RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 FBXO2Q9UK22 296 aaPredicted RBP13.73□□□□□ -0.21
SMAD3-208ENST00000558827 RBM19Q9Y4C8 960 aaKnown RBP13.73□□□□□ -0.21
SMAD3-208ENST00000558827 PLXNA3P51805 1871 aa13.72□□□□□ -0.21
SMAD3-208ENST00000558827 SMIM28A0A1B0GU29 152 aa13.72□□□□□ -0.21
SMAD3-208ENST00000558827 FSD2A1L4K1 749 aa13.72□□□□□ -0.21
SMAD3-208ENST00000558827 CARNS1A5YM72 827 aa13.72□□□□□ -0.21
SMAD3-208ENST00000558827 STX6O43752 255 aa13.72□□□□□ -0.21
SMAD3-208ENST00000558827 RFPL2O75678 378 aa13.72□□□□□ -0.21
SMAD3-208ENST00000558827 EFEMP2O95967 443 aa13.72□□□□□ -0.21
SMAD3-208ENST00000558827 BMP15O95972 392 aa13.72□□□□□ -0.21
SMAD3-208ENST00000558827 MAPTP10636 758 aaKnown RBP13.72□□□□□ -0.21
SMAD3-208ENST00000558827 NMT1P30419 496 aaKnown RBP13.72□□□□□ -0.21
SMAD3-208ENST00000558827 GRM5P41594 1212 aa13.72□□□□□ -0.21
SMAD3-208ENST00000558827 BRCC3P46736 316 aa13.72□□□□□ -0.21
SMAD3-208ENST00000558827 CLCNKBP51801 687 aa13.72□□□□□ -0.21
SMAD3-208ENST00000558827 SMTNP53814 917 aa13.72□□□□□ -0.21
SMAD3-208ENST00000558827 DSG1Q02413 1049 aa13.72□□□□□ -0.21
SMAD3-208ENST00000558827 SOX4Q06945 474 aaPredicted RBP13.72□□□□□ -0.21
SMAD3-208ENST00000558827 NAB2Q15742 525 aa13.72□□□□□ -0.21
SMAD3-208ENST00000558827 USP41Q3LFD5 358 aa13.72□□□□□ -0.21
SMAD3-208ENST00000558827 MPZL3Q6UWV2 235 aa13.72□□□□□ -0.21
SMAD3-208ENST00000558827 RNF168Q8IYW5 571 aaPredicted RBP13.72□□□□□ -0.21
SMAD3-208ENST00000558827 C18orf25Q96B23 403 aaPredicted RBP13.72□□□□□ -0.21
SMAD3-208ENST00000558827 INTS4Q96HW7 963 aaKnown RBP13.72□□□□□ -0.21
SMAD3-208ENST00000558827 ZMAT2Q96NC0 199 aaKnown RBP13.72□□□□□ -0.21
SMAD3-208ENST00000558827 MAN1C1Q9NR34 630 aa13.72□□□□□ -0.21
SMAD3-208ENST00000558827 TRIOO75962 3097 aa13.71□□□□□ -0.21
SMAD3-208ENST00000558827 C2CD4DB7Z1M9 353 aa13.71□□□□□ -0.21
SMAD3-208ENST00000558827 K7ENM7 598 aa13.71□□□□□ -0.21
SMAD3-208ENST00000558827 ABLIM1O14639 778 aa13.71□□□□□ -0.21
SMAD3-208ENST00000558827 MEFVO15553 781 aaPredicted RBP13.71□□□□□ -0.21
SMAD3-208ENST00000558827 ADAM12O43184 909 aa13.71□□□□□ -0.21
SMAD3-208ENST00000558827 B3GAT3O94766 335 aa13.71□□□□□ -0.21
SMAD3-208ENST00000558827 ADH1AP07327 375 aa13.71□□□□□ -0.21
SMAD3-208ENST00000558827 YARSP54577 528 aaKnown RBP13.71□□□□□ -0.21
SMAD3-208ENST00000558827 ATAT1Q5SQI0 421 aa13.71□□□□□ -0.21
SMAD3-208ENST00000558827 HAUS6Q7Z4H7 955 aa13.71□□□□□ -0.21
SMAD3-208ENST00000558827 PPFIBP1Q86W92 1011 aa13.71□□□□□ -0.21
SMAD3-208ENST00000558827 HSCBQ8IWL3 235 aa13.71□□□□□ -0.21
SMAD3-208ENST00000558827 ST13P5Q8NFI4 369 aaPredicted RBP13.71□□□□□ -0.21
SMAD3-208ENST00000558827 SPIRE2Q8WWL2 714 aa13.71□□□□□ -0.21
SMAD3-208ENST00000558827 ACAP3Q96P50 834 aa13.71□□□□□ -0.21
SMAD3-208ENST00000558827 PPP1R10Q96QC0 940 aaKnown RBP13.71□□□□□ -0.21
SMAD3-208ENST00000558827 NTPCRQ9BSD7 190 aaKnown RBP13.71□□□□□ -0.21
SMAD3-208ENST00000558827 TIPINQ9BVW5 301 aa13.71□□□□□ -0.21
SMAD3-208ENST00000558827 HAPLN2Q9GZV7 340 aa13.71□□□□□ -0.21
SMAD3-208ENST00000558827 IKZF4Q9H2S9 585 aa13.71□□□□□ -0.21
SMAD3-208ENST00000558827 CHST7Q9NS84 486 aa13.71□□□□□ -0.21
SMAD3-208ENST00000558827 DZANK1Q9NVP4 752 aa13.71□□□□□ -0.21
SMAD3-208ENST00000558827 TBC1D7Q9P0N9 293 aa13.71□□□□□ -0.21
SMAD3-208ENST00000558827 DOCK6Q96HP0 2047 aa13.7□□□□□ -0.22
SMAD3-208ENST00000558827 CCDC195A0A1B0GUA6 201 aa13.7□□□□□ -0.22
SMAD3-208ENST00000558827 GPR37L1O60883 481 aa13.7□□□□□ -0.22
SMAD3-208ENST00000558827 GLUD1P00367 558 aa13.7□□□□□ -0.22
SMAD3-208ENST00000558827 ASGR2P07307 311 aa13.7□□□□□ -0.22
SMAD3-208ENST00000558827 HSP90AA1P07900 732 aaKnown RBP13.7□□□□□ -0.22
SMAD3-208ENST00000558827 MCF2P10911 925 aa13.7□□□□□ -0.22
SMAD3-208ENST00000558827 PROZP22891 400 aa13.7□□□□□ -0.22
SMAD3-208ENST00000558827 MTHFRP42898 656 aa13.7□□□□□ -0.22
SMAD3-208ENST00000558827 ITIH3Q06033 890 aa13.7□□□□□ -0.22
SMAD3-208ENST00000558827 STK38Q15208 465 aa13.7□□□□□ -0.22
SMAD3-208ENST00000558827 ZC2HC1CQ53FD0 456 aaPredicted RBP13.7□□□□□ -0.22
SMAD3-208ENST00000558827 ZBTB41Q5SVQ8 909 aa13.7□□□□□ -0.22
SMAD3-208ENST00000558827 RRAGBQ5VZM2 374 aa13.7□□□□□ -0.22
SMAD3-208ENST00000558827 CD300LGQ6UXG3 332 aa13.7□□□□□ -0.22
SMAD3-208ENST00000558827 APBB1IPQ7Z5R6 666 aaPredicted RBP13.7□□□□□ -0.22
SMAD3-208ENST00000558827 PDILTQ8N807 584 aa13.7□□□□□ -0.22
SMAD3-208ENST00000558827 C3orf58Q8NDZ4 430 aa13.7□□□□□ -0.22
SMAD3-208ENST00000558827 LARP4BQ92615 738 aaKnown RBP13.7□□□□□ -0.22
SMAD3-208ENST00000558827 STAMQ92783 540 aa13.7□□□□□ -0.22
SMAD3-208ENST00000558827 RIPOR3Q96MK2 946 aa13.7□□□□□ -0.22
SMAD3-208ENST00000558827 CCSER1Q9C0I3 900 aa13.7□□□□□ -0.22
SMAD3-208ENST00000558827 SMOC2Q9H3U7 446 aa13.7□□□□□ -0.22
SMAD3-208ENST00000558827 C17orf75Q9HAS0 396 aa13.7□□□□□ -0.22
SMAD3-208ENST00000558827 RXFP1Q9HBX9 757 aa13.7□□□□□ -0.22
SMAD3-208ENST00000558827 LARSQ9P2J5 1176 aaKnown RBP13.7□□□□□ -0.22
SMAD3-208ENST00000558827 DAXXQ9UER7 740 aaPredicted RBP13.7□□□□□ -0.22
SMAD3-208ENST00000558827 LIMD1Q9UGP4 676 aa13.7□□□□□ -0.22
SMAD3-208ENST00000558827 SSX2IPQ9Y2D8 614 aa13.7□□□□□ -0.22
SMAD3-208ENST00000558827 SRPRBQ9Y5M8 271 aaKnown RBP13.7□□□□□ -0.22
SMAD3-208ENST00000558827 TECTAO75443 2155 aa13.7□□□□□ -0.22
SMAD3-208ENST00000558827 SF3B1O75533 1304 aaKnown RBP eCLIP13.69□□□□□ -0.225e-6■■■■■ 142.6
SMAD3-208ENST00000558827 A0A087X0B3 334 aa13.69□□□□□ -0.22
SMAD3-208ENST00000558827 TISP43B9A030 160 aa13.69□□□□□ -0.22
SMAD3-208ENST00000558827 CLDN3O15551 220 aa13.69□□□□□ -0.22
SMAD3-208ENST00000558827 TGM5O43548 720 aa13.69□□□□□ -0.22
SMAD3-208ENST00000558827 TBCAO75347 108 aaKnown RBP13.69□□□□□ -0.22
SMAD3-208ENST00000558827 CXCL8P10145 99 aa13.69□□□□□ -0.22
SMAD3-208ENST00000558827 DDIT3P35638 169 aa13.69□□□□□ -0.22
SMAD3-208ENST00000558827 TNFSF9P41273 254 aa13.69□□□□□ -0.22
SMAD3-208ENST00000558827 LIG4P49917 911 aa13.69□□□□□ -0.22
SMAD3-208ENST00000558827 GUCY2FP51841 1108 aa13.69□□□□□ -0.22
SMAD3-208ENST00000558827 NCKAP1LP55160 1127 aa13.69□□□□□ -0.22
SMAD3-208ENST00000558827 NOLC1Q14978 699 aaKnown RBP eCLIP13.69□□□□□ -0.22
SMAD3-208ENST00000558827 PSMD5Q16401 504 aa13.69□□□□□ -0.22
SMAD3-208ENST00000558827 SLC10A6Q3KNW5 377 aa13.69□□□□□ -0.22
SMAD3-208ENST00000558827 HERC4Q5GLZ8 1057 aaPredicted RBP13.69□□□□□ -0.22
SMAD3-208ENST00000558827 ALKAL1Q6UXT8 129 aa13.69□□□□□ -0.22
SMAD3-208ENST00000558827 GPR149Q86SP6 731 aa13.69□□□□□ -0.22
SMAD3-208ENST00000558827 SNX21Q969T3 373 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms