RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 PPP3CAQ08209 521 aa19.6■□□□□ 0.73
CLPX-203ENST00000558958 LINC01599Q8WXQ3 324 aa19.6■□□□□ 0.73
CLPX-203ENST00000558958 VWCEQ96DN2 955 aa19.6■□□□□ 0.73
CLPX-203ENST00000558958 FAM212AQ96EL1 285 aa19.6■□□□□ 0.73
CLPX-203ENST00000558958 CGRRF1Q99675 332 aa19.6■□□□□ 0.73
CLPX-203ENST00000558958 RNF39Q9H2S5 420 aa19.6■□□□□ 0.73
CLPX-203ENST00000558958 PLEKHA5Q9HAU0 1116 aa19.6■□□□□ 0.73
CLPX-203ENST00000558958 SCN5AQ14524 2016 aa19.6■□□□□ 0.73
CLPX-203ENST00000558958 ALPK3Q96L96 1907 aa19.6■□□□□ 0.73
CLPX-203ENST00000558958 C9IYK1 514 aa19.6■□□□□ 0.73
CLPX-203ENST00000558958 RECQL4O94761 1208 aa19.6■□□□□ 0.73
CLPX-203ENST00000558958 SKIP12755 728 aa19.6■□□□□ 0.73
CLPX-203ENST00000558958 AKAP5P24588 427 aa19.6■□□□□ 0.73
CLPX-203ENST00000558958 GTF2H1P32780 548 aa19.6■□□□□ 0.73
CLPX-203ENST00000558958 FMO5P49326 533 aa19.6■□□□□ 0.73
CLPX-203ENST00000558958 YARSP54577 528 aaKnown RBP19.6■□□□□ 0.73
CLPX-203ENST00000558958 TCTN1Q2MV58 587 aa19.6■□□□□ 0.73
CLPX-203ENST00000558958 FKBP15Q5T1M5 1219 aa19.6■□□□□ 0.73
CLPX-203ENST00000558958 MFSD5Q6N075 450 aa19.6■□□□□ 0.73
CLPX-203ENST00000558958 ALKAL1Q6UXT8 129 aa19.6■□□□□ 0.73
CLPX-203ENST00000558958 SLC24A5Q71RS6 500 aa19.6■□□□□ 0.73
CLPX-203ENST00000558958 DEFB128Q7Z7B8 93 aa19.6■□□□□ 0.73
CLPX-203ENST00000558958 CD302Q8IX05 232 aa19.6■□□□□ 0.73
CLPX-203ENST00000558958 HACE1Q8IYU2 909 aa19.6■□□□□ 0.73
CLPX-203ENST00000558958 ANP32BQ92688 251 aaKnown RBP19.6■□□□□ 0.73
CLPX-203ENST00000558958 APOL6Q9BWW8 343 aa19.6■□□□□ 0.73
CLPX-203ENST00000558958 ASB7Q9H672 318 aa19.6■□□□□ 0.73
CLPX-203ENST00000558958 TOPORSQ9NS56 1045 aaPredicted RBP19.6■□□□□ 0.73
CLPX-203ENST00000558958 TET1Q8NFU7 2136 aa19.59■□□□□ 0.73
CLPX-203ENST00000558958 PTPRJQ12913 1337 aa19.59■□□□□ 0.73
CLPX-203ENST00000558958 CCDC85CA6NKD9 419 aa19.59■□□□□ 0.73
CLPX-203ENST00000558958 TULP1O00294 542 aaPredicted RBP19.59■□□□□ 0.73
CLPX-203ENST00000558958 PMM2O15305 246 aa19.59■□□□□ 0.73
CLPX-203ENST00000558958 TNNI1P19237 187 aa19.59■□□□□ 0.73
CLPX-203ENST00000558958 PBX1P40424 430 aa19.59■□□□□ 0.73
CLPX-203ENST00000558958 GCLMP48507 274 aa19.59■□□□□ 0.73
CLPX-203ENST00000558958 FAM189BP81408 668 aa19.59■□□□□ 0.73
CLPX-203ENST00000558958 CBWD6Q4V339 395 aa19.59■□□□□ 0.73
CLPX-203ENST00000558958 CBWD3Q5JTY5 395 aa19.59■□□□□ 0.73
CLPX-203ENST00000558958 CBWD5Q5RIA9 395 aa19.59■□□□□ 0.73
CLPX-203ENST00000558958 WDR49Q8IV35 697 aa19.59■□□□□ 0.73
CLPX-203ENST00000558958 ZNF516Q92618 1163 aa19.59■□□□□ 0.73
CLPX-203ENST00000558958 SNX27Q96L92 541 aa19.59■□□□□ 0.73
CLPX-203ENST00000558958 ERGIC2Q96RQ1 377 aa19.59■□□□□ 0.73
CLPX-203ENST00000558958 HTATIP2Q9BUP3 242 aa19.59■□□□□ 0.73
CLPX-203ENST00000558958 C1orf112Q9NSG2 853 aa19.59■□□□□ 0.73
CLPX-203ENST00000558958 PARP2Q9UGN5 583 aa19.59■□□□□ 0.73
CLPX-203ENST00000558958 GTPBP10A4D1E9 387 aaKnown RBP19.58■□□□□ 0.72
CLPX-203ENST00000558958 ENPP3O14638 875 aa19.58■□□□□ 0.72
CLPX-203ENST00000558958 N4BP1O75113 896 aaKnown RBP19.58■□□□□ 0.72
CLPX-203ENST00000558958 ITGA4P13612 1032 aa19.58■□□□□ 0.72
CLPX-203ENST00000558958 ATF7P17544 494 aaPredicted RBP19.58■□□□□ 0.72
CLPX-203ENST00000558958 CDC25BP30305 580 aa19.58■□□□□ 0.72
CLPX-203ENST00000558958 PTPN21Q16825 1174 aa19.58■□□□□ 0.72
CLPX-203ENST00000558958 LMBRD2Q68DH5 695 aaPredicted RBP19.58■□□□□ 0.72
CLPX-203ENST00000558958 ZNF598Q86UK7 904 aaKnown RBP19.58■□□□□ 0.72
CLPX-203ENST00000558958 ECHDC2Q86YB7 292 aa19.58■□□□□ 0.72
CLPX-203ENST00000558958 EFCAB13Q8IY85 973 aa19.58■□□□□ 0.72
CLPX-203ENST00000558958 TMEM199Q8N511 208 aa19.58■□□□□ 0.72
CLPX-203ENST00000558958 TMEM117Q9H0C3 514 aa19.58■□□□□ 0.72
CLPX-203ENST00000558958 MMRN2Q9H8L6 949 aa19.58■□□□□ 0.72
CLPX-203ENST00000558958 TMEM8AQ9HCN3 771 aa19.58■□□□□ 0.72
CLPX-203ENST00000558958 A0A1W2PQC6 194 aa19.57■□□□□ 0.72
CLPX-203ENST00000558958 MEIS3P2A8K0S8 358 aa19.57■□□□□ 0.72
CLPX-203ENST00000558958 P4HA2O15460 535 aa19.57■□□□□ 0.72
CLPX-203ENST00000558958 CSF2RAP15509 400 aa19.57■□□□□ 0.72
CLPX-203ENST00000558958 MXI1P50539 228 aa19.57■□□□□ 0.72
CLPX-203ENST00000558958 AP3M2P53677 418 aa19.57■□□□□ 0.72
CLPX-203ENST00000558958 MYL7Q01449 175 aa19.57■□□□□ 0.72
CLPX-203ENST00000558958 XKR4Q5GH76 650 aa19.57■□□□□ 0.72
CLPX-203ENST00000558958 KRT39Q6A163 491 aa19.57■□□□□ 0.72
CLPX-203ENST00000558958 CNKSR3Q6P9H4 555 aa19.57■□□□□ 0.72
CLPX-203ENST00000558958 C15orf39Q6ZRI6 1047 aa19.57■□□□□ 0.72
CLPX-203ENST00000558958 SV2AQ7L0J3 742 aa19.57■□□□□ 0.72
CLPX-203ENST00000558958 VSTM4Q8IW00 320 aa19.57■□□□□ 0.72
CLPX-203ENST00000558958 C7orf61Q8IZ16 206 aa19.57■□□□□ 0.72
CLPX-203ENST00000558958 OR5B17Q8NGF7 314 aa19.57■□□□□ 0.72
CLPX-203ENST00000558958 FAM84AQ96KN4 292 aa19.57■□□□□ 0.72
CLPX-203ENST00000558958 CXCL16Q9H2A7 254 aa19.57■□□□□ 0.72
CLPX-203ENST00000558958 CNTN3Q9P232 1028 aa19.57■□□□□ 0.72
CLPX-203ENST00000558958 PRKAG2Q9UGJ0 569 aa19.57■□□□□ 0.72
CLPX-203ENST00000558958 ANK1P16157 1881 aa19.56■□□□□ 0.72
CLPX-203ENST00000558958 EOMESO95936 686 aa19.56■□□□□ 0.72
CLPX-203ENST00000558958 C4BPAP04003 597 aaKnown RBP19.56■□□□□ 0.72
CLPX-203ENST00000558958 NFICP08651 508 aa19.56■□□□□ 0.72
CLPX-203ENST00000558958 SYCP1Q15431 976 aa19.56■□□□□ 0.72
CLPX-203ENST00000558958 DUOXA2Q1HG44 320 aa19.56■□□□□ 0.72
CLPX-203ENST00000558958 ZACNQ401N2 412 aa19.56■□□□□ 0.72
CLPX-203ENST00000558958 JADE1Q6IE81 842 aa19.56■□□□□ 0.72
CLPX-203ENST00000558958 GBP6Q6ZN66 633 aa19.56■□□□□ 0.72
CLPX-203ENST00000558958 AGMOQ6ZNB7 445 aa19.56■□□□□ 0.72
CLPX-203ENST00000558958 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.56■□□□□ 0.72
CLPX-203ENST00000558958 NT5DC4Q86YG4 428 aa19.56■□□□□ 0.72
CLPX-203ENST00000558958 LPPQ93052 612 aa19.56■□□□□ 0.72
CLPX-203ENST00000558958 PGBD4Q96DM1 585 aa19.56■□□□□ 0.72
CLPX-203ENST00000558958 KLK14Q9P0G3 267 aa19.56■□□□□ 0.72
CLPX-203ENST00000558958 SIK3Q9Y2K2 1263 aa19.56■□□□□ 0.72
CLPX-203ENST00000558958 GIT1Q9Y2X7 761 aa19.56■□□□□ 0.72
CLPX-203ENST00000558958 DERAQ9Y315 318 aa19.56■□□□□ 0.72
CLPX-203ENST00000558958 C2CD2Q9Y426 696 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms