RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 CREMQ03060 361 aa13.3□□□□□ -0.28
SMAD3-206ENST00000558739 PLA2G4FQ68DD2 849 aa13.3□□□□□ -0.28
SMAD3-206ENST00000558739 PKN3Q6P5Z2 889 aa13.3□□□□□ -0.28
SMAD3-206ENST00000558739 NFXL1Q6ZNB6 911 aa13.3□□□□□ -0.28
SMAD3-206ENST00000558739 WDR5BQ86VZ2 330 aa13.3□□□□□ -0.28
SMAD3-206ENST00000558739 MICU3Q86XE3 530 aa13.3□□□□□ -0.28
SMAD3-206ENST00000558739 CEP57Q86XR8 500 aa13.3□□□□□ -0.28
SMAD3-206ENST00000558739 CPB2Q96IY4 423 aa13.3□□□□□ -0.28
SMAD3-206ENST00000558739 ZSWIM3Q96MP5 696 aa13.3□□□□□ -0.28
SMAD3-206ENST00000558739 COLEC11Q9BWP8 271 aa13.3□□□□□ -0.28
SMAD3-206ENST00000558739 LRRC2Q9BYS8 371 aa13.3□□□□□ -0.28
SMAD3-206ENST00000558739 BMP2KQ9NSY1 1161 aaPredicted RBP13.3□□□□□ -0.28
SMAD3-206ENST00000558739 POLR3BQ9NW08 1133 aaPredicted RBP13.3□□□□□ -0.28
SMAD3-206ENST00000558739 GDE1Q9NZC3 331 aa13.3□□□□□ -0.28
SMAD3-206ENST00000558739 GPSM3Q9Y4H4 160 aa13.3□□□□□ -0.28
SMAD3-206ENST00000558739 U3KPZ7 1027 aaPredicted RBP13.3□□□□□ -0.28
SMAD3-206ENST00000558739 PIEZO2Q9H5I5 2752 aa13.29□□□□□ -0.28
SMAD3-206ENST00000558739 LNP1A1A4G5 178 aa13.29□□□□□ -0.28
SMAD3-206ENST00000558739 SLC38A8A6NNN8 435 aa13.29□□□□□ -0.28
SMAD3-206ENST00000558739 PRC1O43663 620 aa13.29□□□□□ -0.28
SMAD3-206ENST00000558739 RPP40O75818 363 aaKnown RBP13.29□□□□□ -0.28
SMAD3-206ENST00000558739 AKAP5P24588 427 aa13.29□□□□□ -0.28
SMAD3-206ENST00000558739 SETQ01105 290 aaPredicted RBP13.29□□□□□ -0.28
SMAD3-206ENST00000558739 FAM171A1Q5VUB5 890 aa13.29□□□□□ -0.28
SMAD3-206ENST00000558739 PPP1R18Q6NYC8 613 aa13.29□□□□□ -0.28
SMAD3-206ENST00000558739 PDZD3Q86UT5 571 aa13.29□□□□□ -0.28
SMAD3-206ENST00000558739 GPR65Q8IYL9 337 aa13.29□□□□□ -0.28
SMAD3-206ENST00000558739 ZNF579Q8NAF0 562 aaKnown RBP13.29□□□□□ -0.28
SMAD3-206ENST00000558739 GAB3Q8WWW8 586 aa13.29□□□□□ -0.28
SMAD3-206ENST00000558739 PIK3R5Q8WYR1 880 aa13.29□□□□□ -0.28
SMAD3-206ENST00000558739 RSPRY1Q96DX4 576 aa13.29□□□□□ -0.28
SMAD3-206ENST00000558739 TTPALQ9BTX7 342 aa13.29□□□□□ -0.28
SMAD3-206ENST00000558739 TRMT61BQ9BVS5 477 aaKnown RBP13.29□□□□□ -0.28
SMAD3-206ENST00000558739 INO80BQ9C086 356 aaPredicted RBP13.29□□□□□ -0.28
SMAD3-206ENST00000558739 KLK14Q9P0G3 267 aa13.29□□□□□ -0.28
SMAD3-206ENST00000558739 COL4A3BPQ9Y5P4 624 aa13.29□□□□□ -0.28
SMAD3-206ENST00000558739 COL12A1Q99715 3063 aa13.28□□□□□ -0.28
SMAD3-206ENST00000558739 CASTOR2A6NHX0 329 aa13.28□□□□□ -0.28
SMAD3-206ENST00000558739 CCDC69A6NI79 296 aa13.28□□□□□ -0.28
SMAD3-206ENST00000558739 MSH4O15457 936 aa13.28□□□□□ -0.28
SMAD3-206ENST00000558739 EDIL3O43854 480 aa13.28□□□□□ -0.28
SMAD3-206ENST00000558739 MAFO75444 373 aaPredicted RBP13.28□□□□□ -0.28
SMAD3-206ENST00000558739 POU2F2P09086 479 aa13.28□□□□□ -0.28
SMAD3-206ENST00000558739 SRGAP2CP0DJJ0 459 aa13.28□□□□□ -0.28
SMAD3-206ENST00000558739 DNM2P50570 870 aa13.28□□□□□ -0.28
SMAD3-206ENST00000558739 FUT2Q10981 343 aa13.28□□□□□ -0.28
SMAD3-206ENST00000558739 HSP90AA2PQ14568 343 aaPredicted RBP13.28□□□□□ -0.28
SMAD3-206ENST00000558739 PRSS36Q5K4E3 855 aa13.28□□□□□ -0.28
SMAD3-206ENST00000558739 B4GALNT3Q6L9W6 998 aa13.28□□□□□ -0.28
SMAD3-206ENST00000558739 TTC8Q8TAM2 541 aa13.28□□□□□ -0.28
SMAD3-206ENST00000558739 IRF7Q92985 503 aa13.28□□□□□ -0.28
SMAD3-206ENST00000558739 TMEM143Q96AN5 459 aa13.28□□□□□ -0.28
SMAD3-206ENST00000558739 ASB16Q96NS5 453 aa13.28□□□□□ -0.28
SMAD3-206ENST00000558739 NIFKQ9BYG3 293 aaKnown RBP13.28□□□□□ -0.28
SMAD3-206ENST00000558739 CXCL16Q9H2A7 254 aa13.28□□□□□ -0.28
SMAD3-206ENST00000558739 SF3B1O75533 1304 aaKnown RBP eCLIP13.28□□□□□ -0.28
SMAD3-206ENST00000558739 ATMQ13315 3056 aa13.27□□□□□ -0.28
SMAD3-206ENST00000558739 WDR27A2RRH5 827 aa13.27□□□□□ -0.29
SMAD3-206ENST00000558739 HIP1O00291 1037 aa13.27□□□□□ -0.29
SMAD3-206ENST00000558739 TSPAN1O60635 241 aa13.27□□□□□ -0.29
SMAD3-206ENST00000558739 TADA2AO75478 443 aa13.27□□□□□ -0.29
SMAD3-206ENST00000558739 OR1D2P34982 312 aa13.27□□□□□ -0.29
SMAD3-206ENST00000558739 CDC42EP1Q00587 391 aa13.27□□□□□ -0.29
SMAD3-206ENST00000558739 COL28A1Q2UY09 1125 aa13.27□□□□□ -0.29
SMAD3-206ENST00000558739 ANO5Q75V66 913 aa13.27□□□□□ -0.29
SMAD3-206ENST00000558739 CACNA2D4Q7Z3S7 1137 aa13.27□□□□□ -0.29
SMAD3-206ENST00000558739 CDR2LQ86X02 465 aaPredicted RBP13.27□□□□□ -0.29
SMAD3-206ENST00000558739 FANCBQ8NB91 859 aa13.27□□□□□ -0.29
SMAD3-206ENST00000558739 DEFB124Q8NES8 71 aa13.27□□□□□ -0.29
SMAD3-206ENST00000558739 PRPF31Q8WWY3 499 aaKnown RBP13.27□□□□□ -0.29
SMAD3-206ENST00000558739 KIF12Q96FN5 646 aa13.27□□□□□ -0.29
SMAD3-206ENST00000558739 LOXL4Q96JB6 756 aa13.27□□□□□ -0.29
SMAD3-206ENST00000558739 ZFP14Q9HCL3 533 aa13.27□□□□□ -0.29
SMAD3-206ENST00000558739 VPS45Q9NRW7 570 aa13.27□□□□□ -0.29
SMAD3-206ENST00000558739 BARHL2Q9NY43 387 aa13.27□□□□□ -0.29
SMAD3-206ENST00000558739 USP9XQ93008 2570 aaPredicted RBP13.27□□□□□ -0.29
SMAD3-206ENST00000558739 GAS7O60861 476 aa13.26□□□□□ -0.29
SMAD3-206ENST00000558739 NR1I2O75469 434 aa13.26□□□□□ -0.29
SMAD3-206ENST00000558739 CAPNS1P04632 268 aa13.26□□□□□ -0.29
SMAD3-206ENST00000558739 CCDC192P0DO97 292 aa13.26□□□□□ -0.29
SMAD3-206ENST00000558739 GJA1P17302 382 aa13.26□□□□□ -0.29
SMAD3-206ENST00000558739 PSMC3P17980 439 aa13.26□□□□□ -0.29
SMAD3-206ENST00000558739 NPEPPSP55786 919 aa13.26□□□□□ -0.29
SMAD3-206ENST00000558739 XKR3Q5GH77 459 aa13.26□□□□□ -0.29
SMAD3-206ENST00000558739 CASC1Q6TDU7 716 aa13.26□□□□□ -0.29
SMAD3-206ENST00000558739 MGAQ8IWI9 3026 aa13.26□□□□□ -0.29
SMAD3-206ENST00000558739 ADAM32Q8TC27 787 aa13.26□□□□□ -0.29
SMAD3-206ENST00000558739 CORO1BQ9BR76 489 aa13.26□□□□□ -0.29
SMAD3-206ENST00000558739 UBN1Q9NPG3 1134 aa13.26□□□□□ -0.29
SMAD3-206ENST00000558739 V9GY48 417 aaPredicted RBP13.26□□□□□ -0.29
SMAD3-206ENST00000558739 URB1O60287 2271 aaKnown RBP13.25□□□□□ -0.29
SMAD3-206ENST00000558739 ARID2Q68CP9 1835 aa13.25□□□□□ -0.29
SMAD3-206ENST00000558739 DCLK1O15075 740 aa13.25□□□□□ -0.29
SMAD3-206ENST00000558739 MOSPD3O75425 235 aa13.25□□□□□ -0.29
SMAD3-206ENST00000558739 HOXA6P31267 233 aa13.25□□□□□ -0.29
SMAD3-206ENST00000558739 LAMTOR4Q0VGL1 99 aa13.25□□□□□ -0.29
SMAD3-206ENST00000558739 GRIK3Q13003 919 aa13.25□□□□□ -0.29
SMAD3-206ENST00000558739 CCINQ13939 588 aa13.25□□□□□ -0.29
SMAD3-206ENST00000558739 RAB33AQ14088 237 aa13.25□□□□□ -0.29
SMAD3-206ENST00000558739 LRRC32Q14392 662 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms