RNA–Protein interactions for RNA: ENST00000558845.1

HMG20A-206, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 644 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-206ENST00000558845 RFX1P22670 979 aa12.14□□□□□ -0.47
HMG20A-206ENST00000558845 MATR3P43243 847 aaKnown RBP eCLIP12.14□□□□□ -0.47
HMG20A-206ENST00000558845 ACOT2P49753 483 aa12.14□□□□□ -0.47
HMG20A-206ENST00000558845 PPP3CAQ08209 521 aa12.14□□□□□ -0.47
HMG20A-206ENST00000558845 CETN1Q12798 172 aa12.14□□□□□ -0.47
HMG20A-206ENST00000558845 EXOC3L4Q17RC7 722 aa12.14□□□□□ -0.47
HMG20A-206ENST00000558845 FBXO47Q5MNV8 452 aa12.14□□□□□ -0.47
HMG20A-206ENST00000558845 KRT39Q6A163 491 aa12.14□□□□□ -0.47
HMG20A-206ENST00000558845 DPY19L2P1Q6NXN4 242 aa12.14□□□□□ -0.47
HMG20A-206ENST00000558845 TRAF7Q6Q0C0 670 aa12.14□□□□□ -0.47
HMG20A-206ENST00000558845 CCDC186Q7Z3E2 898 aa12.14□□□□□ -0.47
HMG20A-206ENST00000558845 PPFIBP1Q86W92 1011 aa12.14□□□□□ -0.47
HMG20A-206ENST00000558845 NT5DC4Q86YG4 428 aa12.14□□□□□ -0.47
HMG20A-206ENST00000558845 WDR49Q8IV35 697 aa12.14□□□□□ -0.47
HMG20A-206ENST00000558845 CD302Q8IX05 232 aa12.14□□□□□ -0.47
HMG20A-206ENST00000558845 PANX2Q96RD6 677 aa12.14□□□□□ -0.47
HMG20A-206ENST00000558845 PPP1R16BQ96T49 567 aa12.14□□□□□ -0.47
HMG20A-206ENST00000558845 CGRRF1Q99675 332 aa12.14□□□□□ -0.47
HMG20A-206ENST00000558845 TMEM117Q9H0C3 514 aa12.14□□□□□ -0.47
HMG20A-206ENST00000558845 ASB7Q9H672 318 aa12.14□□□□□ -0.47
HMG20A-206ENST00000558845 PLEKHA5Q9HAU0 1116 aa12.14□□□□□ -0.47
HMG20A-206ENST00000558845 MYO6Q9UM54 1294 aa12.14□□□□□ -0.47
HMG20A-206ENST00000558845 AKR1B15C9JRZ8 316 aaPredicted RBP12.13□□□□□ -0.47
HMG20A-206ENST00000558845 MFAP3LO75121 409 aa12.13□□□□□ -0.47
HMG20A-206ENST00000558845 ZC3H11AO75152 810 aaKnown RBP eCLIP12.13□□□□□ -0.47
HMG20A-206ENST00000558845 CSDE1O75534 798 aaKnown RBP12.13□□□□□ -0.47
HMG20A-206ENST00000558845 RPS6KA5O75582 802 aa12.13□□□□□ -0.47
HMG20A-206ENST00000558845 TRIM49P0CI25 452 aa12.13□□□□□ -0.47
HMG20A-206ENST00000558845 TRIM49CP0CI26 452 aa12.13□□□□□ -0.47
HMG20A-206ENST00000558845 CKBP12277 381 aa12.13□□□□□ -0.47
HMG20A-206ENST00000558845 PON1P27169 355 aa12.13□□□□□ -0.47
HMG20A-206ENST00000558845 THPOP40225 353 aa12.13□□□□□ -0.47
HMG20A-206ENST00000558845 MXI1P50539 228 aa12.13□□□□□ -0.47
HMG20A-206ENST00000558845 DLG4P78352 724 aa12.13□□□□□ -0.47
HMG20A-206ENST00000558845 ZBED6P86452 979 aa12.13□□□□□ -0.47
HMG20A-206ENST00000558845 MYL7Q01449 175 aa12.13□□□□□ -0.47
HMG20A-206ENST00000558845 ENOX2Q16206 610 aaKnown RBP12.13□□□□□ -0.47
HMG20A-206ENST00000558845 ZACNQ401N2 412 aa12.13□□□□□ -0.47
HMG20A-206ENST00000558845 CBWD6Q4V339 395 aa12.13□□□□□ -0.47
HMG20A-206ENST00000558845 EPC2Q52LR7 807 aa12.13□□□□□ -0.47
HMG20A-206ENST00000558845 CBWD3Q5JTY5 395 aa12.13□□□□□ -0.47
HMG20A-206ENST00000558845 CBWD5Q5RIA9 395 aa12.13□□□□□ -0.47
HMG20A-206ENST00000558845 ZBTB41Q5SVQ8 909 aa12.13□□□□□ -0.47
HMG20A-206ENST00000558845 ZBTB33Q86T24 672 aa12.13□□□□□ -0.47
HMG20A-206ENST00000558845 LRRC8AQ8IWT6 810 aa12.13□□□□□ -0.47
HMG20A-206ENST00000558845 TC2NQ8N9U0 490 aa12.13□□□□□ -0.47
HMG20A-206ENST00000558845 CCDC112Q8NEF3 446 aa12.13□□□□□ -0.47
HMG20A-206ENST00000558845 LMO3Q8TAP4 145 aa12.13□□□□□ -0.47
HMG20A-206ENST00000558845 CPB2Q96IY4 423 aa12.13□□□□□ -0.47
HMG20A-206ENST00000558845 FNBP1Q96RU3 617 aa12.13□□□□□ -0.47
HMG20A-206ENST00000558845 NUCKS1Q9H1E3 243 aaKnown RBP12.13□□□□□ -0.47
HMG20A-206ENST00000558845 TMX1Q9H3N1 280 aa12.13□□□□□ -0.47
HMG20A-206ENST00000558845 RPF1Q9H9Y2 349 aaKnown RBP12.13□□□□□ -0.47
HMG20A-206ENST00000558845 ERVK-5Q9HDB9 667 aa12.13□□□□□ -0.47
HMG20A-206ENST00000558845 CEP72Q9P209 647 aa12.13□□□□□ -0.47
HMG20A-206ENST00000558845 GINS2Q9Y248 185 aa12.13□□□□□ -0.47
HMG20A-206ENST00000558845 NOC2LQ9Y3T9 749 aaKnown RBP12.13□□□□□ -0.47
HMG20A-206ENST00000558845 HTTP42858 3142 aa12.13□□□□□ -0.47
HMG20A-206ENST00000558845 TTC26A0AVF1 554 aa12.12□□□□□ -0.47
HMG20A-206ENST00000558845 TLR3O15455 904 aaKnown RBP12.12□□□□□ -0.47
HMG20A-206ENST00000558845 NOL4O94818 638 aa12.12□□□□□ -0.47
HMG20A-206ENST00000558845 PARNO95453 639 aaKnown RBP12.12□□□□□ -0.47
HMG20A-206ENST00000558845 C4BPAP04003 597 aaKnown RBP12.12□□□□□ -0.47
HMG20A-206ENST00000558845 STAG3L1P0CL83 205 aa12.12□□□□□ -0.47
HMG20A-206ENST00000558845 TRIM21P19474 475 aaKnown RBP12.12□□□□□ -0.47
HMG20A-206ENST00000558845 HNRNPH3P31942 346 aaKnown RBP12.12□□□□□ -0.47
HMG20A-206ENST00000558845 TNFSF9P41273 254 aa12.12□□□□□ -0.47
HMG20A-206ENST00000558845 FXR1P51114 621 aaKnown RBP eCLIP12.12□□□□□ -0.47
HMG20A-206ENST00000558845 BFSP2Q13515 415 aa12.12□□□□□ -0.47
HMG20A-206ENST00000558845 UBXN11Q5T124 520 aa12.12□□□□□ -0.47
HMG20A-206ENST00000558845 TRIM65Q6PJ69 517 aa12.12□□□□□ -0.47
HMG20A-206ENST00000558845 SLC39A5Q6ZMH5 540 aa12.12□□□□□ -0.47
HMG20A-206ENST00000558845 SV2AQ7L0J3 742 aa12.12□□□□□ -0.47
HMG20A-206ENST00000558845 EHBP1Q8NDI1 1231 aa12.12□□□□□ -0.47
HMG20A-206ENST00000558845 NEK11Q8NG66 645 aa12.12□□□□□ -0.47
HMG20A-206ENST00000558845 SYN2Q92777 582 aaPredicted RBP12.12□□□□□ -0.47
HMG20A-206ENST00000558845 TRIM44Q96DX7 344 aaPredicted RBP12.12□□□□□ -0.47
HMG20A-206ENST00000558845 FAM81BQ96LP2 452 aa12.12□□□□□ -0.47
HMG20A-206ENST00000558845 ACAP3Q96P50 834 aa12.12□□□□□ -0.47
HMG20A-206ENST00000558845 DNAJC7Q99615 494 aa12.12□□□□□ -0.47
HMG20A-206ENST00000558845 CCDC94Q9BW85 323 aaPredicted RBP12.12□□□□□ -0.47
HMG20A-206ENST00000558845 TRPV6Q9H1D0 765 aa12.12□□□□□ -0.47
HMG20A-206ENST00000558845 GANQ9H2C0 597 aa12.12□□□□□ -0.47
HMG20A-206ENST00000558845 MMRN2Q9H8L6 949 aa12.12□□□□□ -0.47
HMG20A-206ENST00000558845 PDE11AQ9HCR9 933 aa12.12□□□□□ -0.47
HMG20A-206ENST00000558845 SIX2Q9NPC8 291 aa12.12□□□□□ -0.47
HMG20A-206ENST00000558845 GCNT4Q9P109 453 aa12.12□□□□□ -0.47
HMG20A-206ENST00000558845 ST3GAL5Q9UNP4 418 aa12.12□□□□□ -0.47
HMG20A-206ENST00000558845 PIN4Q9Y237 131 aaKnown RBP12.12□□□□□ -0.47
HMG20A-206ENST00000558845 DERAQ9Y315 318 aa12.12□□□□□ -0.47
HMG20A-206ENST00000558845 LUC7L2Q9Y383 392 aaKnown RBP12.12□□□□□ -0.47
HMG20A-206ENST00000558845 C2CD2Q9Y426 696 aa12.12□□□□□ -0.47
HMG20A-206ENST00000558845 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.12□□□□□ -0.47
HMG20A-206ENST00000558845 RALGAPA2Q2PPJ7 1873 aa12.11□□□□□ -0.47
HMG20A-206ENST00000558845 ZNF623O75123 536 aa12.11□□□□□ -0.47
HMG20A-206ENST00000558845 TFRCP02786 760 aaKnown RBP12.11□□□□□ -0.47
HMG20A-206ENST00000558845 SELPP16109 830 aa12.11□□□□□ -0.47
HMG20A-206ENST00000558845 FGFR4P22455 802 aa12.11□□□□□ -0.47
HMG20A-206ENST00000558845 CASP14P31944 242 aa12.11□□□□□ -0.47
HMG20A-206ENST00000558845 KCNJ6P48051 423 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms