RNA–Protein interactions for RNA: ENST00000558890.5

LRRC28-211, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-211ENST00000558890 POLR3FQ9H1D9 316 aaPredicted RBP8.34□□□□□ -1.07
LRRC28-211ENST00000558890 NUCKS1Q9H1E3 243 aaKnown RBP8.34□□□□□ -1.07
LRRC28-211ENST00000558890 MMRN2Q9H8L6 949 aa8.34□□□□□ -1.07
LRRC28-211ENST00000558890 AGO3Q9H9G7 860 aaKnown RBP8.34□□□□□ -1.07
LRRC28-211ENST00000558890 LUC7LQ9NQ29 371 aaKnown RBP8.34□□□□□ -1.07
LRRC28-211ENST00000558890 PRMT7Q9NVM4 692 aaPredicted RBP8.34□□□□□ -1.07
LRRC28-211ENST00000558890 SUCLA2Q9P2R7 463 aaPredicted RBP8.34□□□□□ -1.07
LRRC28-211ENST00000558890 EXOC7Q9UPT5 735 aa8.34□□□□□ -1.07
LRRC28-211ENST00000558890 NOD1Q9Y239 953 aa8.34□□□□□ -1.07
LRRC28-211ENST00000558890 PCDHB13Q9Y5F0 798 aa8.34□□□□□ -1.07
LRRC28-211ENST00000558890 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.34□□□□□ -1.07
LRRC28-211ENST00000558890 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.33□□□□□ -1.08
LRRC28-211ENST00000558890 CTAGE15A4D2H0 777 aa8.33□□□□□ -1.08
LRRC28-211ENST00000558890 RNF225M0QZC1 329 aaPredicted RBP8.33□□□□□ -1.08
LRRC28-211ENST00000558890 CETN3O15182 167 aa8.33□□□□□ -1.08
LRRC28-211ENST00000558890 ATP8B1O43520 1251 aa8.33□□□□□ -1.08
LRRC28-211ENST00000558890 ERLIN1O75477 346 aa8.33□□□□□ -1.08
LRRC28-211ENST00000558890 FGBP02675 491 aa8.33□□□□□ -1.08
LRRC28-211ENST00000558890 TUBBP07437 444 aa8.33□□□□□ -1.08
LRRC28-211ENST00000558890 CTAGE8P0CG41 777 aa8.33□□□□□ -1.08
LRRC28-211ENST00000558890 EIF4BP23588 611 aaKnown RBP8.33□□□□□ -1.08
LRRC28-211ENST00000558890 NPTX2P47972 431 aa8.33□□□□□ -1.08
LRRC28-211ENST00000558890 VAV2P52735 878 aa8.33□□□□□ -1.08
LRRC28-211ENST00000558890 GABPB1Q06547 395 aaPredicted RBP8.33□□□□□ -1.08
LRRC28-211ENST00000558890 ENPEPQ07075 957 aa8.33□□□□□ -1.08
LRRC28-211ENST00000558890 KIF5AQ12840 1032 aa8.33□□□□□ -1.08
LRRC28-211ENST00000558890 CAPSQ13938 189 aa8.33□□□□□ -1.08
LRRC28-211ENST00000558890 BRD3Q15059 726 aa8.33□□□□□ -1.08
LRRC28-211ENST00000558890 KYAT1Q16773 422 aa8.33□□□□□ -1.08
LRRC28-211ENST00000558890 EDRF1Q3B7T1 1238 aa8.33□□□□□ -1.08
LRRC28-211ENST00000558890 ZCWPW2Q504Y3 356 aa8.33□□□□□ -1.08
LRRC28-211ENST00000558890 FAM102BQ5T8I3 360 aa8.33□□□□□ -1.08
LRRC28-211ENST00000558890 IQCEQ6IPM2 695 aa8.33□□□□□ -1.08
LRRC28-211ENST00000558890 RSRC2Q7L4I2 434 aaKnown RBP8.33□□□□□ -1.08
LRRC28-211ENST00000558890 ZNF720Q7Z2F6 126 aa8.33□□□□□ -1.08
LRRC28-211ENST00000558890 APBB1IPQ7Z5R6 666 aaPredicted RBP8.33□□□□□ -1.08
LRRC28-211ENST00000558890 DEFB128Q7Z7B8 93 aa8.33□□□□□ -1.08
LRRC28-211ENST00000558890 CTAGE6Q86UF2 777 aa8.33□□□□□ -1.08
LRRC28-211ENST00000558890 MAP4K3Q8IVH8 894 aa8.33□□□□□ -1.08
LRRC28-211ENST00000558890 CTAGE4Q8IX94 777 aa8.33□□□□□ -1.08
LRRC28-211ENST00000558890 C12orf56Q8IXR9 622 aa8.33□□□□□ -1.08
LRRC28-211ENST00000558890 RPUSD2Q8IZ73 545 aaKnown RBP8.33□□□□□ -1.08
LRRC28-211ENST00000558890 TMEM161BQ8NDZ6 487 aa8.33□□□□□ -1.08
LRRC28-211ENST00000558890 DBF4BQ8NFT6 615 aa8.33□□□□□ -1.08
LRRC28-211ENST00000558890 PRPF31Q8WWY3 499 aaKnown RBP8.33□□□□□ -1.08
LRRC28-211ENST00000558890 APBB2Q92870 758 aa8.33□□□□□ -1.08
LRRC28-211ENST00000558890 CELF4Q9BZC1 486 aaKnown RBP8.33□□□□□ -1.08
LRRC28-211ENST00000558890 GCOM2Q9BZD3 368 aaPredicted RBP8.33□□□□□ -1.08
LRRC28-211ENST00000558890 CCDC113Q9H0I3 377 aa8.33□□□□□ -1.08
LRRC28-211ENST00000558890 GBP3Q9H0R5 595 aa8.33□□□□□ -1.08
LRRC28-211ENST00000558890 FZD8Q9H461 694 aa8.33□□□□□ -1.08
LRRC28-211ENST00000558890 ZHX3Q9H4I2 956 aa8.33□□□□□ -1.08
LRRC28-211ENST00000558890 NHEJ1Q9H9Q4 299 aaPredicted RBP8.33□□□□□ -1.08
LRRC28-211ENST00000558890 IFT122Q9HBG6 1241 aa8.33□□□□□ -1.08
LRRC28-211ENST00000558890 KMT5AQ9NQR1 393 aa8.33□□□□□ -1.08
LRRC28-211ENST00000558890 CHST12Q9NRB3 414 aa8.33□□□□□ -1.08
LRRC28-211ENST00000558890 GUCA1BQ9UMX6 200 aa8.33□□□□□ -1.08
LRRC28-211ENST00000558890 TRPV2Q9Y5S1 764 aa8.33□□□□□ -1.08
LRRC28-211ENST00000558890 CDY2AQ9Y6F7 541 aa8.33□□□□□ -1.08
LRRC28-211ENST00000558890 TRANK1O15050 2925 aa8.33□□□□□ -1.08
LRRC28-211ENST00000558890 CNTNAP2Q9UHC6 1331 aa8.32□□□□□ -1.08
LRRC28-211ENST00000558890 RALGAPA2Q2PPJ7 1873 aa8.32□□□□□ -1.08
LRRC28-211ENST00000558890 ANO9A1A5B4 782 aa8.32□□□□□ -1.08
LRRC28-211ENST00000558890 GPR182O15218 404 aa8.32□□□□□ -1.08
LRRC28-211ENST00000558890 CALUO43852 315 aaPredicted RBP8.32□□□□□ -1.08
LRRC28-211ENST00000558890 AKR1B10O60218 316 aa8.32□□□□□ -1.08
LRRC28-211ENST00000558890 DARSP14868 501 aaKnown RBP8.32□□□□□ -1.08
LRRC28-211ENST00000558890 HNRNPH3P31942 346 aaKnown RBP8.32□□□□□ -1.08
LRRC28-211ENST00000558890 KLK7P49862 253 aa8.32□□□□□ -1.08
LRRC28-211ENST00000558890 CLCN3P51790 818 aa8.32□□□□□ -1.08
LRRC28-211ENST00000558890 PEX3P56589 373 aa8.32□□□□□ -1.08
LRRC28-211ENST00000558890 MAPK6Q16659 721 aa8.32□□□□□ -1.08
LRRC28-211ENST00000558890 PDXDC1Q6P996 788 aa8.32□□□□□ -1.08
LRRC28-211ENST00000558890 PSRC1Q6PGN9 363 aaPredicted RBP8.32□□□□□ -1.08
LRRC28-211ENST00000558890 TSHZ1Q6ZSZ6 1077 aa8.32□□□□□ -1.08
LRRC28-211ENST00000558890 OTOP2Q7RTS6 562 aa8.32□□□□□ -1.08
LRRC28-211ENST00000558890 TRMT1LQ7Z2T5 733 aaKnown RBP8.32□□□□□ -1.08
LRRC28-211ENST00000558890 HAUS6Q7Z4H7 955 aa8.32□□□□□ -1.08
LRRC28-211ENST00000558890 SFR1Q86XK3 245 aa8.32□□□□□ -1.08
LRRC28-211ENST00000558890 NELFCDQ8IXH7 590 aa8.32□□□□□ -1.08
LRRC28-211ENST00000558890 LRRC71Q8N4P6 559 aa8.32□□□□□ -1.08
LRRC28-211ENST00000558890 MYCT1Q8N699 235 aa8.32□□□□□ -1.08
LRRC28-211ENST00000558890 METTL13Q8N6R0 699 aa8.32□□□□□ -1.08
LRRC28-211ENST00000558890 DEPTORQ8TB45 409 aa8.32□□□□□ -1.08
LRRC28-211ENST00000558890 LINC01599Q8WXQ3 324 aa8.32□□□□□ -1.08
LRRC28-211ENST00000558890 SECISBP2LQ93073 1101 aaKnown RBP8.32□□□□□ -1.08
LRRC28-211ENST00000558890 RNF25Q96BH1 459 aaPredicted RBP8.32□□□□□ -1.08
LRRC28-211ENST00000558890 RPGRIP1Q96KN7 1286 aa8.32□□□□□ -1.08
LRRC28-211ENST00000558890 ALS2CR12Q96Q35 445 aa8.32□□□□□ -1.08
LRRC28-211ENST00000558890 PHF12Q96QT6 1004 aa8.32□□□□□ -1.08
LRRC28-211ENST00000558890 FTHL17Q9BXU8 183 aa8.32□□□□□ -1.08
LRRC28-211ENST00000558890 IRX2Q9BZI1 471 aaPredicted RBP8.32□□□□□ -1.08
LRRC28-211ENST00000558890 FAM49AQ9H0Q0 323 aaPredicted RBP8.32□□□□□ -1.08
LRRC28-211ENST00000558890 SUGCTQ9HAC7 445 aa8.32□□□□□ -1.08
LRRC28-211ENST00000558890 ARFGAP3Q9NP61 516 aa8.32□□□□□ -1.08
LRRC28-211ENST00000558890 FAM207AQ9NSI2 230 aaPredicted RBP8.32□□□□□ -1.08
LRRC28-211ENST00000558890 AGPAT5Q9NUQ2 364 aa8.32□□□□□ -1.08
LRRC28-211ENST00000558890 TBC1D7Q9P0N9 293 aa8.32□□□□□ -1.08
LRRC28-211ENST00000558890 CEP72Q9P209 647 aa8.32□□□□□ -1.08
LRRC28-211ENST00000558890 PUF60Q9UHX1 559 aaKnown RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms