RNA–Protein interactions for RNA: ENST00000560641.5

PBX1-219, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-219ENST00000560641 TTC25Q96NG3 672 aa17.11■□□□□ 0.33
PBX1-219ENST00000560641 PLEKHG4BQ96PX9 1271 aa17.11■□□□□ 0.33
PBX1-219ENST00000560641 TAS2R14Q9NYV8 317 aa17.11■□□□□ 0.33
PBX1-219ENST00000560641 APEX2Q9UBZ4 518 aa17.11■□□□□ 0.33
PBX1-219ENST00000560641 ZFP69BQ9UJL9 534 aa17.11■□□□□ 0.33
PBX1-219ENST00000560641 KIAA1024Q9UPX6 916 aa17.11■□□□□ 0.33
PBX1-219ENST00000560641 GSC2O15499 205 aa17.1■□□□□ 0.33
PBX1-219ENST00000560641 IL1BP01584 269 aa17.1■□□□□ 0.33
PBX1-219ENST00000560641 SETSIPP0DME0 302 aa17.1■□□□□ 0.33
PBX1-219ENST00000560641 GZMAP12544 262 aa17.1■□□□□ 0.33
PBX1-219ENST00000560641 FMO5P49326 533 aa17.1■□□□□ 0.33
PBX1-219ENST00000560641 PPP4CP60510 307 aa17.1■□□□□ 0.33
PBX1-219ENST00000560641 RPL26P61254 145 aaKnown RBP17.1■□□□□ 0.33
PBX1-219ENST00000560641 HNRNPDQ14103 355 aaKnown RBP17.1■□□□□ 0.33
PBX1-219ENST00000560641 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.1■□□□□ 0.33
PBX1-219ENST00000560641 PPFIBP2Q8ND30 876 aa17.1■□□□□ 0.33
PBX1-219ENST00000560641 MIPOL1Q8TD10 442 aa17.1■□□□□ 0.33
PBX1-219ENST00000560641 TMEM174Q8WUU8 243 aa17.1■□□□□ 0.33
PBX1-219ENST00000560641 OLFM3Q96PB7 478 aa17.1■□□□□ 0.33
PBX1-219ENST00000560641 MLXIPLQ9NP71 852 aa17.1■□□□□ 0.33
PBX1-219ENST00000560641 KRT82Q9NSB4 513 aa17.1■□□□□ 0.33
PBX1-219ENST00000560641 EIF4E1BA6NMX2 242 aaKnown RBP17.1■□□□□ 0.33
PBX1-219ENST00000560641 LYNP07948 512 aa17.1■□□□□ 0.33
PBX1-219ENST00000560641 ABCB4P21439 1286 aa17.1■□□□□ 0.33
PBX1-219ENST00000560641 CDK7P50613 346 aa17.1■□□□□ 0.33
PBX1-219ENST00000560641 MYBPC3Q14896 1274 aa17.1■□□□□ 0.33
PBX1-219ENST00000560641 WDR72Q3MJ13 1102 aa17.1■□□□□ 0.33
PBX1-219ENST00000560641 DCAF17Q5H9S7 520 aaPredicted RBP17.1■□□□□ 0.33
PBX1-219ENST00000560641 PPP1R14BQ96C90 147 aa17.1■□□□□ 0.33
PBX1-219ENST00000560641 ASCC2Q9H1I8 757 aaPredicted RBP17.1■□□□□ 0.33
PBX1-219ENST00000560641 ATF5Q9Y2D1 282 aaPredicted RBP17.1■□□□□ 0.33
PBX1-219ENST00000560641 NPHP3-ACAD11A0A0J9YXS1 232 aa17.09■□□□□ 0.33
PBX1-219ENST00000560641 TCRBV7S2A1N4TA0A589 114 aa17.09■□□□□ 0.33
PBX1-219ENST00000560641 BTBD19C9JJ37 291 aa17.09■□□□□ 0.33
PBX1-219ENST00000560641 MAP3K7O43318 606 aa17.09■□□□□ 0.33
PBX1-219ENST00000560641 THAP12O43422 761 aa17.09■□□□□ 0.33
PBX1-219ENST00000560641 TBX10O75333 385 aa17.09■□□□□ 0.33
PBX1-219ENST00000560641 CBX6O95503 412 aa17.09■□□□□ 0.33
PBX1-219ENST00000560641 SNHG28P0DPA3 235 aa17.09■□□□□ 0.33
PBX1-219ENST00000560641 CHRNB2P17787 502 aa17.09■□□□□ 0.33
PBX1-219ENST00000560641 GCAP28676 217 aa17.09■□□□□ 0.33
PBX1-219ENST00000560641 SF3B3Q15393 1217 aaKnown RBP17.09■□□□□ 0.33
PBX1-219ENST00000560641 ANKS1BQ7Z6G8 1248 aa17.09■□□□□ 0.33
PBX1-219ENST00000560641 NOP9Q86U38 636 aaKnown RBP17.09■□□□□ 0.33
PBX1-219ENST00000560641 SRRM1Q8IYB3 904 aaKnown RBP17.09■□□□□ 0.33
PBX1-219ENST00000560641 ZNF444Q8N0Y2 327 aaPredicted RBP17.09■□□□□ 0.33
PBX1-219ENST00000560641 ZDHHC7Q9NXF8 308 aa17.09■□□□□ 0.33
PBX1-219ENST00000560641 CYP1A2P05177 515 aa17.09■□□□□ 0.33
PBX1-219ENST00000560641 PABPC4LP0CB38 370 aaKnown RBP17.09■□□□□ 0.33
PBX1-219ENST00000560641 GOLGA8HP0CJ92 632 aa17.09■□□□□ 0.33
PBX1-219ENST00000560641 CRABP2P29373 138 aa17.09■□□□□ 0.33
PBX1-219ENST00000560641 PSMC2P35998 433 aaKnown RBP17.09■□□□□ 0.33
PBX1-219ENST00000560641 RFWD3Q6PCD5 774 aa17.09■□□□□ 0.33
PBX1-219ENST00000560641 NLRP9Q7RTR0 991 aa17.09■□□□□ 0.33
PBX1-219ENST00000560641 SH3RF3Q8TEJ3 882 aaPredicted RBP17.09■□□□□ 0.33
PBX1-219ENST00000560641 CCDC87Q9NVE4 849 aa17.09■□□□□ 0.33
PBX1-219ENST00000560641 FETUBQ9UGM5 382 aa17.09■□□□□ 0.33
PBX1-219ENST00000560641 NFASCO94856 1347 aa17.09■□□□□ 0.33
PBX1-219ENST00000560641 H0Y3Z8 333 aa17.09■□□□□ 0.33
PBX1-219ENST00000560641 TYROBPO43914 113 aa17.09■□□□□ 0.33
PBX1-219ENST00000560641 RANBP1P43487 201 aa17.09■□□□□ 0.33
PBX1-219ENST00000560641 MCCD1P59942 119 aaPredicted RBP17.09■□□□□ 0.33
PBX1-219ENST00000560641 KYNUQ16719 465 aa17.09■□□□□ 0.33
PBX1-219ENST00000560641 LIN52Q52LA3 116 aa17.09■□□□□ 0.33
PBX1-219ENST00000560641 DSTYKQ6XUX3 929 aa17.09■□□□□ 0.33
PBX1-219ENST00000560641 C16orf86Q6ZW13 317 aa17.09■□□□□ 0.33
PBX1-219ENST00000560641 CCDC25Q86WR0 208 aa17.09■□□□□ 0.33
PBX1-219ENST00000560641 ALDH16A1Q8IZ83 802 aa17.09■□□□□ 0.33
PBX1-219ENST00000560641 GRID1Q9ULK0 1009 aa17.09■□□□□ 0.33
PBX1-219ENST00000560641 RASA4BC9J798 803 aa17.08■□□□□ 0.33
PBX1-219ENST00000560641 RASA4O43374 803 aa17.08■□□□□ 0.33
PBX1-219ENST00000560641 ATP9BO43861 1147 aa17.08■□□□□ 0.33
PBX1-219ENST00000560641 CLCN2P51788 898 aa17.08■□□□□ 0.33
PBX1-219ENST00000560641 RBM5P52756 815 aaKnown RBP eCLIP17.08■□□□□ 0.33
PBX1-219ENST00000560641 DNAJC3Q13217 504 aa17.08■□□□□ 0.33
PBX1-219ENST00000560641 CCDC6Q16204 474 aa17.08■□□□□ 0.33
PBX1-219ENST00000560641 SPTY2D1Q68D10 685 aaPredicted RBP17.08■□□□□ 0.33
PBX1-219ENST00000560641 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.08■□□□□ 0.33
PBX1-219ENST00000560641 ADGRG6Q86SQ4 1221 aa17.08■□□□□ 0.33
PBX1-219ENST00000560641 CENPKQ9BS16 269 aa17.08■□□□□ 0.33
PBX1-219ENST00000560641 PLVAPQ9BX97 442 aa17.08■□□□□ 0.33
PBX1-219ENST00000560641 POTECB2RU33 542 aa17.08■□□□□ 0.32
PBX1-219ENST00000560641 MAGEC1O60732 1142 aa17.08■□□□□ 0.32
PBX1-219ENST00000560641 CYP1A1P04798 512 aaPredicted RBP17.08■□□□□ 0.32
PBX1-219ENST00000560641 CASP4P49662 377 aa17.08■□□□□ 0.32
PBX1-219ENST00000560641 ITGA8P53708 1063 aa17.08■□□□□ 0.32
PBX1-219ENST00000560641 CENPCQ03188 943 aa17.08■□□□□ 0.32
PBX1-219ENST00000560641 ASPRV1Q53RT3 343 aa17.08■□□□□ 0.32
PBX1-219ENST00000560641 FAM47EQ6ZV65 393 aa17.08■□□□□ 0.32
PBX1-219ENST00000560641 PALB2Q86YC2 1186 aa17.08■□□□□ 0.32
PBX1-219ENST00000560641 DYNLL2Q96FJ2 89 aa17.08■□□□□ 0.32
PBX1-219ENST00000560641 DMAC2Q9NW81 257 aa17.08■□□□□ 0.32
PBX1-219ENST00000560641 IRS2Q9Y4H2 1338 aa17.08■□□□□ 0.32
PBX1-219ENST00000560641 CAPN9O14815 690 aa17.08■□□□□ 0.32
PBX1-219ENST00000560641 TGFB1I1O43294 461 aa17.08■□□□□ 0.32
PBX1-219ENST00000560641 GAS8O95995 478 aa17.08■□□□□ 0.32
PBX1-219ENST00000560641 SERPINB4P48594 390 aa17.08■□□□□ 0.32
PBX1-219ENST00000560641 SPIRE1Q08AE8 756 aa17.08■□□□□ 0.32
PBX1-219ENST00000560641 GRM2Q14416 872 aa17.08■□□□□ 0.32
PBX1-219ENST00000560641 LMO3Q8TAP4 145 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms