RNA–Protein interactions for RNA: ENST00000560379.1

USP8-210, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-210ENST00000560379 PPARGC1AQ9UBK2 798 aaKnown RBP7□□□□□ -1.29
USP8-210ENST00000560379 HDAC5Q9UQL6 1122 aa7□□□□□ -1.29
USP8-210ENST00000560379 ZBTB1Q9Y2K1 713 aa7□□□□□ -1.29
USP8-210ENST00000560379 PCDHA2Q9Y5H9 948 aa7□□□□□ -1.29
USP8-210ENST00000560379 SPO11Q9Y5K1 396 aa7□□□□□ -1.29
USP8-210ENST00000560379 SNX11Q9Y5W9 270 aa7□□□□□ -1.29
USP8-210ENST00000560379 ZNF521Q96K83 1311 aa7□□□□□ -1.29
USP8-210ENST00000560379 USP42Q9H9J4 1324 aaKnown RBP7□□□□□ -1.29
USP8-210ENST00000560379 ZNF865P0CJ78 1059 aaPredicted RBP6.99□□□□□ -1.29
USP8-210ENST00000560379 NOP2P46087 812 aaKnown RBP6.99□□□□□ -1.29
USP8-210ENST00000560379 PDCD1Q15116 288 aa6.99□□□□□ -1.29
USP8-210ENST00000560379 TTLL7Q6ZT98 887 aa6.99□□□□□ -1.29
USP8-210ENST00000560379 ARHGAP27Q6ZUM4 889 aa6.99□□□□□ -1.29
USP8-210ENST00000560379 UBE2Q1Q7Z7E8 422 aa6.99□□□□□ -1.29
USP8-210ENST00000560379 EGFL6Q8IUX8 553 aa6.99□□□□□ -1.29
USP8-210ENST00000560379 MIER2Q8N344 545 aa6.99□□□□□ -1.29
USP8-210ENST00000560379 ZNF610Q8N9Z0 462 aa6.99□□□□□ -1.29
USP8-210ENST00000560379 FAM156AQ8NDB6 213 aa6.99□□□□□ -1.29
USP8-210ENST00000560379 DIS3LQ8TF46 1054 aaKnown RBP6.99□□□□□ -1.29
USP8-210ENST00000560379 TGFBRAP1Q8WUH2 860 aa6.99□□□□□ -1.29
USP8-210ENST00000560379 POF1BQ8WVV4 589 aa6.99□□□□□ -1.29
USP8-210ENST00000560379 TMEM169Q96HH4 297 aa6.99□□□□□ -1.29
USP8-210ENST00000560379 ELF4Q99607 663 aaPredicted RBP6.99□□□□□ -1.29
USP8-210ENST00000560379 BOCQ9BWV1 1114 aa6.99□□□□□ -1.29
USP8-210ENST00000560379 GTPBP4Q9BZE4 634 aaKnown RBP6.99□□□□□ -1.29
USP8-210ENST00000560379 ZDHHC5Q9C0B5 715 aa6.99□□□□□ -1.29
USP8-210ENST00000560379 ASCC2Q9H1I8 757 aaPredicted RBP6.99□□□□□ -1.29
USP8-210ENST00000560379 RASSF1Q9NS23 344 aa6.99□□□□□ -1.29
USP8-210ENST00000560379 TOMM22Q9NS69 142 aa6.99□□□□□ -1.29
USP8-210ENST00000560379 TMCC3Q9ULS5 477 aa6.99□□□□□ -1.29
USP8-210ENST00000560379 PCDHA11Q9Y5I1 949 aa6.99□□□□□ -1.29
USP8-210ENST00000560379 DLEC1Q9Y238 1755 aa6.99□□□□□ -1.29
USP8-210ENST00000560379 ARFGEF2Q9Y6D5 1785 aa6.99□□□□□ -1.29
USP8-210ENST00000560379 NUP98P52948 1817 aa6.99□□□□□ -1.29
USP8-210ENST00000560379 PITPNM2Q9BZ72 1349 aa6.99□□□□□ -1.29
USP8-210ENST00000560379 N4BP2Q86UW6 1770 aaPredicted RBP6.98□□□□□ -1.29
USP8-210ENST00000560379 J3KRW8 73 aa6.98□□□□□ -1.29
USP8-210ENST00000560379 KCNQ3O43525 872 aa6.98□□□□□ -1.29
USP8-210ENST00000560379 PQBP1O60828 265 aaKnown RBP6.98□□□□□ -1.29
USP8-210ENST00000560379 HRGP04196 525 aa6.98□□□□□ -1.29
USP8-210ENST00000560379 ZBTB48P10074 688 aaPredicted RBP6.98□□□□□ -1.29
USP8-210ENST00000560379 CYP7A1P22680 504 aa6.98□□□□□ -1.29
USP8-210ENST00000560379 OAS2P29728 719 aaKnown RBP6.98□□□□□ -1.29
USP8-210ENST00000560379 GRK3P35626 688 aa6.98□□□□□ -1.29
USP8-210ENST00000560379 LACTBP83111 547 aaPredicted RBP6.98□□□□□ -1.29
USP8-210ENST00000560379 ZP2Q05996 745 aa6.98□□□□□ -1.29
USP8-210ENST00000560379 IKZF1Q13422 519 aa6.98□□□□□ -1.29
USP8-210ENST00000560379 ZNF174Q15697 407 aa6.98□□□□□ -1.29
USP8-210ENST00000560379 KCNMB1Q16558 191 aa6.98□□□□□ -1.29
USP8-210ENST00000560379 KRTAP19-4Q3LI73 84 aa6.98□□□□□ -1.29
USP8-210ENST00000560379 KIAA1614Q5VZ46 1190 aa6.98□□□□□ -1.29
USP8-210ENST00000560379 LILRA6Q6PI73 481 aa6.98□□□□□ -1.29
USP8-210ENST00000560379 CCDC149Q6ZUS6 474 aa6.98□□□□□ -1.29
USP8-210ENST00000560379 RSRC2Q7L4I2 434 aaKnown RBP6.98□□□□□ -1.29
USP8-210ENST00000560379 COL23A1Q86Y22 540 aaPredicted RBP6.98□□□□□ -1.29
USP8-210ENST00000560379 ANKRD13BQ86YJ7 626 aa6.98□□□□□ -1.29
USP8-210ENST00000560379 GRAMD1CQ8IYS0 662 aa6.98□□□□□ -1.29
USP8-210ENST00000560379 DTWD2Q8NBA8 298 aa6.98□□□□□ -1.29
USP8-210ENST00000560379 HPS3Q969F9 1004 aa6.98□□□□□ -1.29
USP8-210ENST00000560379 OSBPL5Q9H0X9 879 aaPredicted RBP6.98□□□□□ -1.29
USP8-210ENST00000560379 C19orf73Q9NVV2 129 aa6.98□□□□□ -1.29
USP8-210ENST00000560379 AFDNP55196 1824 aaKnown RBP6.98□□□□□ -1.29
USP8-210ENST00000560379 C10orf71Q711Q0 1435 aa6.98□□□□□ -1.29
USP8-210ENST00000560379 ATP10DQ9P241 1426 aa6.98□□□□□ -1.29
USP8-210ENST00000560379 KIAA1551Q9HCM1 1747 aa6.98□□□□□ -1.29
USP8-210ENST00000560379 FANCIQ9NVI1 1328 aa6.98□□□□□ -1.29
USP8-210ENST00000560379 LAMB2P55268 1798 aa6.97□□□□□ -1.29
USP8-210ENST00000560379 IBTKQ9P2D0 1353 aaPredicted RBP6.97□□□□□ -1.29
USP8-210ENST00000560379 SLC12A8A0AV02 714 aa6.97□□□□□ -1.29
USP8-210ENST00000560379 LCHNA4D1U4 455 aa6.97□□□□□ -1.29
USP8-210ENST00000560379 K7ENM7 598 aa6.97□□□□□ -1.29
USP8-210ENST00000560379 IGF2BP3O00425 579 aaKnown RBP eCLIP6.97□□□□□ -1.29
USP8-210ENST00000560379 DVL2O14641 736 aa6.97□□□□□ -1.29
USP8-210ENST00000560379 BAIAP3O94812 1187 aa6.97□□□□□ -1.29
USP8-210ENST00000560379 TSPAN15O95858 294 aa6.97□□□□□ -1.29
USP8-210ENST00000560379 EOMESO95936 686 aa6.97□□□□□ -1.29
USP8-210ENST00000560379 POU2F2P09086 479 aa6.97□□□□□ -1.29
USP8-210ENST00000560379 PDE6AP16499 860 aa6.97□□□□□ -1.29
USP8-210ENST00000560379 RFC4P35249 363 aa6.97□□□□□ -1.29
USP8-210ENST00000560379 BRCA1P38398 1863 aaKnown RBP6.97□□□□□ -1.29
USP8-210ENST00000560379 TM4SF4P48230 202 aa6.97□□□□□ -1.29
USP8-210ENST00000560379 KIF22Q14807 665 aa6.97□□□□□ -1.29
USP8-210ENST00000560379 INF2Q27J81 1249 aa6.97□□□□□ -1.29
USP8-210ENST00000560379 RCSD1Q6JBY9 416 aa6.97□□□□□ -1.29
USP8-210ENST00000560379 OVCH2Q7RTZ1 564 aa6.97□□□□□ -1.29
USP8-210ENST00000560379 LCA5Q86VQ0 697 aa6.97□□□□□ -1.29
USP8-210ENST00000560379 AMIGO3Q86WK7 504 aa6.97□□□□□ -1.29
USP8-210ENST00000560379 SNX32Q86XE0 403 aa6.97□□□□□ -1.29
USP8-210ENST00000560379 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.97□□□□□ -1.29
USP8-210ENST00000560379 Q96M66 194 aa6.97□□□□□ -1.29
USP8-210ENST00000560379 CCDC138Q96M89 665 aa6.97□□□□□ -1.29
USP8-210ENST00000560379 MAP3K14Q99558 947 aa6.97□□□□□ -1.29
USP8-210ENST00000560379 SLC12A9Q9BXP2 914 aa6.97□□□□□ -1.29
USP8-210ENST00000560379 SMOC1Q9H4F8 434 aa6.97□□□□□ -1.29
USP8-210ENST00000560379 RSAD1Q9HA92 442 aa6.97□□□□□ -1.29
USP8-210ENST00000560379 DNAJC28Q9NX36 388 aa6.97□□□□□ -1.29
USP8-210ENST00000560379 KCNH3Q9ULD8 1083 aa6.97□□□□□ -1.29
USP8-210ENST00000560379 PCDHGB6Q9Y5F9 930 aa6.97□□□□□ -1.29
USP8-210ENST00000560379 CARMIL3Q8ND23 1372 aa6.96□□□□□ -1.29
USP8-210ENST00000560379 RIC1Q4ADV7 1423 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms