RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 MX2P20592 715 aa10.91□□□□□ -0.66
SPG11-212ENST00000558790 MAPK1P28482 360 aa10.91□□□□□ -0.66
SPG11-212ENST00000558790 SETQ01105 290 aaPredicted RBP10.91□□□□□ -0.66
SPG11-212ENST00000558790 TMCO4Q5TGY1 634 aa10.91□□□□□ -0.66
SPG11-212ENST00000558790 ZNF746Q6NUN9 644 aaPredicted RBP10.91□□□□□ -0.66
SPG11-212ENST00000558790 SYNE3Q6ZMZ3 975 aa10.91□□□□□ -0.66
SPG11-212ENST00000558790 LINC01465Q8N7H1 131 aa10.91□□□□□ -0.66
SPG11-212ENST00000558790 ZNF668Q96K58 619 aaPredicted RBP10.91□□□□□ -0.66
SPG11-212ENST00000558790 ZNF558Q96NG5 402 aa10.91□□□□□ -0.66
SPG11-212ENST00000558790 ZNF577Q9BSK1 485 aa10.91□□□□□ -0.66
SPG11-212ENST00000558790 SMOC2Q9H3U7 446 aa10.91□□□□□ -0.66
SPG11-212ENST00000558790 POMKQ9H5K3 350 aa10.91□□□□□ -0.66
SPG11-212ENST00000558790 NGRNQ9NPE2 291 aaKnown RBP10.91□□□□□ -0.66
SPG11-212ENST00000558790 FAM13BQ9NYF5 915 aa10.91□□□□□ -0.66
SPG11-212ENST00000558790 AKT3Q9Y243 479 aa10.91□□□□□ -0.66
SPG11-212ENST00000558790 HCFC2Q9Y5Z7 792 aa10.91□□□□□ -0.66
SPG11-212ENST00000558790 DOCK6Q96HP0 2047 aa10.91□□□□□ -0.66
SPG11-212ENST00000558790 C2orf71A6NGG8 1288 aa10.9□□□□□ -0.66
SPG11-212ENST00000558790 C2CD4DB7Z1M9 353 aa10.9□□□□□ -0.66
SPG11-212ENST00000558790 C2CD2LO14523 706 aa10.9□□□□□ -0.66
SPG11-212ENST00000558790 NDUFB5O43674 189 aa10.9□□□□□ -0.66
SPG11-212ENST00000558790 CYP3A4P08684 503 aa10.9□□□□□ -0.66
SPG11-212ENST00000558790 HOXB8P17481 243 aaPredicted RBP10.9□□□□□ -0.66
SPG11-212ENST00000558790 CDC27P30260 824 aa10.9□□□□□ -0.66
SPG11-212ENST00000558790 NLRP11P59045 1033 aaKnown RBP10.9□□□□□ -0.66
SPG11-212ENST00000558790 SMC1AQ14683 1233 aaKnown RBP10.9□□□□□ -0.66
SPG11-212ENST00000558790 C8orf34Q49A92 452 aa10.9□□□□□ -0.66
SPG11-212ENST00000558790 KRT25Q7Z3Z0 450 aa10.9□□□□□ -0.66
SPG11-212ENST00000558790 TMC7Q7Z402 723 aa10.9□□□□□ -0.66
SPG11-212ENST00000558790 ECHDC2Q86YB7 292 aa10.9□□□□□ -0.66
SPG11-212ENST00000558790 SMAP1Q8IYB5 467 aaPredicted RBP10.9□□□□□ -0.66
SPG11-212ENST00000558790 ABI1Q8IZP0 508 aa10.9□□□□□ -0.66
SPG11-212ENST00000558790 SLC39A11Q8N1S5 342 aa10.9□□□□□ -0.66
SPG11-212ENST00000558790 LRRC71Q8N4P6 559 aa10.9□□□□□ -0.66
SPG11-212ENST00000558790 RNF169Q8NCN4 708 aa10.9□□□□□ -0.66
SPG11-212ENST00000558790 KREMEN2Q8NCW0 462 aa10.9□□□□□ -0.66
SPG11-212ENST00000558790 CASP10Q92851 521 aa10.9□□□□□ -0.66
SPG11-212ENST00000558790 RIPOR3Q96MK2 946 aa10.9□□□□□ -0.66
SPG11-212ENST00000558790 MAP7D2Q96T17 732 aa10.9□□□□□ -0.66
SPG11-212ENST00000558790 GLT8D2Q9H1C3 349 aa10.9□□□□□ -0.66
SPG11-212ENST00000558790 ADAMTS10Q9H324 1103 aa10.9□□□□□ -0.66
SPG11-212ENST00000558790 GABBR1Q9UBS5 961 aa10.9□□□□□ -0.66
SPG11-212ENST00000558790 TCEAL9Q9UHQ7 104 aa10.9□□□□□ -0.66
SPG11-212ENST00000558790 PUF60Q9UHX1 559 aaKnown RBP10.9□□□□□ -0.66
SPG11-212ENST00000558790 CEP131Q9UPN4 1083 aa10.9□□□□□ -0.66
SPG11-212ENST00000558790 NR2E1Q9Y466 385 aa10.9□□□□□ -0.66
SPG11-212ENST00000558790 KLF18A0A0U1RQI7 1052 aa10.89□□□□□ -0.67
SPG11-212ENST00000558790 XYLBO75191 536 aa10.89□□□□□ -0.67
SPG11-212ENST00000558790 WFS1O76024 890 aa10.89□□□□□ -0.67
SPG11-212ENST00000558790 PSAPP07602 524 aa10.89□□□□□ -0.67
SPG11-212ENST00000558790 WEE2P0C1S8 567 aa10.89□□□□□ -0.67
SPG11-212ENST00000558790 FGFR4P22455 802 aa10.89□□□□□ -0.67
SPG11-212ENST00000558790 MARSP56192 900 aaKnown RBP10.89□□□□□ -0.67
SPG11-212ENST00000558790 IRX6P78412 446 aaPredicted RBP10.89□□□□□ -0.67
SPG11-212ENST00000558790 EXOSC10Q01780 885 aaKnown RBP10.89□□□□□ -0.67
SPG11-212ENST00000558790 PRKCEQ02156 737 aa10.89□□□□□ -0.67
SPG11-212ENST00000558790 KRT17Q04695 432 aa10.89□□□□□ -0.67
SPG11-212ENST00000558790 SPEM2Q0P670 501 aa10.89□□□□□ -0.67
SPG11-212ENST00000558790 UGCGQ16739 394 aa10.89□□□□□ -0.67
SPG11-212ENST00000558790 PFKFB3Q16875 520 aaPredicted RBP10.89□□□□□ -0.67
SPG11-212ENST00000558790 ADCK5Q3MIX3 580 aa10.89□□□□□ -0.67
SPG11-212ENST00000558790 PRR16Q569H4 304 aa10.89□□□□□ -0.67
SPG11-212ENST00000558790 EFCAB12Q6NXP0 572 aa10.89□□□□□ -0.67
SPG11-212ENST00000558790 REXO1Q8N1G1 1221 aaKnown RBP10.89□□□□□ -0.67
SPG11-212ENST00000558790 LENG9Q96B70 501 aa10.89□□□□□ -0.67
SPG11-212ENST00000558790 FAM167AQ96KS9 214 aa10.89□□□□□ -0.67
SPG11-212ENST00000558790 NECTIN4Q96NY8 510 aa10.89□□□□□ -0.67
SPG11-212ENST00000558790 TBC1D22BQ9NU19 505 aa10.89□□□□□ -0.67
SPG11-212ENST00000558790 SPG21Q9NZD8 308 aa10.89□□□□□ -0.67
SPG11-212ENST00000558790 DCTN4Q9UJW0 460 aa10.89□□□□□ -0.67
SPG11-212ENST00000558790 SORCS3Q9UPU3 1222 aa10.89□□□□□ -0.67
SPG11-212ENST00000558790 MIA3Q5JRA6 1907 aa10.89□□□□□ -0.67
SPG11-212ENST00000558790 MYH15Q9Y2K3 1946 aa10.89□□□□□ -0.67
SPG11-212ENST00000558790 ESYT2A0FGR8 921 aa10.88□□□□□ -0.67
SPG11-212ENST00000558790 MAGEB2O15479 319 aa10.88□□□□□ -0.67
SPG11-212ENST00000558790 ZNF862O60290 1169 aa10.88□□□□□ -0.67
SPG11-212ENST00000558790 CLASP2O75122 1294 aaKnown RBP10.88□□□□□ -0.67
SPG11-212ENST00000558790 ASGR2P07307 311 aa10.88□□□□□ -0.67
SPG11-212ENST00000558790 BMP4P12644 408 aa10.88□□□□□ -0.67
SPG11-212ENST00000558790 DARSP14868 501 aaKnown RBP10.88□□□□□ -0.67
SPG11-212ENST00000558790 ZSCAN20P17040 1043 aaPredicted RBP10.88□□□□□ -0.67
SPG11-212ENST00000558790 EIF4BP23588 611 aaKnown RBP10.88□□□□□ -0.67
SPG11-212ENST00000558790 CA8P35219 290 aa10.88□□□□□ -0.67
SPG11-212ENST00000558790 METAP2P50579 478 aaKnown RBP eCLIP10.88□□□□□ -0.67
SPG11-212ENST00000558790 GPC3P51654 580 aa10.88□□□□□ -0.67
SPG11-212ENST00000558790 ITIH3Q06033 890 aa10.88□□□□□ -0.67
SPG11-212ENST00000558790 RARS2Q5T160 578 aaKnown RBP10.88□□□□□ -0.67
SPG11-212ENST00000558790 CES5AQ6NT32 575 aa10.88□□□□□ -0.67
SPG11-212ENST00000558790 TMEM173Q86WV6 379 aaPredicted RBP10.88□□□□□ -0.67
SPG11-212ENST00000558790 UBALD2Q8IYN6 164 aa10.88□□□□□ -0.67
SPG11-212ENST00000558790 MRPL43Q8N983 215 aaKnown RBP10.88□□□□□ -0.67
SPG11-212ENST00000558790 FEZF2Q8TBJ5 459 aa10.88□□□□□ -0.67
SPG11-212ENST00000558790 SCLT1Q96NL6 688 aa10.88□□□□□ -0.67
SPG11-212ENST00000558790 GSX2Q9BZM3 304 aa10.88□□□□□ -0.67
SPG11-212ENST00000558790 CEP295Q9C0D2 2601 aa10.88□□□□□ -0.67
SPG11-212ENST00000558790 ZMYND12Q9H0C1 365 aa10.88□□□□□ -0.67
SPG11-212ENST00000558790 ADAM7Q9H2U9 754 aa10.88□□□□□ -0.67
SPG11-212ENST00000558790 SAMM50Q9Y512 469 aa10.88□□□□□ -0.67
SPG11-212ENST00000558790 PCDHA10Q9Y5I2 948 aa10.88□□□□□ -0.67
SPG11-212ENST00000558790 NID2Q14112 1375 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms