RAD51AP2Q09MP3 1159 aa18.48■□□□□ 0.55
CPNE6-217ENST00000560828 STRN3Q13033 797 aa18.48■□□□□ 0.55
CPNE6-217ENST00000560828 CUL4AQ13619 759 aa18.48■□□□□ 0.55
CPNE6-217ENST00000560828 XKR4Q5GH76 650 aa18.48■□□□□ 0.55
CPNE6-217ENST00000560828 DCLRE1AQ6PJP8 1040 aa18.48■□□□□ 0.55
CPNE6-217ENST00000560828 PRSS55Q6UWB4 352 aaPredicted RBP18.48■□□□□ 0.55
CPNE6-217ENST00000560828 MPZL3Q6UWV2 235 aa18.48■□□□□ 0.55
CPNE6-217ENST00000560828 ALKAL1Q6UXT8 129 aa18.48■□□□□ 0.55
CPNE6-217ENST00000560828 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.48■□□□□ 0.55
CPNE6-217ENST00000560828 SPATA31D4Q6ZUB0 917 aa18.48■□□□□ 0.55
CPNE6-217ENST00000560828 CEP57Q86XR8 500 aa18.48■□□□□ 0.55
CPNE6-217ENST00000560828 CEP120Q8N960 986 aa18.48■□□□□ 0.55
CPNE6-217ENST00000560828 TMEM161BQ8NDZ6 487 aa18.48■□□□□ 0.55
CPNE6-217ENST00000560828 LNX1Q8TBB1 728 aaPredicted RBP18.48■□□□□ 0.55
CPNE6-217ENST00000560828 STAMQ92783 540 aa18.48■□□□□ 0.55
CPNE6-217ENST00000560828 ZNF707Q96C28 371 aaPredicted RBP18.48■□□□□ 0.55
CPNE6-217ENST00000560828 PLIN2Q99541 437 aa18.48■□□□□ 0.55
CPNE6-217ENST00000560828 WDR6Q9NNW5 1121 aaKnown RBP18.48■□□□□ 0.55
CPNE6-217ENST00000560828 CLUHO75153 1309 aa18.48■□□□□ 0.55
CPNE6-217ENST00000560828 TDRD15B5MCY1 1934 aaKnown RBP18.47■□□□□ 0.55
CPNE6-217ENST00000560828 SMIM28A0A1B0GU29 152 aa18.47■□□□□ 0.55
CPNE6-217ENST00000560828 TOM1L1O75674 476 aa18.47■□□□□ 0.55
CPNE6-217ENST00000560828 B3GAT3O94766 335 aa18.47■□□□□ 0.55
CPNE6-217ENST00000560828 ASGR2P07307 311 aa18.47■□□□□ 0.55
CPNE6-217ENST00000560828 PDCP20941 246 aa18.47■□□□□ 0.55
CPNE6-217ENST00000560828 UBA7P41226 1012 aa18.47■□□□□ 0.55
CPNE6-217ENST00000560828 CLCNKBP51801 687 aa18.47■□□□□ 0.55
CPNE6-217ENST00000560828 NHLH1Q02575 133 aa18.47■□□□□ 0.55
CPNE6-217ENST00000560828 PSMD5Q16401 504 aa18.47■□□□□ 0.55
CPNE6-217ENST00000560828 UPP1Q16831 310 aa18.47■□□□□ 0.55
CPNE6-217ENST00000560828 GLYCTKQ8IVS8 523 aa18.47■□□□□ 0.55
CPNE6-217ENST00000560828 SMG7Q92540 1137 aaKnown RBP18.47■□□□□ 0.55
CPNE6-217ENST00000560828 CALML4Q96GE6 196 aa18.47■□□□□ 0.55
CPNE6-217ENST00000560828 CLSTN3Q9BQT9 956 aa18.47■□□□□ 0.55
CPNE6-217ENST00000560828 TCHPQ9BT92 498 aa18.47■□□□□ 0.55
CPNE6-217ENST00000560828 SLC38A7Q9NVC3 462 aa18.47■□□□□ 0.55
CPNE6-217ENST00000560828 LARSQ9P2J5 1176 aaKnown RBP18.47■□□□□ 0.55
CPNE6-217ENST00000560828 H0YCG3 227 aa18.46■□□□□ 0.55
CPNE6-217ENST00000560828 TRAPPC3O43617 180 aa18.46■□□□□ 0.55
CPNE6-217ENST00000560828 MAPTP10636 758 aaKnown RBP18.46■□□□□ 0.55
CPNE6-217ENST00000560828 FGFR3P22607 806 aa18.46■□□□□ 0.55
CPNE6-217ENST00000560828 LONP1P36776 959 aaKnown RBP18.46■□□□□ 0.55
CPNE6-217ENST00000560828 MRE11P49959 708 aa18.46■□□□□ 0.55
CPNE6-217ENST00000560828 OSTNP61366 133 aa18.46■□□□□ 0.55
CPNE6-217ENST00000560828 ZPBP2Q6X784 338 aa18.46■□□□□ 0.55
CPNE6-217ENST00000560828 SNX27Q96L92 541 aa18.46■□□□□ 0.55
CPNE6-217ENST00000560828 ACAP3Q96P50 834 aa18.46■□□□□ 0.55
CPNE6-217ENST00000560828 PRRX2Q99811 253 aa18.46■□□□□ 0.55
CPNE6-217ENST00000560828 FBXW11Q9UKB1 542 aa18.46■□□□□ 0.55
CPNE6-217ENST00000560828 ODF2LQ9ULJ1 636 aa18.46■□□□□ 0.55
CPNE6-217ENST00000560828 ZMYND10O75800 440 aa18.45■□□□□ 0.54
CPNE6-217ENST00000560828 MYBP10242 640 aa18.45■□□□□ 0.54
CPNE6-217ENST00000560828 KCNE1P15382 129 aa18.45■□□□□ 0.54
CPNE6-217ENST00000560828 SCP2P22307 547 aa18.45■□□□□ 0.54
CPNE6-217ENST00000560828 NOLC1Q14978 699 aaKnown RBP eCLIP18.45■□□□□ 0.54
CPNE6-217ENST00000560828 SF3A1Q15459 793 aaKnown RBP18.45■□□□□ 0.54
CPNE6-217ENST00000560828 ARSHQ5FYA8 562 aa18.45■□□□□ 0.54
CPNE6-217ENST00000560828 KCNN1Q92952 543 aa18.45■□□□□ 0.54
CPNE6-217ENST00000560828 DDX27Q96GQ7 796 aaKnown RBP18.45■□□□□ 0.54
CPNE6-217ENST00000560828 PRKD2Q9BZL6 878 aa18.45■□□□□ 0.54
CPNE6-217ENST00000560828 PIDD1Q9HB75 910 aa18.45■□□□□ 0.54
CPNE6-217ENST00000560828 GOLGA2P5Q9HBQ8 144 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms