RNA–Protein interactions for RNA: ENST00000559686.3

SNRPA1-208, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-208ENST00000559686 ERLIN2O94905 339 aa10□□□□□ -0.81
SNRPA1-208ENST00000559686 AKAP5P24588 427 aa10□□□□□ -0.81
SNRPA1-208ENST00000559686 GDI1P31150 447 aa10□□□□□ -0.81
SNRPA1-208ENST00000559686 HOXA11P31270 313 aaPredicted RBP10□□□□□ -0.81
SNRPA1-208ENST00000559686 PXNP49023 591 aaPredicted RBP10□□□□□ -0.81
SNRPA1-208ENST00000559686 CREMQ03060 361 aa10□□□□□ -0.81
SNRPA1-208ENST00000559686 SLC5A9Q2M3M2 681 aa10□□□□□ -0.81
SNRPA1-208ENST00000559686 XKR3Q5GH77 459 aa10□□□□□ -0.81
SNRPA1-208ENST00000559686 FAM171A1Q5VUB5 890 aa10□□□□□ -0.81
SNRPA1-208ENST00000559686 LRCH2Q5VUJ6 765 aa10□□□□□ -0.81
SNRPA1-208ENST00000559686 Q6ZS52 159 aa10□□□□□ -0.81
SNRPA1-208ENST00000559686 CDR2LQ86X02 465 aaPredicted RBP10□□□□□ -0.81
SNRPA1-208ENST00000559686 EXOC6Q8TAG9 804 aa10□□□□□ -0.81
SNRPA1-208ENST00000559686 RUFY2Q8WXA3 655 aa10□□□□□ -0.81
SNRPA1-208ENST00000559686 TEKT3Q9BXF9 490 aa10□□□□□ -0.81
SNRPA1-208ENST00000559686 NIFKQ9BYG3 293 aaKnown RBP10□□□□□ -0.81
SNRPA1-208ENST00000559686 NXF3Q9H4D5 531 aaKnown RBP10□□□□□ -0.81
SNRPA1-208ENST00000559686 UBN1Q9NPG3 1134 aa10□□□□□ -0.81
SNRPA1-208ENST00000559686 C2orf42Q9NWW7 574 aa10□□□□□ -0.81
SNRPA1-208ENST00000559686 PIAS3Q9Y6X2 628 aa10□□□□□ -0.81
SNRPA1-208ENST00000559686 ANKRD11Q6UB99 2663 aaPredicted RBP10□□□□□ -0.81
SNRPA1-208ENST00000559686 AKAP13Q12802 2813 aa10□□□□□ -0.81
SNRPA1-208ENST00000559686 CEP295Q9C0D2 2601 aa9.99□□□□□ -0.81
SNRPA1-208ENST00000559686 IGKV6-21A0A0C4DH24 114 aa9.99□□□□□ -0.81
SNRPA1-208ENST00000559686 CASTOR2A6NHX0 329 aa9.99□□□□□ -0.81
SNRPA1-208ENST00000559686 SRRM3A6NNA2 597 aaPredicted RBP9.99□□□□□ -0.81
SNRPA1-208ENST00000559686 STBD1O95210 358 aa9.99□□□□□ -0.81
SNRPA1-208ENST00000559686 RHOP08100 348 aa9.99□□□□□ -0.81
SNRPA1-208ENST00000559686 GSPT1P15170 499 aaKnown RBP9.99□□□□□ -0.81
SNRPA1-208ENST00000559686 CCNE1P24864 410 aa9.99□□□□□ -0.81
SNRPA1-208ENST00000559686 SFNP31947 248 aa9.99□□□□□ -0.81
SNRPA1-208ENST00000559686 LIFRP42702 1097 aa9.99□□□□□ -0.81
SNRPA1-208ENST00000559686 NOVA1P51513 510 aaKnown RBP9.99□□□□□ -0.81
SNRPA1-208ENST00000559686 JAK3P52333 1124 aa9.99□□□□□ -0.81
SNRPA1-208ENST00000559686 LIMK1P53667 647 aa9.99□□□□□ -0.81
SNRPA1-208ENST00000559686 NPEPPSP55786 919 aa9.99□□□□□ -0.81
SNRPA1-208ENST00000559686 NUCB1Q02818 461 aa9.99□□□□□ -0.81
SNRPA1-208ENST00000559686 RTN1Q16799 776 aa9.99□□□□□ -0.81
SNRPA1-208ENST00000559686 LRSAM1Q6UWE0 723 aa9.99□□□□□ -0.81
SNRPA1-208ENST00000559686 LONP2Q86WA8 852 aa9.99□□□□□ -0.81
SNRPA1-208ENST00000559686 REXO1Q8N1G1 1221 aaKnown RBP9.99□□□□□ -0.81
SNRPA1-208ENST00000559686 PRPF31Q8WWY3 499 aaKnown RBP9.99□□□□□ -0.81
SNRPA1-208ENST00000559686 LENG9Q96B70 501 aa9.99□□□□□ -0.81
SNRPA1-208ENST00000559686 ELSPBP1Q96BH3 223 aa9.99□□□□□ -0.81
SNRPA1-208ENST00000559686 CCDC136Q96JN2 1154 aa9.99□□□□□ -0.81
SNRPA1-208ENST00000559686 TTPALQ9BTX7 342 aa9.99□□□□□ -0.81
SNRPA1-208ENST00000559686 TRMT61BQ9BVS5 477 aaKnown RBP9.99□□□□□ -0.81
SNRPA1-208ENST00000559686 TRIM6Q9C030 488 aaPredicted RBP9.99□□□□□ -0.81
SNRPA1-208ENST00000559686 SF3B1O75533 1304 aaKnown RBP eCLIP9.99□□□□□ -0.81
SNRPA1-208ENST00000559686 GOLGA8AA7E2F4 631 aa9.98□□□□□ -0.81
SNRPA1-208ENST00000559686 GOLGA8BA8MQT2 603 aa9.98□□□□□ -0.81
SNRPA1-208ENST00000559686 FOXD2O60548 495 aaPredicted RBP9.98□□□□□ -0.81
SNRPA1-208ENST00000559686 C1RP00736 705 aa9.98□□□□□ -0.81
SNRPA1-208ENST00000559686 IGHDP01880 384 aa9.98□□□□□ -0.81
SNRPA1-208ENST00000559686 CHRNB1P11230 501 aa9.98□□□□□ -0.81
SNRPA1-208ENST00000559686 CHMLP26374 656 aa9.98□□□□□ -0.81
SNRPA1-208ENST00000559686 OR1D2P34982 312 aa9.98□□□□□ -0.81
SNRPA1-208ENST00000559686 SOX9P48436 509 aa9.98□□□□□ -0.81
SNRPA1-208ENST00000559686 ZNF252P-AS1Q0IIN9 211 aa9.98□□□□□ -0.81
SNRPA1-208ENST00000559686 LAMTOR4Q0VGL1 99 aa9.98□□□□□ -0.81
SNRPA1-208ENST00000559686 HSP90AA2PQ14568 343 aaPredicted RBP9.98□□□□□ -0.81
SNRPA1-208ENST00000559686 FAM78AQ5JUQ0 283 aa9.98□□□□□ -0.81
SNRPA1-208ENST00000559686 RNF43Q68DV7 783 aa9.98□□□□□ -0.81
SNRPA1-208ENST00000559686 TCEAL6Q6IPX3 200 aa9.98□□□□□ -0.81
SNRPA1-208ENST00000559686 KIAA1211LQ6NV74 962 aa9.98□□□□□ -0.81
SNRPA1-208ENST00000559686 APOA5Q6Q788 366 aa9.98□□□□□ -0.81
SNRPA1-208ENST00000559686 VITQ6UXI7 678 aa9.98□□□□□ -0.81
SNRPA1-208ENST00000559686 ANO5Q75V66 913 aa9.98□□□□□ -0.81
SNRPA1-208ENST00000559686 SRGAP1Q7Z6B7 1085 aa9.98□□□□□ -0.81
SNRPA1-208ENST00000559686 SMC5Q8IY18 1101 aa9.98□□□□□ -0.81
SNRPA1-208ENST00000559686 KDF1Q8NAX2 398 aaPredicted RBP9.98□□□□□ -0.81
SNRPA1-208ENST00000559686 RNF149Q8NC42 400 aa9.98□□□□□ -0.81
SNRPA1-208ENST00000559686 CNNM3Q8NE01 707 aa9.98□□□□□ -0.81
SNRPA1-208ENST00000559686 TTC8Q8TAM2 541 aa9.98□□□□□ -0.81
SNRPA1-208ENST00000559686 LNX1Q8TBB1 728 aaPredicted RBP9.98□□□□□ -0.81
SNRPA1-208ENST00000559686 ZCCHC14Q8WYQ9 949 aaKnown RBP9.98□□□□□ -0.81
SNRPA1-208ENST00000559686 DNASE1L2Q92874 299 aa9.98□□□□□ -0.81
SNRPA1-208ENST00000559686 TCEAL3Q969E4 200 aa9.98□□□□□ -0.81
SNRPA1-208ENST00000559686 TCEAL4Q96EI5 215 aa9.98□□□□□ -0.81
SNRPA1-208ENST00000559686 TCEANC2Q96MN5 208 aa9.98□□□□□ -0.81
SNRPA1-208ENST00000559686 LSM14BQ9BX40 385 aaKnown RBP9.98□□□□□ -0.81
SNRPA1-208ENST00000559686 ADAM33Q9BZ11 813 aa9.98□□□□□ -0.81
SNRPA1-208ENST00000559686 GLT8D2Q9H1C3 349 aa9.98□□□□□ -0.81
SNRPA1-208ENST00000559686 ZNF334Q9HCZ1 680 aaPredicted RBP9.98□□□□□ -0.81
SNRPA1-208ENST00000559686 RBM28Q9NW13 759 aaKnown RBP9.98□□□□□ -0.81
SNRPA1-208ENST00000559686 PARP2Q9UGN5 583 aa9.98□□□□□ -0.81
SNRPA1-208ENST00000559686 ZFYVE26Q68DK2 2539 aa9.97□□□□□ -0.81
SNRPA1-208ENST00000559686 SLC38A8A6NNN8 435 aa9.97□□□□□ -0.81
SNRPA1-208ENST00000559686 K7ESF4 209 aa9.97□□□□□ -0.81
SNRPA1-208ENST00000559686 ZBTB43O43298 467 aa9.97□□□□□ -0.81
SNRPA1-208ENST00000559686 TSPAN1O60635 241 aa9.97□□□□□ -0.81
SNRPA1-208ENST00000559686 KIF4AO95239 1232 aa9.97□□□□□ -0.81
SNRPA1-208ENST00000559686 NPTXRO95502 500 aa9.97□□□□□ -0.81
SNRPA1-208ENST00000559686 ZNF806P0C7X5 589 aa9.97□□□□□ -0.81
SNRPA1-208ENST00000559686 FCARP24071 287 aa9.97□□□□□ -0.81
SNRPA1-208ENST00000559686 HOXA9P31269 272 aa9.97□□□□□ -0.81
SNRPA1-208ENST00000559686 CNR2P34972 360 aa9.97□□□□□ -0.81
SNRPA1-208ENST00000559686 VIPR2P41587 438 aa9.97□□□□□ -0.81
SNRPA1-208ENST00000559686 RBM25P49756 843 aaKnown RBP9.97□□□□□ -0.81
SNRPA1-208ENST00000559686 FUT2Q10981 343 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms