RNA–Protein interactions for RNA: ENST00000559485.2

RGPD1-204, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,247 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-204ENST00000559485 ANKFY1Q9P2R3 1169 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 TMEM94Q12767 1356 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 PCDH11XQ9BZA7 1347 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 TIAM2Q8IVF5 1701 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 SMCO2A6NFE2 343 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 SMIM23A6NLE4 172 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 F8W810 466 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 HNRNPRO43390 633 aaKnown RBP2.52□□□□□ -2.01
RGPD1-204ENST00000559485 SYNCRIPO60506 623 aaKnown RBP2.52□□□□□ -2.01
RGPD1-204ENST00000559485 RANBP6O60518 1105 aaKnown RBP2.52□□□□□ -2.01
RGPD1-204ENST00000559485 N4BP1O75113 896 aaKnown RBP2.52□□□□□ -2.01
RGPD1-204ENST00000559485 COBLO75128 1261 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 CTDNEP1O95476 244 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 EYA4O95677 639 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 BAG2O95816 211 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 CLPTM1O96005 669 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 FGAP02671 866 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 IFNA16P05015 189 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 SERPINB6P35237 376 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 CEBPAP49715 358 aaPredicted RBP2.52□□□□□ -2.01
RGPD1-204ENST00000559485 FKBP4Q02790 459 aaKnown RBP eCLIP2.52□□□□□ -2.01
RGPD1-204ENST00000559485 RUNX1T1Q06455 604 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 DIXDC1Q155Q3 683 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 C5orf22Q49AR2 442 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 MPRIPQ6WCQ1 1025 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 SETD3Q86TU7 594 aaPredicted RBP2.52□□□□□ -2.01
RGPD1-204ENST00000559485 AKAP14Q86UN6 197 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 CCDC25Q86WR0 208 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 MICU3Q86XE3 530 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 CHCHD4Q8N4Q1 142 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 PHC3Q8NDX5 983 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 TTLL11Q8NHH1 800 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 ATL1Q8WXF7 558 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 HSPH1Q92598 858 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 SYMPKQ92797 1274 aaKnown RBP2.52□□□□□ -2.01
RGPD1-204ENST00000559485 POP5Q969H6 163 aaKnown RBP2.52□□□□□ -2.01
RGPD1-204ENST00000559485 CNOT6LQ96LI5 555 aaKnown RBP2.52□□□□□ -2.01
RGPD1-204ENST00000559485 ZIM3Q96PE6 472 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 TGS1Q96RS0 853 aaKnown RBP2.52□□□□□ -2.01
RGPD1-204ENST00000559485 TEX13BQ9BXU2 312 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 PITPNM3Q9BZ71 974 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 NDST4Q9H3R1 872 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 C6orf50Q9HD87 102 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 HMG20AQ9NP66 347 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 NPAP1Q9NZP6 1156 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 ZNF180Q9UJW8 692 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 ERVK-11Q9UQG0 969 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 B3GNT3Q9Y2A9 372 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 STARD13Q9Y3M8 1113 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 FRMPD4Q14CM0 1322 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 PNPLA7Q6ZV29 1317 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 ZC3H4Q9UPT8 1303 aaKnown RBP2.52□□□□□ -2.01
RGPD1-204ENST00000559485 ROBO2Q9HCK4 1378 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 HTR3EA5X5Y0 456 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 SAGE2PA6NJ88 616 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 KRIT1O00522 736 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 H2AFYO75367 372 aaKnown RBP2.52□□□□□ -2.01
RGPD1-204ENST00000559485 RHOBTB3O94955 611 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 KLHL2O95198 593 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 CCNB1P14635 433 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 CHN1P15882 459 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 M6PRP20645 277 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 ACAT1P24752 427 aaKnown RBP2.52□□□□□ -2.01
RGPD1-204ENST00000559485 RXRBP28702 533 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 CHRNA3P32297 505 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 RFC5P40937 340 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 ATP2C1P98194 919 aaPredicted RBP2.52□□□□□ -2.01
RGPD1-204ENST00000559485 OCRLQ01968 901 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 RAD51Q06609 339 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 TOP3AQ13472 1001 aaPredicted RBP2.52□□□□□ -2.01
RGPD1-204ENST00000559485 DPYSQ14117 519 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 STAT4Q14765 748 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 CNGA2Q16280 664 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 KYNUQ16719 465 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 TBC1D25Q3MII6 688 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 BBS9Q3SYG4 887 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 LIN52Q52LA3 116 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 IFIT1BQ5T764 474 aaKnown RBP2.52□□□□□ -2.01
RGPD1-204ENST00000559485 SMYD5Q6GMV2 418 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 ANGPTL8Q6UXH0 198 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP2.52□□□□□ -2.01
RGPD1-204ENST00000559485 SH3RF1Q7Z6J0 888 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 PCGF5Q86SE9 256 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 USP37Q86T82 979 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 SCUBE1Q8IWY4 988 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 IFNL2Q8IZJ0 200 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 XXYLT1Q8NBI6 393 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 ANGPTL6Q8NI99 470 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 PRPF31Q8WWY3 499 aaKnown RBP2.52□□□□□ -2.01
RGPD1-204ENST00000559485 DPF2Q92785 391 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 DLG3Q92796 817 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 PHKBQ93100 1093 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 RPS6KC1Q96S38 1066 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 KCNK16Q96T55 309 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 FMO2Q99518 471 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 TUBA1CQ9BQE3 449 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 DDX23Q9BUQ8 820 aaKnown RBP2.52□□□□□ -2.01
RGPD1-204ENST00000559485 TMEM109Q9BVC6 243 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 PHACTR1Q9C0D0 580 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 SLC6A15Q9H2J7 730 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms