RNA–Protein interactions for RNA: ENST00000559511.5

SPG11-217, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-217ENST00000559511 OPA1O60313 960 aa11.88□□□□□ -0.51
SPG11-217ENST00000559511 GRIN3BO60391 1043 aa11.88□□□□□ -0.51
SPG11-217ENST00000559511 MTA2O94776 668 aa11.88□□□□□ -0.51
SPG11-217ENST00000559511 SLC25A27O95847 323 aa11.88□□□□□ -0.51
SPG11-217ENST00000559511 COMTP21964 271 aa11.88□□□□□ -0.51
SPG11-217ENST00000559511 PDE6CP51160 858 aa11.88□□□□□ -0.51
SPG11-217ENST00000559511 MESDQ14696 234 aa11.88□□□□□ -0.51
SPG11-217ENST00000559511 GPR162Q16538 588 aa11.88□□□□□ -0.51
SPG11-217ENST00000559511 FASTKD5Q7L8L6 764 aaKnown RBP11.88□□□□□ -0.51
SPG11-217ENST00000559511 CPNE8Q86YQ8 564 aa11.88□□□□□ -0.51
SPG11-217ENST00000559511 EIF1ADQ8N9N8 165 aaKnown RBP11.88□□□□□ -0.51
SPG11-217ENST00000559511 FAM76AQ8TAV0 307 aa11.88□□□□□ -0.51
SPG11-217ENST00000559511 BTBD6Q96KE9 485 aa11.88□□□□□ -0.51
SPG11-217ENST00000559511 FGD4Q96M96 766 aa11.88□□□□□ -0.51
SPG11-217ENST00000559511 RUFY1Q96T51 708 aa11.88□□□□□ -0.51
SPG11-217ENST00000559511 PCYT2Q99447 389 aa11.88□□□□□ -0.51
SPG11-217ENST00000559511 PTPRJQ12913 1337 aa11.88□□□□□ -0.51
SPG11-217ENST00000559511 IGKV6D-21A0A0A0MT36 114 aa11.87□□□□□ -0.51
SPG11-217ENST00000559511 GSTTP1A0A1W2PQM5 241 aa11.87□□□□□ -0.51
SPG11-217ENST00000559511 IQCA1LA6NCM1 817 aa11.87□□□□□ -0.51
SPG11-217ENST00000559511 H0YCG3 227 aa11.87□□□□□ -0.51
SPG11-217ENST00000559511 DAPK3O43293 454 aa11.87□□□□□ -0.51
SPG11-217ENST00000559511 FARP2O94887 1054 aaPredicted RBP11.87□□□□□ -0.51
SPG11-217ENST00000559511 CLSTN1O94985 981 aa11.87□□□□□ -0.51
SPG11-217ENST00000559511 EDN1P05305 212 aa11.87□□□□□ -0.51
SPG11-217ENST00000559511 PGK2P07205 417 aa11.87□□□□□ -0.51
SPG11-217ENST00000559511 KRT5P13647 590 aa11.87□□□□□ -0.51
SPG11-217ENST00000559511 ARL2P36404 184 aa11.87□□□□□ -0.51
SPG11-217ENST00000559511 HSPA9P38646 679 aaKnown RBP11.87□□□□□ -0.51
SPG11-217ENST00000559511 ACOT2P49753 483 aa11.87□□□□□ -0.51
SPG11-217ENST00000559511 PTENP60484 403 aa11.87□□□□□ -0.51
SPG11-217ENST00000559511 CLDN10P78369 228 aa11.87□□□□□ -0.51
SPG11-217ENST00000559511 ENPEPQ07075 957 aa11.87□□□□□ -0.51
SPG11-217ENST00000559511 PPFIA1Q13136 1202 aa11.87□□□□□ -0.51
SPG11-217ENST00000559511 CFAP58Q5T655 872 aa11.87□□□□□ -0.51
SPG11-217ENST00000559511 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.87□□□□□ -0.51
SPG11-217ENST00000559511 PSPC1Q8WXF1 523 aaKnown RBP11.87□□□□□ -0.51
SPG11-217ENST00000559511 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.87□□□□□ -0.51
SPG11-217ENST00000559511 ZBTB45Q96K62 511 aaPredicted RBP11.87□□□□□ -0.51
SPG11-217ENST00000559511 ZSWIM1Q9BR11 485 aa11.87□□□□□ -0.51
SPG11-217ENST00000559511 NUP85Q9BW27 656 aa11.87□□□□□ -0.51
SPG11-217ENST00000559511 TRPC6Q9Y210 931 aa11.87□□□□□ -0.51
SPG11-217ENST00000559511 STYXL1Q9Y6J8 313 aa11.87□□□□□ -0.51
SPG11-217ENST00000559511 LRRIQ4A6NIV6 560 aa11.87□□□□□ -0.51
SPG11-217ENST00000559511 CYP1A2P05177 515 aa11.87□□□□□ -0.51
SPG11-217ENST00000559511 POTEJP0CG39 1038 aa11.87□□□□□ -0.51
SPG11-217ENST00000559511 OSBPP22059 807 aa11.87□□□□□ -0.51
SPG11-217ENST00000559511 GCNT1Q02742 428 aa11.87□□□□□ -0.51
SPG11-217ENST00000559511 STRN3Q13033 797 aa11.87□□□□□ -0.51
SPG11-217ENST00000559511 PSMD6Q15008 389 aa11.87□□□□□ -0.51
SPG11-217ENST00000559511 ZBTB41Q5SVQ8 909 aa11.87□□□□□ -0.51
SPG11-217ENST00000559511 TDRD10Q5VZ19 366 aaKnown RBP11.87□□□□□ -0.51
SPG11-217ENST00000559511 CRELD2Q6UXH1 353 aaPredicted RBP11.87□□□□□ -0.51
SPG11-217ENST00000559511 LEKR1Q6ZMV7 388 aa11.87□□□□□ -0.51
SPG11-217ENST00000559511 MAATS1Q7Z4T9 603 aa11.87□□□□□ -0.51
SPG11-217ENST00000559511 CCDC26Q8TAB7 109 aa11.87□□□□□ -0.51
SPG11-217ENST00000559511 ZNF564Q8TBZ8 553 aaPredicted RBP11.87□□□□□ -0.51
SPG11-217ENST00000559511 SEC14L1Q92503 715 aa11.87□□□□□ -0.51
SPG11-217ENST00000559511 ZNF653Q96CK0 615 aa11.87□□□□□ -0.51
SPG11-217ENST00000559511 TRIM51Q9BSJ1 452 aa11.87□□□□□ -0.51
SPG11-217ENST00000559511 NIFKQ9BYG3 293 aaKnown RBP11.87□□□□□ -0.51
SPG11-217ENST00000559511 AGO2Q9UKV8 859 aaKnown RBP11.87□□□□□ -0.51
SPG11-217ENST00000559511 DNAJC25-GNG10A0A024R161 153 aa11.86□□□□□ -0.51
SPG11-217ENST00000559511 MIF4GDA9UHW6 222 aaKnown RBP11.86□□□□□ -0.51
SPG11-217ENST00000559511 FLT3P36888 993 aa11.86□□□□□ -0.51
SPG11-217ENST00000559511 NAMPTP43490 491 aa11.86□□□□□ -0.51
SPG11-217ENST00000559511 PEX5P50542 639 aa11.86□□□□□ -0.51
SPG11-217ENST00000559511 ZACNQ401N2 412 aa11.86□□□□□ -0.51
SPG11-217ENST00000559511 EEPD1Q7L9B9 569 aa11.86□□□□□ -0.51
SPG11-217ENST00000559511 DEPTORQ8TB45 409 aa11.86□□□□□ -0.51
SPG11-217ENST00000559511 SLC7A3Q8WY07 619 aa11.86□□□□□ -0.51
SPG11-217ENST00000559511 CD101Q93033 1021 aa11.86□□□□□ -0.51
SPG11-217ENST00000559511 RPS6KC1Q96S38 1066 aa11.86□□□□□ -0.51
SPG11-217ENST00000559511 C1orf112Q9NSG2 853 aa11.86□□□□□ -0.51
SPG11-217ENST00000559511 CALCOCO1Q9P1Z2 691 aa11.86□□□□□ -0.51
SPG11-217ENST00000559511 SHOX2O60902 331 aaPredicted RBP11.86□□□□□ -0.51
SPG11-217ENST00000559511 ZC3H11AO75152 810 aaKnown RBP eCLIP11.86□□□□□ -0.51
SPG11-217ENST00000559511 RPS6KA5O75582 802 aa11.86□□□□□ -0.51
SPG11-217ENST00000559511 PIGRP01833 764 aa11.86□□□□□ -0.51
SPG11-217ENST00000559511 HLA-DRAP01903 254 aa11.86□□□□□ -0.51
SPG11-217ENST00000559511 C4BPAP04003 597 aaKnown RBP11.86□□□□□ -0.51
SPG11-217ENST00000559511 TGFB3P10600 412 aa11.86□□□□□ -0.51
SPG11-217ENST00000559511 TNNI1P19237 187 aa11.86□□□□□ -0.51
SPG11-217ENST00000559511 ABCD1P33897 745 aa11.86□□□□□ -0.51
SPG11-217ENST00000559511 HSD17B3P37058 310 aa11.86□□□□□ -0.51
SPG11-217ENST00000559511 DRP2Q13474 957 aa11.86□□□□□ -0.51
SPG11-217ENST00000559511 SNAPC2Q13487 334 aa11.86□□□□□ -0.51
SPG11-217ENST00000559511 UAP1Q16222 522 aaPredicted RBP11.86□□□□□ -0.51
SPG11-217ENST00000559511 CLEC16AQ2KHT3 1053 aa11.86□□□□□ -0.51
SPG11-217ENST00000559511 SPOPLQ6IQ16 392 aa11.86□□□□□ -0.51
SPG11-217ENST00000559511 ACAD10Q6JQN1 1059 aa11.86□□□□□ -0.51
SPG11-217ENST00000559511 LRRC31Q6UY01 552 aa11.86□□□□□ -0.51
SPG11-217ENST00000559511 PNMA8AQ86V59 439 aaPredicted RBP11.86□□□□□ -0.51
SPG11-217ENST00000559511 ZDHHC14Q8IZN3 488 aa11.86□□□□□ -0.51
SPG11-217ENST00000559511 SH2D3CQ8N5H7 860 aa11.86□□□□□ -0.51
SPG11-217ENST00000559511 UBL4BQ8N7F7 174 aa11.86□□□□□ -0.51
SPG11-217ENST00000559511 ATP8B4Q8TF62 1192 aa11.86□□□□□ -0.51
SPG11-217ENST00000559511 KCNN1Q92952 543 aa11.86□□□□□ -0.51
SPG11-217ENST00000559511 SLC10A4Q96EP9 437 aa11.86□□□□□ -0.51
SPG11-217ENST00000559511 FNBP1Q96RU3 617 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms