RNA–Protein interactions for RNA: ENST00000558952.1

CRNDE-205, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 4

Gene CRNDE, Length 600 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-205ENST00000558952 MUTYHQ9UIF7 546 aa23.54■■□□□ 1.36
CRNDE-205ENST00000558952 NR2E1Q9Y466 385 aa23.54■■□□□ 1.36
CRNDE-205ENST00000558952 SRPRBQ9Y5M8 271 aaKnown RBP23.54■■□□□ 1.36
CRNDE-205ENST00000558952 FAM86C2PA6NEL3 165 aa23.53■■□□□ 1.36
CRNDE-205ENST00000558952 TEX28O15482 410 aa23.53■■□□□ 1.36
CRNDE-205ENST00000558952 TBCAO75347 108 aaKnown RBP23.53■■□□□ 1.36
CRNDE-205ENST00000558952 TOM1L1O75674 476 aa23.53■■□□□ 1.36
CRNDE-205ENST00000558952 KIF4AO95239 1232 aa23.53■■□□□ 1.36
CRNDE-205ENST00000558952 SCP2P22307 547 aa23.53■■□□□ 1.36
CRNDE-205ENST00000558952 PROZP22891 400 aa23.53■■□□□ 1.36
CRNDE-205ENST00000558952 MATR3P43243 847 aaKnown RBP eCLIP23.53■■□□□ 1.36
CRNDE-205ENST00000558952 NCKAP1LP55160 1127 aa23.53■■□□□ 1.36
CRNDE-205ENST00000558952 ELAVL2Q12926 359 aaKnown RBP23.53■■□□□ 1.36
CRNDE-205ENST00000558952 NAB2Q15742 525 aa23.53■■□□□ 1.36
CRNDE-205ENST00000558952 SPECC1Q5M775 1068 aa23.53■■□□□ 1.36
CRNDE-205ENST00000558952 ZPBP2Q6X784 338 aa23.53■■□□□ 1.36
CRNDE-205ENST00000558952 GPR65Q8IYL9 337 aa23.53■■□□□ 1.36
CRNDE-205ENST00000558952 MYCT1Q8N699 235 aa23.53■■□□□ 1.36
CRNDE-205ENST00000558952 CEP120Q8N960 986 aa23.53■■□□□ 1.36
CRNDE-205ENST00000558952 RIN2Q8WYP3 895 aaPredicted RBP23.53■■□□□ 1.36
CRNDE-205ENST00000558952 EPSTI1Q96J88 318 aa23.53■■□□□ 1.36
CRNDE-205ENST00000558952 B3GALT6Q96L58 329 aa23.53■■□□□ 1.36
CRNDE-205ENST00000558952 ACAP3Q96P50 834 aa23.53■■□□□ 1.36
CRNDE-205ENST00000558952 LRFN3Q9BTN0 628 aa23.53■■□□□ 1.36
CRNDE-205ENST00000558952 CXCL16Q9H2A7 254 aa23.53■■□□□ 1.36
CRNDE-205ENST00000558952 ZHX3Q9H4I2 956 aa23.53■■□□□ 1.36
CRNDE-205ENST00000558952 PARVGQ9HBI0 331 aa23.53■■□□□ 1.36
CRNDE-205ENST00000558952 TSHZ2Q9NRE2 1034 aa23.53■■□□□ 1.36
CRNDE-205ENST00000558952 FBXO2Q9UK22 296 aaPredicted RBP23.53■■□□□ 1.36
CRNDE-205ENST00000558952 BRD1O95696 1058 aa23.52■■□□□ 1.36
CRNDE-205ENST00000558952 GLUD1P00367 558 aa23.52■■□□□ 1.36
CRNDE-205ENST00000558952 NOLC1Q14978 699 aaKnown RBP eCLIP23.52■■□□□ 1.36
CRNDE-205ENST00000558952 HERC4Q5GLZ8 1057 aaPredicted RBP23.52■■□□□ 1.36
CRNDE-205ENST00000558952 TMC5Q6UXY8 1006 aa23.52■■□□□ 1.36
CRNDE-205ENST00000558952 HAUS6Q7Z4H7 955 aa23.52■■□□□ 1.36
CRNDE-205ENST00000558952 UROC1Q96N76 676 aa23.52■■□□□ 1.36
CRNDE-205ENST00000558952 PPP1R10Q96QC0 940 aaKnown RBP23.52■■□□□ 1.36
CRNDE-205ENST00000558952 POMKQ9H5K3 350 aa23.52■■□□□ 1.36
CRNDE-205ENST00000558952 SLC38A7Q9NVC3 462 aa23.52■■□□□ 1.36
CRNDE-205ENST00000558952 CDH22Q9UJ99 828 aa23.52■■□□□ 1.36
CRNDE-205ENST00000558952 K7ENM7 598 aa23.51■■□□□ 1.35
CRNDE-205ENST00000558952 CLDN3O15551 220 aa23.51■■□□□ 1.35
CRNDE-205ENST00000558952 WEE2P0C1S8 567 aa23.51■■□□□ 1.35
CRNDE-205ENST00000558952 SP100P23497 879 aaPredicted RBP23.51■■□□□ 1.35
CRNDE-205ENST00000558952 DDIT3P35638 169 aa23.51■■□□□ 1.35
CRNDE-205ENST00000558952 FAM171A1Q5VUB5 890 aa23.51■■□□□ 1.35
CRNDE-205ENST00000558952 CEP57Q86XR8 500 aa23.51■■□□□ 1.35
CRNDE-205ENST00000558952 LRRC15Q8TF66 581 aa23.51■■□□□ 1.35
CRNDE-205ENST00000558952 USP28Q96RU2 1077 aa23.51■■□□□ 1.35
CRNDE-205ENST00000558952 TTPALQ9BTX7 342 aa23.51■■□□□ 1.35
CRNDE-205ENST00000558952 MAN1C1Q9NR34 630 aa23.51■■□□□ 1.35
CRNDE-205ENST00000558952 FNIP2Q9P278 1114 aa23.51■■□□□ 1.35
CRNDE-205ENST00000558952 STK17AQ9UEE5 414 aa23.51■■□□□ 1.35
CRNDE-205ENST00000558952 SMIM28A0A1B0GU29 152 aa23.5■■□□□ 1.35
CRNDE-205ENST00000558952 ABCD1P33897 745 aa23.5■■□□□ 1.35
CRNDE-205ENST00000558952 RRAGBQ5VZM2 374 aa23.5■■□□□ 1.35
CRNDE-205ENST00000558952 KANK3Q6NY19 840 aa23.5■■□□□ 1.35
CRNDE-205ENST00000558952 USP49Q70CQ1 688 aa23.5■■□□□ 1.35
CRNDE-205ENST00000558952 KRI1Q8N9T8 703 aaKnown RBP23.5■■□□□ 1.35
CRNDE-205ENST00000558952 ZBTB45Q96K62 511 aaPredicted RBP23.5■■□□□ 1.35
CRNDE-205ENST00000558952 SNX27Q96L92 541 aa23.5■■□□□ 1.35
CRNDE-205ENST00000558952 CLIC6Q96NY7 704 aa23.5■■□□□ 1.35
CRNDE-205ENST00000558952 C11orf16Q9NQ32 467 aa23.5■■□□□ 1.35
CRNDE-205ENST00000558952 PRR33A8MZF0 331 aa23.49■■□□□ 1.35
CRNDE-205ENST00000558952 ABLIM1O14639 778 aa23.49■■□□□ 1.35
CRNDE-205ENST00000558952 TRAK2O60296 914 aa23.49■■□□□ 1.35
CRNDE-205ENST00000558952 B3GAT3O94766 335 aa23.49■■□□□ 1.35
CRNDE-205ENST00000558952 PDIA4P13667 645 aaKnown RBP23.49■■□□□ 1.35
CRNDE-205ENST00000558952 LIG4P49917 911 aa23.49■■□□□ 1.35
CRNDE-205ENST00000558952 CLCNKBP51801 687 aa23.49■■□□□ 1.35
CRNDE-205ENST00000558952 ZNF131P52739 623 aa23.49■■□□□ 1.35
CRNDE-205ENST00000558952 SLC39A14Q15043 492 aa23.49■■□□□ 1.35
CRNDE-205ENST00000558952 STK38Q15208 465 aa23.49■■□□□ 1.35
CRNDE-205ENST00000558952 XKR4Q5GH76 650 aa23.49■■□□□ 1.35
CRNDE-205ENST00000558952 RTP2Q5QGT7 225 aa23.49■■□□□ 1.35
CRNDE-205ENST00000558952 PDXDC1Q6P996 788 aa23.49■■□□□ 1.35
CRNDE-205ENST00000558952 DCLRE1AQ6PJP8 1040 aa23.49■■□□□ 1.35
CRNDE-205ENST00000558952 GPR149Q86SP6 731 aa23.49■■□□□ 1.35
CRNDE-205ENST00000558952 PALB2Q86YC2 1186 aa23.49■■□□□ 1.35
CRNDE-205ENST00000558952 GLYCTKQ8IVS8 523 aa23.49■■□□□ 1.35
CRNDE-205ENST00000558952 MORC2Q9Y6X9 1032 aaPredicted RBP23.49■■□□□ 1.35
CRNDE-205ENST00000558952 MYH11P35749 1972 aa23.49■■□□□ 1.35
CRNDE-205ENST00000558952 TMEM189-UBE2V1I3L0A0 370 aa23.48■■□□□ 1.35
CRNDE-205ENST00000558952 TRAPPC3O43617 180 aa23.48■■□□□ 1.35
CRNDE-205ENST00000558952 C1RP00736 705 aa23.48■■□□□ 1.35
CRNDE-205ENST00000558952 MCL1Q07820 350 aa23.48■■□□□ 1.35
CRNDE-205ENST00000558952 PRSS55Q6UWB4 352 aaPredicted RBP23.48■■□□□ 1.35
CRNDE-205ENST00000558952 ALKAL1Q6UXT8 129 aa23.48■■□□□ 1.35
CRNDE-205ENST00000558952 C15orf39Q6ZRI6 1047 aa23.48■■□□□ 1.35
CRNDE-205ENST00000558952 HDAC7Q8WUI4 952 aa23.48■■□□□ 1.35
CRNDE-205ENST00000558952 KCNN1Q92952 543 aa23.48■■□□□ 1.35
CRNDE-205ENST00000558952 DDX27Q96GQ7 796 aaKnown RBP23.48■■□□□ 1.35
CRNDE-205ENST00000558952 ZNF396Q96N95 335 aaPredicted RBP23.48■■□□□ 1.35
CRNDE-205ENST00000558952 GOLGA2P5Q9HBQ8 144 aa23.48■■□□□ 1.35
CRNDE-205ENST00000558952 TBX20Q9UMR3 447 aa23.48■■□□□ 1.35
CRNDE-205ENST00000558952 HNRNPDLO14979 420 aaKnown RBP23.47■■□□□ 1.35
CRNDE-205ENST00000558952 KCNE1P15382 129 aa23.47■■□□□ 1.35
CRNDE-205ENST00000558952 RPL17P18621 184 aaKnown RBP23.47■■□□□ 1.35
CRNDE-205ENST00000558952 PSMD5Q16401 504 aa23.47■■□□□ 1.35
CRNDE-205ENST00000558952 UPP1Q16831 310 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms