RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 ATP11BQ9Y2G3 1177 aa5.08□□□□□ -1.6
SPG11-218ENST00000559754 FPGT-TNNI3KV9GXZ4 949 aa5.08□□□□□ -1.6
SPG11-218ENST00000559754 GRID2IPA4D2P6 1211 aa5.07□□□□□ -1.6
SPG11-218ENST00000559754 DRGXA6NNA5 263 aa5.07□□□□□ -1.6
SPG11-218ENST00000559754 FAM171A2A8MVW0 826 aa5.07□□□□□ -1.6
SPG11-218ENST00000559754 TEX33O43247 280 aa5.07□□□□□ -1.6
SPG11-218ENST00000559754 PRKD3O94806 890 aa5.07□□□□□ -1.6
SPG11-218ENST00000559754 ALOX15P16050 662 aaPredicted RBP5.07□□□□□ -1.6
SPG11-218ENST00000559754 DDX6P26196 483 aaKnown RBP eCLIP5.07□□□□□ -1.6
SPG11-218ENST00000559754 MCAMP43121 646 aa5.07□□□□□ -1.6
SPG11-218ENST00000559754 GPR3P46089 330 aa5.07□□□□□ -1.6
SPG11-218ENST00000559754 PTTG1IPP53801 180 aa5.07□□□□□ -1.6
SPG11-218ENST00000559754 NANOS3P60323 173 aaKnown RBP5.07□□□□□ -1.6
SPG11-218ENST00000559754 BLOC1S1P78537 153 aa5.07□□□□□ -1.6
SPG11-218ENST00000559754 SRSF2Q01130 221 aaKnown RBP5.07□□□□□ -1.6
SPG11-218ENST00000559754 GUCY1B3Q02153 619 aa5.07□□□□□ -1.6
SPG11-218ENST00000559754 FAM102AQ5T9C2 384 aaPredicted RBP5.07□□□□□ -1.6
SPG11-218ENST00000559754 HECTD2Q5U5R9 776 aa5.07□□□□□ -1.6
SPG11-218ENST00000559754 RHOT2Q8IXI1 618 aa5.07□□□□□ -1.6
SPG11-218ENST00000559754 PQLC1Q8N2U9 271 aa5.07□□□□□ -1.6
SPG11-218ENST00000559754 SUPT20HQ8NEM7 779 aa5.07□□□□□ -1.6
SPG11-218ENST00000559754 SLC35B2Q8TB61 432 aa5.07□□□□□ -1.6
SPG11-218ENST00000559754 CASKIN2Q8WXE0 1202 aa5.07□□□□□ -1.6
SPG11-218ENST00000559754 CYFIP2Q96F07 1278 aa5.07□□□□□ -1.6
SPG11-218ENST00000559754 CCM2LQ9NUG4 571 aaPredicted RBP5.07□□□□□ -1.6
SPG11-218ENST00000559754 TMEM140Q9NV12 185 aa5.07□□□□□ -1.6
SPG11-218ENST00000559754 ANKFY1Q9P2R3 1169 aa5.07□□□□□ -1.6
SPG11-218ENST00000559754 MCM8Q9UJA3 840 aa5.07□□□□□ -1.6
SPG11-218ENST00000559754 USP15Q9Y4E8 981 aaPredicted RBP5.07□□□□□ -1.6
SPG11-218ENST00000559754 ANKRD62A6NC57 917 aa5.06□□□□□ -1.6
SPG11-218ENST00000559754 K7ESF4 209 aa5.06□□□□□ -1.6
SPG11-218ENST00000559754 ZNF185O15231 689 aa5.06□□□□□ -1.6
SPG11-218ENST00000559754 LPXNO60711 386 aa5.06□□□□□ -1.6
SPG11-218ENST00000559754 POMCP01189 267 aa5.06□□□□□ -1.6
SPG11-218ENST00000559754 RAP2AP10114 183 aa5.06□□□□□ -1.6
SPG11-218ENST00000559754 GSPT1P15170 499 aaKnown RBP5.06□□□□□ -1.6
SPG11-218ENST00000559754 ATP5JP18859 108 aa5.06□□□□□ -1.6
SPG11-218ENST00000559754 PROZP22891 400 aa5.06□□□□□ -1.6
SPG11-218ENST00000559754 ZEB1P37275 1124 aaPredicted RBP5.06□□□□□ -1.6
SPG11-218ENST00000559754 MTNR1BP49286 362 aa5.06□□□□□ -1.6
SPG11-218ENST00000559754 CHN2P52757 468 aa5.06□□□□□ -1.6
SPG11-218ENST00000559754 MGAT2Q10469 447 aa5.06□□□□□ -1.6
SPG11-218ENST00000559754 NOMO1Q15155 1222 aa5.06□□□□□ -1.6
SPG11-218ENST00000559754 SPDYE7PQ495Y7 208 aa5.06□□□□□ -1.6
SPG11-218ENST00000559754 AGAP9Q5VTM2 703 aa5.06□□□□□ -1.6
SPG11-218ENST00000559754 AMOTL1Q8IY63 956 aa5.06□□□□□ -1.6
SPG11-218ENST00000559754 SSH1Q8WYL5 1049 aa5.06□□□□□ -1.6
SPG11-218ENST00000559754 COQ10AQ96MF6 247 aa5.06□□□□□ -1.6
SPG11-218ENST00000559754 CRAMP1Q96RY5 1269 aa5.06□□□□□ -1.6
SPG11-218ENST00000559754 MRI1Q9BV20 369 aa5.06□□□□□ -1.6
SPG11-218ENST00000559754 WDR11Q9BZH6 1224 aa5.06□□□□□ -1.6
SPG11-218ENST00000559754 FAM30AQ9NZY2 134 aa5.06□□□□□ -1.6
SPG11-218ENST00000559754 DKK2Q9UBU2 259 aa5.06□□□□□ -1.6
SPG11-218ENST00000559754 COL4A3Q01955 1670 aa5.05□□□□□ -1.6
SPG11-218ENST00000559754 ATRNL1Q5VV63 1379 aa5.05□□□□□ -1.6
SPG11-218ENST00000559754 LMNAP02545 664 aaKnown RBP5.05□□□□□ -1.6
SPG11-218ENST00000559754 BMP5P22003 454 aa5.05□□□□□ -1.6
SPG11-218ENST00000559754 RAP2BP61225 183 aa5.05□□□□□ -1.6
SPG11-218ENST00000559754 COL10A1Q03692 680 aa5.05□□□□□ -1.6
SPG11-218ENST00000559754 PPP3CAQ08209 521 aa5.05□□□□□ -1.6
SPG11-218ENST00000559754 ABHD17BQ5VST6 288 aa5.05□□□□□ -1.6
SPG11-218ENST00000559754 AFMIDQ63HM1 303 aa5.05□□□□□ -1.6
SPG11-218ENST00000559754 EGFLAMQ63HQ2 1017 aa5.05□□□□□ -1.6
SPG11-218ENST00000559754 LHFPL2Q6ZUX7 228 aa5.05□□□□□ -1.6
SPG11-218ENST00000559754 HOXB13Q92826 284 aaPredicted RBP5.05□□□□□ -1.6
SPG11-218ENST00000559754 FUBP3Q96I24 572 aaKnown RBP eCLIP5.05□□□□□ -1.6
SPG11-218ENST00000559754 TEX101Q9BY14 249 aa5.05□□□□□ -1.6
SPG11-218ENST00000559754 CHMP4AQ9BY43 222 aa5.05□□□□□ -1.6
SPG11-218ENST00000559754 MANSC1Q9H8J5 431 aa5.05□□□□□ -1.6
SPG11-218ENST00000559754 DMRT3Q9NQL9 472 aa5.05□□□□□ -1.6
SPG11-218ENST00000559754 GPR45Q9Y5Y3 372 aa5.05□□□□□ -1.6
SPG11-218ENST00000559754 PIPSLA2A3N6 862 aa5.04□□□□□ -1.6
SPG11-218ENST00000559754 MARCH11A6NNE9 402 aa5.04□□□□□ -1.6
SPG11-218ENST00000559754 FOSP01100 380 aaPredicted RBP5.04□□□□□ -1.6
SPG11-218ENST00000559754 CFIP05156 583 aa5.04□□□□□ -1.6
SPG11-218ENST00000559754 HKR1P10072 659 aa5.04□□□□□ -1.6
SPG11-218ENST00000559754 TGM1P22735 817 aa5.04□□□□□ -1.6
SPG11-218ENST00000559754 GUCY1A2P33402 732 aa5.04□□□□□ -1.6
SPG11-218ENST00000559754 ERVK-21P61565 698 aa5.04□□□□□ -1.6
SPG11-218ENST00000559754 RESTQ13127 1097 aa5.04□□□□□ -1.6
SPG11-218ENST00000559754 UBXN2BQ14CS0 331 aa5.04□□□□□ -1.6
SPG11-218ENST00000559754 METRNLQ641Q3 311 aa5.04□□□□□ -1.6
SPG11-218ENST00000559754 OTUD7BQ6GQQ9 843 aa5.04□□□□□ -1.6
SPG11-218ENST00000559754 Q6YL49 198 aa5.04□□□□□ -1.6
SPG11-218ENST00000559754 MED25Q71SY5 747 aa5.04□□□□□ -1.6
SPG11-218ENST00000559754 BEND2Q8NDZ0 799 aa5.04□□□□□ -1.6
SPG11-218ENST00000559754 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.04□□□□□ -1.6
SPG11-218ENST00000559754 OR56A1Q8NGH5 318 aa5.04□□□□□ -1.6
SPG11-218ENST00000559754 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.04□□□□□ -1.6
SPG11-218ENST00000559754 PHACTR3Q96KR7 559 aa5.04□□□□□ -1.6
SPG11-218ENST00000559754 RNPEPQ9H4A4 650 aa5.04□□□□□ -1.6
SPG11-218ENST00000559754 RNF181Q9P0P0 153 aa5.04□□□□□ -1.6
SPG11-218ENST00000559754 DNM3Q9UQ16 869 aa5.04□□□□□ -1.6
SPG11-218ENST00000559754 PCDHGA2Q9Y5H1 932 aa5.04□□□□□ -1.6
SPG11-218ENST00000559754 NOX1Q9Y5S8 564 aa5.04□□□□□ -1.6
SPG11-218ENST00000559754 PNPLA7Q6ZV29 1317 aa5.03□□□□□ -1.6
SPG11-218ENST00000559754 CDKL5O76039 1030 aa5.03□□□□□ -1.6
SPG11-218ENST00000559754 ALAS1P13196 640 aa5.03□□□□□ -1.6
SPG11-218ENST00000559754 OSMP13725 252 aa5.03□□□□□ -1.6
SPG11-218ENST00000559754 AGXTP21549 392 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms