RNA–Protein interactions for RNA: ENST00000559281.5

TPM1-218, Transcript of tropomyosin 1, humanhuman

TSL 5 BASIC

Gene TPM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-218ENST00000559281 SLC16A4O15374 487 aa19.48■□□□□ 0.71
TPM1-218ENST00000559281 MCF2P10911 925 aa19.48■□□□□ 0.71
TPM1-218ENST00000559281 GRM5P41594 1212 aa19.48■□□□□ 0.71
TPM1-218ENST00000559281 MAPK7Q13164 816 aa19.48■□□□□ 0.71
TPM1-218ENST00000559281 CUL4AQ13619 759 aa19.48■□□□□ 0.71
TPM1-218ENST00000559281 FAM171A1Q5VUB5 890 aa19.48■□□□□ 0.71
TPM1-218ENST00000559281 DCLRE1AQ6PJP8 1040 aa19.48■□□□□ 0.71
TPM1-218ENST00000559281 CEP57Q86XR8 500 aa19.48■□□□□ 0.71
TPM1-218ENST00000559281 STAMQ92783 540 aa19.48■□□□□ 0.71
TPM1-218ENST00000559281 B3GALT6Q96L58 329 aa19.48■□□□□ 0.71
TPM1-218ENST00000559281 TARS2Q9BW92 718 aaKnown RBP19.48■□□□□ 0.71
TPM1-218ENST00000559281 PTPRHQ9HD43 1115 aa19.48■□□□□ 0.71
TPM1-218ENST00000559281 SLC38A7Q9NVC3 462 aa19.48■□□□□ 0.71
TPM1-218ENST00000559281 LARSQ9P2J5 1176 aaKnown RBP19.48■□□□□ 0.71
TPM1-218ENST00000559281 LIMD1Q9UGP4 676 aa19.48■□□□□ 0.71
TPM1-218ENST00000559281 TGM5O43548 720 aa19.47■□□□□ 0.71
TPM1-218ENST00000559281 TRAPPC3O43617 180 aa19.47■□□□□ 0.71
TPM1-218ENST00000559281 B3GAT3O94766 335 aa19.47■□□□□ 0.71
TPM1-218ENST00000559281 KIF4AO95239 1232 aa19.47■□□□□ 0.71
TPM1-218ENST00000559281 LONP1P36776 959 aaKnown RBP19.47■□□□□ 0.71
TPM1-218ENST00000559281 SLC12A3P55017 1021 aa19.47■□□□□ 0.71
TPM1-218ENST00000559281 RAD51AP2Q09MP3 1159 aa19.47■□□□□ 0.71
TPM1-218ENST00000559281 NAB2Q15742 525 aa19.47■□□□□ 0.71
TPM1-218ENST00000559281 MPZL3Q6UWV2 235 aa19.47■□□□□ 0.71
TPM1-218ENST00000559281 RASSF8Q8NHQ8 419 aa19.47■□□□□ 0.71
TPM1-218ENST00000559281 HASPINQ8TF76 798 aa19.47■□□□□ 0.71
TPM1-218ENST00000559281 DDX27Q96GQ7 796 aaKnown RBP19.47■□□□□ 0.71
TPM1-218ENST00000559281 ACAP3Q96P50 834 aa19.47■□□□□ 0.71
TPM1-218ENST00000559281 CDT1Q9H211 546 aa19.47■□□□□ 0.71
TPM1-218ENST00000559281 ZDHHC7Q9NXF8 308 aa19.47■□□□□ 0.71
TPM1-218ENST00000559281 CACNG4Q9UBN1 327 aa19.47■□□□□ 0.71
TPM1-218ENST00000559281 SMIM28A0A1B0GU29 152 aa19.46■□□□□ 0.71
TPM1-218ENST00000559281 TMEM189-UBE2V1I3L0A0 370 aa19.46■□□□□ 0.71
TPM1-218ENST00000559281 TMEM119Q4V9L6 283 aa19.46■□□□□ 0.71
TPM1-218ENST00000559281 RTP2Q5QGT7 225 aa19.46■□□□□ 0.71
TPM1-218ENST00000559281 LILRA6Q6PI73 481 aa19.46■□□□□ 0.71
TPM1-218ENST00000559281 GLYCTKQ8IVS8 523 aa19.46■□□□□ 0.71
TPM1-218ENST00000559281 FBXL6Q8N531 539 aa19.46■□□□□ 0.71
TPM1-218ENST00000559281 PIK3R5Q8WYR1 880 aa19.46■□□□□ 0.71
TPM1-218ENST00000559281 PPP1R10Q96QC0 940 aaKnown RBP19.46■□□□□ 0.71
TPM1-218ENST00000559281 PIDD1Q9HB75 910 aa19.46■□□□□ 0.71
TPM1-218ENST00000559281 VPS37CA5D8V6 355 aaPredicted RBP19.45■□□□□ 0.7
TPM1-218ENST00000559281 TOM1L1O75674 476 aa19.45■□□□□ 0.7
TPM1-218ENST00000559281 BRD1O95696 1058 aa19.45■□□□□ 0.7
TPM1-218ENST00000559281 SPATA31D3P0C874 917 aa19.45■□□□□ 0.7
TPM1-218ENST00000559281 RPL17P18621 184 aaKnown RBP19.45■□□□□ 0.7
TPM1-218ENST00000559281 SCP2P22307 547 aa19.45■□□□□ 0.7
TPM1-218ENST00000559281 OSTNP61366 133 aa19.45■□□□□ 0.7
TPM1-218ENST00000559281 SF3A1Q15459 793 aaKnown RBP19.45■□□□□ 0.7
TPM1-218ENST00000559281 PSMD5Q16401 504 aa19.45■□□□□ 0.7
TPM1-218ENST00000559281 GLRA4Q5JXX5 417 aa19.45■□□□□ 0.7
TPM1-218ENST00000559281 PRSS55Q6UWB4 352 aaPredicted RBP19.45■□□□□ 0.7
TPM1-218ENST00000559281 ZPBP2Q6X784 338 aa19.45■□□□□ 0.7
TPM1-218ENST00000559281 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.45■□□□□ 0.7
TPM1-218ENST00000559281 SPATA31D4Q6ZUB0 917 aa19.45■□□□□ 0.7
TPM1-218ENST00000559281 TAS1R3Q7RTX0 852 aa19.45■□□□□ 0.7
TPM1-218ENST00000559281 TMEM161BQ8NDZ6 487 aa19.45■□□□□ 0.7
TPM1-218ENST00000559281 LNX1Q8TBB1 728 aaPredicted RBP19.45■□□□□ 0.7
TPM1-218ENST00000559281 SMG7Q92540 1137 aaKnown RBP19.45■□□□□ 0.7
TPM1-218ENST00000559281 PRRX2Q99811 253 aa19.45■□□□□ 0.7
TPM1-218ENST00000559281 CXCL16Q9H2A7 254 aa19.45■□□□□ 0.7
TPM1-218ENST00000559281 WDR6Q9NNW5 1121 aaKnown RBP19.45■□□□□ 0.7
TPM1-218ENST00000559281 ODF2LQ9ULJ1 636 aa19.45■□□□□ 0.7
TPM1-218ENST00000559281 MYBP10242 640 aa19.44■□□□□ 0.7
TPM1-218ENST00000559281 PROZP22891 400 aa19.44■□□□□ 0.7
TPM1-218ENST00000559281 CLCNKBP51801 687 aa19.44■□□□□ 0.7
TPM1-218ENST00000559281 UPP1Q16831 310 aa19.44■□□□□ 0.7
TPM1-218ENST00000559281 XKR4Q5GH76 650 aa19.44■□□□□ 0.7
TPM1-218ENST00000559281 ALKAL1Q6UXT8 129 aa19.44■□□□□ 0.7
TPM1-218ENST00000559281 CEP120Q8N960 986 aa19.44■□□□□ 0.7
TPM1-218ENST00000559281 ASIC4Q96FT7 647 aa19.44■□□□□ 0.7
TPM1-218ENST00000559281 CLDN3O15551 220 aa19.43■□□□□ 0.7
TPM1-218ENST00000559281 RFPL2O75678 378 aa19.43■□□□□ 0.7
TPM1-218ENST00000559281 MAPTP10636 758 aaKnown RBP19.43■□□□□ 0.7
TPM1-218ENST00000559281 LIN9Q5TKA1 542 aa19.43■□□□□ 0.7
TPM1-218ENST00000559281 CLSTN3Q9BQT9 956 aa19.43■□□□□ 0.7
TPM1-218ENST00000559281 PRKD2Q9BZL6 878 aa19.43■□□□□ 0.7
TPM1-218ENST00000559281 ANKFY1Q9P2R3 1169 aa19.43■□□□□ 0.7
TPM1-218ENST00000559281 TECTAO75443 2155 aa19.43■□□□□ 0.7
TPM1-218ENST00000559281 ZMYND10O75800 440 aa19.42■□□□□ 0.7
TPM1-218ENST00000559281 PAPLNO95428 1278 aa19.42■□□□□ 0.7
TPM1-218ENST00000559281 KRT18P05783 430 aaKnown RBP19.42■□□□□ 0.7
TPM1-218ENST00000559281 ASGR2P07307 311 aa19.42■□□□□ 0.7
TPM1-218ENST00000559281 HARSP12081 509 aaKnown RBP19.42■□□□□ 0.7
TPM1-218ENST00000559281 KCNE1P15382 129 aa19.42■□□□□ 0.7
TPM1-218ENST00000559281 FGFR3P22607 806 aa19.42■□□□□ 0.7
TPM1-218ENST00000559281 GBP2P32456 591 aaPredicted RBP19.42■□□□□ 0.7
TPM1-218ENST00000559281 RPL9P32969 192 aaKnown RBP19.42■□□□□ 0.7
TPM1-218ENST00000559281 ABCD1P33897 745 aa19.42■□□□□ 0.7
TPM1-218ENST00000559281 MATR3P43243 847 aaKnown RBP eCLIP19.42■□□□□ 0.7
TPM1-218ENST00000559281 DHX8Q14562 1220 aaKnown RBP19.42■□□□□ 0.7
TPM1-218ENST00000559281 NOLC1Q14978 699 aaKnown RBP eCLIP19.42■□□□□ 0.7
TPM1-218ENST00000559281 ARSHQ5FYA8 562 aa19.42■□□□□ 0.7
TPM1-218ENST00000559281 ANKS3Q6ZW76 656 aa19.42■□□□□ 0.7
TPM1-218ENST00000559281 GPBP1Q86WP2 473 aa19.42■□□□□ 0.7
TPM1-218ENST00000559281 MYCT1Q8N699 235 aa19.42■□□□□ 0.7
TPM1-218ENST00000559281 BICD1Q96G01 975 aa19.42■□□□□ 0.7
TPM1-218ENST00000559281 INTS4Q96HW7 963 aaKnown RBP19.42■□□□□ 0.7
TPM1-218ENST00000559281 ZBTB45Q96K62 511 aaPredicted RBP19.42■□□□□ 0.7
TPM1-218ENST00000559281 SNX27Q96L92 541 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms