RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 TMEM132AQ24JP5 1023 aa14.47□□□□□ -0.09
SMAD3-213ENST00000560175 ZNF568Q3ZCX4 644 aa14.47□□□□□ -0.09
SMAD3-213ENST00000560175 ANKRD54Q6NXT1 300 aa14.47□□□□□ -0.09
SMAD3-213ENST00000560175 CNNM4Q6P4Q7 775 aa14.47□□□□□ -0.09
SMAD3-213ENST00000560175 CD300LGQ6UXG3 332 aa14.47□□□□□ -0.09
SMAD3-213ENST00000560175 RASSF8Q8NHQ8 419 aa14.47□□□□□ -0.09
SMAD3-213ENST00000560175 KCNG4Q8TDN1 519 aa14.47□□□□□ -0.09
SMAD3-213ENST00000560175 AUTS2Q8WXX7 1259 aa14.47□□□□□ -0.09
SMAD3-213ENST00000560175 ACAP3Q96P50 834 aa14.47□□□□□ -0.09
SMAD3-213ENST00000560175 KLHL5Q96PQ7 755 aa14.47□□□□□ -0.09
SMAD3-213ENST00000560175 CCDC94Q9BW85 323 aaPredicted RBP14.47□□□□□ -0.09
SMAD3-213ENST00000560175 GPR62Q9BZJ7 368 aa14.47□□□□□ -0.09
SMAD3-213ENST00000560175 CD320Q9NPF0 282 aa14.47□□□□□ -0.09
SMAD3-213ENST00000560175 CNTN3Q9P232 1028 aa14.47□□□□□ -0.09
SMAD3-213ENST00000560175 ADAM28Q9UKQ2 775 aa14.47□□□□□ -0.09
SMAD3-213ENST00000560175 CFAP45Q9UL16 551 aa14.47□□□□□ -0.09
SMAD3-213ENST00000560175 BARX2Q9UMQ3 279 aaPredicted RBP14.47□□□□□ -0.09
SMAD3-213ENST00000560175 SSX2IPQ9Y2D8 614 aa14.47□□□□□ -0.09
SMAD3-213ENST00000560175 PRG3Q9Y2Y8 225 aaPredicted RBP14.47□□□□□ -0.09
SMAD3-213ENST00000560175 STYXL1Q9Y6J8 313 aa14.47□□□□□ -0.09
SMAD3-213ENST00000560175 VWA8A3KMH1 1905 aa14.47□□□□□ -0.09
SMAD3-213ENST00000560175 CLDN3O15551 220 aa14.46□□□□□ -0.09
SMAD3-213ENST00000560175 CNPP09543 421 aaKnown RBP14.46□□□□□ -0.09
SMAD3-213ENST00000560175 NOLC1Q14978 699 aaKnown RBP eCLIP14.46□□□□□ -0.09
SMAD3-213ENST00000560175 SLC10A6Q3KNW5 377 aa14.46□□□□□ -0.09
SMAD3-213ENST00000560175 FUT10Q6P4F1 479 aa14.46□□□□□ -0.09
SMAD3-213ENST00000560175 SLC39A4Q6P5W5 647 aa14.46□□□□□ -0.09
SMAD3-213ENST00000560175 EP400NLQ6ZTU2 488 aa14.46□□□□□ -0.09
SMAD3-213ENST00000560175 PPFIBP1Q86W92 1011 aa14.46□□□□□ -0.09
SMAD3-213ENST00000560175 MAP4K3Q8IVH8 894 aa14.46□□□□□ -0.09
SMAD3-213ENST00000560175 SPRYD3Q8NCJ5 442 aa14.46□□□□□ -0.09
SMAD3-213ENST00000560175 CASP10Q92851 521 aa14.46□□□□□ -0.09
SMAD3-213ENST00000560175 SNX27Q96L92 541 aa14.46□□□□□ -0.09
SMAD3-213ENST00000560175 ZMAT2Q96NC0 199 aaKnown RBP14.46□□□□□ -0.09
SMAD3-213ENST00000560175 TCHPQ9BT92 498 aa14.46□□□□□ -0.09
SMAD3-213ENST00000560175 CUEDC2Q9H467 287 aa14.46□□□□□ -0.09
SMAD3-213ENST00000560175 OLFML3Q9NRN5 406 aa14.46□□□□□ -0.09
SMAD3-213ENST00000560175 MRPL17Q9NRX2 175 aaKnown RBP14.46□□□□□ -0.09
SMAD3-213ENST00000560175 TOPORSQ9NS56 1045 aaPredicted RBP14.46□□□□□ -0.09
SMAD3-213ENST00000560175 PCDHA7Q9UN72 937 aa14.46□□□□□ -0.09
SMAD3-213ENST00000560175 A0A0B4J269 797 aa14.45□□□□□ -0.1
SMAD3-213ENST00000560175 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.45□□□□□ -0.1
SMAD3-213ENST00000560175 TTC26A0AVF1 554 aa14.45□□□□□ -0.1
SMAD3-213ENST00000560175 KRT18P05783 430 aaKnown RBP14.45□□□□□ -0.1
SMAD3-213ENST00000560175 GAP43P17677 238 aa14.45□□□□□ -0.1
SMAD3-213ENST00000560175 NMT1P30419 496 aaKnown RBP14.45□□□□□ -0.1
SMAD3-213ENST00000560175 STAT6P42226 847 aa14.45□□□□□ -0.1
SMAD3-213ENST00000560175 CLCN4P51793 760 aa14.45□□□□□ -0.1
SMAD3-213ENST00000560175 YARSP54577 528 aaKnown RBP14.45□□□□□ -0.1
SMAD3-213ENST00000560175 POU5F1Q01860 360 aaKnown RBP14.45□□□□□ -0.1
SMAD3-213ENST00000560175 DNM1Q05193 864 aaKnown RBP14.45□□□□□ -0.1
SMAD3-213ENST00000560175 ZP2Q05996 745 aa14.45□□□□□ -0.1
SMAD3-213ENST00000560175 ZBTB6Q15916 424 aa14.45□□□□□ -0.1
SMAD3-213ENST00000560175 KYAT1Q16773 422 aa14.45□□□□□ -0.1
SMAD3-213ENST00000560175 UPP1Q16831 310 aa14.45□□□□□ -0.1
SMAD3-213ENST00000560175 USP41Q3LFD5 358 aa14.45□□□□□ -0.1
SMAD3-213ENST00000560175 FOXD4L5Q5VV16 416 aaPredicted RBP14.45□□□□□ -0.1
SMAD3-213ENST00000560175 DCLRE1AQ6PJP8 1040 aa14.45□□□□□ -0.1
SMAD3-213ENST00000560175 DYMQ7RTS9 669 aa14.45□□□□□ -0.1
SMAD3-213ENST00000560175 ZBTB33Q86T24 672 aa14.45□□□□□ -0.1
SMAD3-213ENST00000560175 ADHFE1Q8IWW8 467 aa14.45□□□□□ -0.1
SMAD3-213ENST00000560175 FOXD4L4Q8WXT5 416 aaPredicted RBP14.45□□□□□ -0.1
SMAD3-213ENST00000560175 HVCN1Q96D96 273 aa14.45□□□□□ -0.1
SMAD3-213ENST00000560175 UROC1Q96N76 676 aa14.45□□□□□ -0.1
SMAD3-213ENST00000560175 PANK2Q9BZ23 570 aa14.45□□□□□ -0.1
SMAD3-213ENST00000560175 TNMDQ9H2S6 317 aa14.45□□□□□ -0.1
SMAD3-213ENST00000560175 PLEKHA5Q9HAU0 1116 aa14.45□□□□□ -0.1
SMAD3-213ENST00000560175 FNIP2Q9P278 1114 aa14.45□□□□□ -0.1
SMAD3-213ENST00000560175 ANK1P16157 1881 aa14.44□□□□□ -0.1
SMAD3-213ENST00000560175 PLXNA3P51805 1871 aa14.44□□□□□ -0.1
SMAD3-213ENST00000560175 K7ENM7 598 aa14.44□□□□□ -0.1
SMAD3-213ENST00000560175 TBCAO75347 108 aaKnown RBP14.44□□□□□ -0.1
SMAD3-213ENST00000560175 TADA2AO75478 443 aa14.44□□□□□ -0.1
SMAD3-213ENST00000560175 CLTAP09496 248 aa14.44□□□□□ -0.1
SMAD3-213ENST00000560175 SRGAP2BP0DMP2 458 aa14.44□□□□□ -0.1
SMAD3-213ENST00000560175 IGFBP6P24592 240 aaPredicted RBP14.44□□□□□ -0.1
SMAD3-213ENST00000560175 GLUD2P49448 558 aa14.44□□□□□ -0.1
SMAD3-213ENST00000560175 SOX4Q06945 474 aaPredicted RBP14.44□□□□□ -0.1
SMAD3-213ENST00000560175 ZC2HC1CQ53FD0 456 aaPredicted RBP14.44□□□□□ -0.1
SMAD3-213ENST00000560175 RESP18Q5W5W9 173 aa14.44□□□□□ -0.1
SMAD3-213ENST00000560175 SFR1Q86XK3 245 aa14.44□□□□□ -0.1
SMAD3-213ENST00000560175 GJD3Q8N144 294 aa14.44□□□□□ -0.1
SMAD3-213ENST00000560175 DDX27Q96GQ7 796 aaKnown RBP14.44□□□□□ -0.1
SMAD3-213ENST00000560175 TSPAN18Q96SJ8 248 aa14.44□□□□□ -0.1
SMAD3-213ENST00000560175 EMILIN2Q9BXX0 1053 aa14.44□□□□□ -0.1
SMAD3-213ENST00000560175 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.44□□□□□ -0.1
SMAD3-213ENST00000560175 CACNG4Q9UBN1 327 aa14.44□□□□□ -0.1
SMAD3-213ENST00000560175 USP15Q9Y4E8 981 aaPredicted RBP14.44□□□□□ -0.1
SMAD3-213ENST00000560175 CASTOR2A6NHX0 329 aa14.43□□□□□ -0.1
SMAD3-213ENST00000560175 ANKRD63C9JTQ0 380 aa14.43□□□□□ -0.1
SMAD3-213ENST00000560175 OGTO15294 1046 aa14.43□□□□□ -0.1
SMAD3-213ENST00000560175 TEX28O15482 410 aa14.43□□□□□ -0.1
SMAD3-213ENST00000560175 KIF4AO95239 1232 aa14.43□□□□□ -0.1
SMAD3-213ENST00000560175 URODP06132 367 aa14.43□□□□□ -0.1
SMAD3-213ENST00000560175 RPL9P32969 192 aaKnown RBP14.43□□□□□ -0.1
SMAD3-213ENST00000560175 LIG4P49917 911 aa14.43□□□□□ -0.1
SMAD3-213ENST00000560175 CLCNKBP51801 687 aa14.43□□□□□ -0.1
SMAD3-213ENST00000560175 OSTNP61366 133 aa14.43□□□□□ -0.1
SMAD3-213ENST00000560175 ITIH3Q06033 890 aa14.43□□□□□ -0.1
SMAD3-213ENST00000560175 ELAVL2Q12926 359 aaKnown RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms