RNA–Protein interactions for RNA: ENST00000560483.1

LRRC28-219, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-219ENST00000560483 PCDHA7Q9UN72 937 aa8.78□□□□□ -1
LRRC28-219ENST00000560483 RBM19Q9Y4C8 960 aaKnown RBP8.78□□□□□ -1
LRRC28-219ENST00000560483 RALGAPA2Q2PPJ7 1873 aa8.78□□□□□ -1
LRRC28-219ENST00000560483 CNTNAP2Q9UHC6 1331 aa8.78□□□□□ -1
LRRC28-219ENST00000560483 PRRC2BQ5JSZ5 2229 aaKnown RBP8.77□□□□□ -1.01
LRRC28-219ENST00000560483 CHD7Q9P2D1 2997 aa8.77□□□□□ -1.01
LRRC28-219ENST00000560483 MEIS3P2A8K0S8 358 aa8.77□□□□□ -1.01
LRRC28-219ENST00000560483 NT5C1B-RDH14C9J2C7 533 aa8.77□□□□□ -1.01
LRRC28-219ENST00000560483 H3BNC9 293 aa8.77□□□□□ -1.01
LRRC28-219ENST00000560483 HNRNPDLO14979 420 aaKnown RBP8.77□□□□□ -1.01
LRRC28-219ENST00000560483 TRAK2O60296 914 aa8.77□□□□□ -1.01
LRRC28-219ENST00000560483 RB1P06400 928 aa8.77□□□□□ -1.01
LRRC28-219ENST00000560483 OR1G1P47890 313 aa8.77□□□□□ -1.01
LRRC28-219ENST00000560483 LIG4P49917 911 aa8.77□□□□□ -1.01
LRRC28-219ENST00000560483 ASIC1P78348 528 aa8.77□□□□□ -1.01
LRRC28-219ENST00000560483 CSPP1Q1MSJ5 1256 aa8.77□□□□□ -1.01
LRRC28-219ENST00000560483 DCAF4L1Q3SXM0 396 aa8.77□□□□□ -1.01
LRRC28-219ENST00000560483 HERC4Q5GLZ8 1057 aaPredicted RBP8.77□□□□□ -1.01
LRRC28-219ENST00000560483 CLLU1OSQ5K130 101 aa8.77□□□□□ -1.01
LRRC28-219ENST00000560483 SYCP3Q8IZU3 236 aa8.77□□□□□ -1.01
LRRC28-219ENST00000560483 COLGALT1Q8NBJ5 622 aa8.77□□□□□ -1.01
LRRC28-219ENST00000560483 SLC17A8Q8NDX2 589 aa8.77□□□□□ -1.01
LRRC28-219ENST00000560483 TMEM169Q96HH4 297 aa8.77□□□□□ -1.01
LRRC28-219ENST00000560483 CHAMP1Q96JM3 812 aa8.77□□□□□ -1.01
LRRC28-219ENST00000560483 CASD1Q96PB1 797 aa8.77□□□□□ -1.01
LRRC28-219ENST00000560483 GAD1Q99259 594 aa8.77□□□□□ -1.01
LRRC28-219ENST00000560483 PYM1Q9BRP8 204 aaKnown RBP8.77□□□□□ -1.01
LRRC28-219ENST00000560483 TARS2Q9BW92 718 aaKnown RBP8.77□□□□□ -1.01
LRRC28-219ENST00000560483 PLVAPQ9BX97 442 aa8.77□□□□□ -1.01
LRRC28-219ENST00000560483 SCAND2PQ9GZW5 306 aaPredicted RBP8.77□□□□□ -1.01
LRRC28-219ENST00000560483 PDZD7Q9H5P4 517 aa8.77□□□□□ -1.01
LRRC28-219ENST00000560483 GDPD2Q9HCC8 539 aa8.77□□□□□ -1.01
LRRC28-219ENST00000560483 BLOC1S4Q9NUP1 217 aa8.77□□□□□ -1.01
LRRC28-219ENST00000560483 RNF19AQ9NV58 838 aa8.77□□□□□ -1.01
LRRC28-219ENST00000560483 SNTG2Q9NY99 539 aa8.77□□□□□ -1.01
LRRC28-219ENST00000560483 KANSL3Q9P2N6 904 aa8.77□□□□□ -1.01
LRRC28-219ENST00000560483 COL4A4P53420 1690 aaPredicted RBP8.77□□□□□ -1.01
LRRC28-219ENST00000560483 KIAA1671Q9BY89 1806 aa8.77□□□□□ -1.01
LRRC28-219ENST00000560483 COL6A3P12111 3177 aa8.77□□□□□ -1.01
LRRC28-219ENST00000560483 TDRD15B5MCY1 1934 aaKnown RBP8.76□□□□□ -1.01
LRRC28-219ENST00000560483 EYSQ5T1H1 3165 aa8.76□□□□□ -1.01
LRRC28-219ENST00000560483 A0A1B0GUA9 196 aa8.76□□□□□ -1.01
LRRC28-219ENST00000560483 A0A1B0GVL5 298 aa8.76□□□□□ -1.01
LRRC28-219ENST00000560483 ARL5CA6NH57 179 aa8.76□□□□□ -1.01
LRRC28-219ENST00000560483 GRM6O15303 877 aa8.76□□□□□ -1.01
LRRC28-219ENST00000560483 FGF18O76093 207 aa8.76□□□□□ -1.01
LRRC28-219ENST00000560483 GCNT3O95395 438 aa8.76□□□□□ -1.01
LRRC28-219ENST00000560483 TIMP2P16035 220 aa8.76□□□□□ -1.01
LRRC28-219ENST00000560483 ATF7P17544 494 aaPredicted RBP8.76□□□□□ -1.01
LRRC28-219ENST00000560483 NMT1P30419 496 aaKnown RBP8.76□□□□□ -1.01
LRRC28-219ENST00000560483 PPM1AP35813 382 aa8.76□□□□□ -1.01
LRRC28-219ENST00000560483 AFMP43652 599 aa8.76□□□□□ -1.01
LRRC28-219ENST00000560483 SCNN1GP51170 649 aa8.76□□□□□ -1.01
LRRC28-219ENST00000560483 GIT2Q14161 759 aa8.76□□□□□ -1.01
LRRC28-219ENST00000560483 FAM187BQ17R55 369 aa8.76□□□□□ -1.01
LRRC28-219ENST00000560483 TIGD5Q53EQ6 642 aa8.76□□□□□ -1.01
LRRC28-219ENST00000560483 ARSHQ5FYA8 562 aa8.76□□□□□ -1.01
LRRC28-219ENST00000560483 UBXN11Q5T124 520 aa8.76□□□□□ -1.01
LRRC28-219ENST00000560483 PLPP4Q5VZY2 271 aa8.76□□□□□ -1.01
LRRC28-219ENST00000560483 SHC4Q6S5L8 630 aa8.76□□□□□ -1.01
LRRC28-219ENST00000560483 KCNT2Q6UVM3 1135 aa8.76□□□□□ -1.01
LRRC28-219ENST00000560483 HAUS6Q7Z4H7 955 aa8.76□□□□□ -1.01
LRRC28-219ENST00000560483 RETREG3Q86VR2 466 aa8.76□□□□□ -1.01
LRRC28-219ENST00000560483 SFR1Q86XK3 245 aa8.76□□□□□ -1.01
LRRC28-219ENST00000560483 NPAS3Q8IXF0 933 aa8.76□□□□□ -1.01
LRRC28-219ENST00000560483 CCDC65Q8IXS2 484 aa8.76□□□□□ -1.01
LRRC28-219ENST00000560483 DAW1Q8N136 415 aa8.76□□□□□ -1.01
LRRC28-219ENST00000560483 SMG8Q8ND04 991 aaKnown RBP8.76□□□□□ -1.01
LRRC28-219ENST00000560483 LEO1Q8WVC0 666 aaPredicted RBP8.76□□□□□ -1.01
LRRC28-219ENST00000560483 POF1BQ8WVV4 589 aa8.76□□□□□ -1.01
LRRC28-219ENST00000560483 BAP1Q92560 729 aa8.76□□□□□ -1.01
LRRC28-219ENST00000560483 CCDC94Q9BW85 323 aaPredicted RBP8.76□□□□□ -1.01
LRRC28-219ENST00000560483 FZD8Q9H461 694 aa8.76□□□□□ -1.01
LRRC28-219ENST00000560483 PANK4Q9NVE7 773 aa8.76□□□□□ -1.01
LRRC28-219ENST00000560483 TBC1D13Q9NVG8 400 aa8.76□□□□□ -1.01
LRRC28-219ENST00000560483 SPG21Q9NZD8 308 aa8.76□□□□□ -1.01
LRRC28-219ENST00000560483 KCNH3Q9ULD8 1083 aa8.76□□□□□ -1.01
LRRC28-219ENST00000560483 FAN1Q9Y2M0 1017 aa8.76□□□□□ -1.01
LRRC28-219ENST00000560483 PRG3Q9Y2Y8 225 aaPredicted RBP8.76□□□□□ -1.01
LRRC28-219ENST00000560483 ZDHHC9Q9Y397 364 aa8.76□□□□□ -1.01
LRRC28-219ENST00000560483 MTCH2Q9Y6C9 303 aa8.76□□□□□ -1.01
LRRC28-219ENST00000560483 CHD9Q3L8U1 2897 aa8.75□□□□□ -1.01
LRRC28-219ENST00000560483 MYO7AQ13402 2215 aa8.75□□□□□ -1.01
LRRC28-219ENST00000560483 FAM181BA6NEQ2 426 aa8.75□□□□□ -1.01
LRRC28-219ENST00000560483 MYMKA6NI61 221 aa8.75□□□□□ -1.01
LRRC28-219ENST00000560483 CLDN3O15551 220 aa8.75□□□□□ -1.01
LRRC28-219ENST00000560483 ZNF623O75123 536 aa8.75□□□□□ -1.01
LRRC28-219ENST00000560483 OFD1O75665 1012 aa8.75□□□□□ -1.01
LRRC28-219ENST00000560483 RECQL4O94761 1208 aa8.75□□□□□ -1.01
LRRC28-219ENST00000560483 ALDH2P05091 517 aa8.75□□□□□ -1.01
LRRC28-219ENST00000560483 ITGB1P05556 798 aa8.75□□□□□ -1.01
LRRC28-219ENST00000560483 GAP43P17677 238 aa8.75□□□□□ -1.01
LRRC28-219ENST00000560483 ABCD1P33897 745 aa8.75□□□□□ -1.01
LRRC28-219ENST00000560483 BCAR1P56945 870 aa8.75□□□□□ -1.01
LRRC28-219ENST00000560483 MAPK7Q13164 816 aa8.75□□□□□ -1.01
LRRC28-219ENST00000560483 NNTQ13423 1086 aa8.75□□□□□ -1.01
LRRC28-219ENST00000560483 SUZ12Q15022 739 aaKnown RBP8.75□□□□□ -1.01
LRRC28-219ENST00000560483 AMHR2Q16671 573 aa8.75□□□□□ -1.01
LRRC28-219ENST00000560483 NAALADL2Q58DX5 795 aa8.75□□□□□ -1.01
LRRC28-219ENST00000560483 NT5DC1Q5TFE4 455 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms