RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 RECQL4O94761 1208 aa12.69□□□□□ -0.38
CASC4-205ENST00000558735 PAPLNO95428 1278 aa12.69□□□□□ -0.38
CASC4-205ENST00000558735 GLUD1P00367 558 aa12.69□□□□□ -0.38
CASC4-205ENST00000558735 C1RP00736 705 aa12.69□□□□□ -0.38
CASC4-205ENST00000558735 THP07101 528 aa12.69□□□□□ -0.38
CASC4-205ENST00000558735 CENPBP07199 599 aaPredicted RBP12.69□□□□□ -0.38
CASC4-205ENST00000558735 RPL17P18621 184 aaKnown RBP12.69□□□□□ -0.38
CASC4-205ENST00000558735 EFNA5P52803 228 aa12.69□□□□□ -0.38
CASC4-205ENST00000558735 HSP90AA2PQ14568 343 aaPredicted RBP12.69□□□□□ -0.38
CASC4-205ENST00000558735 TMEM132AQ24JP5 1023 aa12.69□□□□□ -0.38
CASC4-205ENST00000558735 PRSS55Q6UWB4 352 aaPredicted RBP12.69□□□□□ -0.38
CASC4-205ENST00000558735 CYP26C1Q6V0L0 522 aa12.69□□□□□ -0.38
CASC4-205ENST00000558735 CCDC149Q6ZUS6 474 aa12.69□□□□□ -0.38
CASC4-205ENST00000558735 KCNK18Q7Z418 384 aa12.69□□□□□ -0.38
CASC4-205ENST00000558735 DAW1Q8N136 415 aa12.69□□□□□ -0.38
CASC4-205ENST00000558735 SIX5Q8N196 739 aa12.69□□□□□ -0.38
CASC4-205ENST00000558735 SNX29Q8TEQ0 813 aa12.69□□□□□ -0.38
CASC4-205ENST00000558735 HDAC7Q8WUI4 952 aa12.69□□□□□ -0.38
CASC4-205ENST00000558735 ZNF707Q96C28 371 aaPredicted RBP12.69□□□□□ -0.38
CASC4-205ENST00000558735 TMX3Q96JJ7 454 aa12.69□□□□□ -0.38
CASC4-205ENST00000558735 ADPGKQ9BRR6 497 aa12.69□□□□□ -0.38
CASC4-205ENST00000558735 MMTAG2Q9BU76 263 aaKnown RBP12.69□□□□□ -0.38
CASC4-205ENST00000558735 PLEKHA4Q9H4M7 779 aa12.69□□□□□ -0.38
CASC4-205ENST00000558735 DNM3Q9UQ16 869 aa12.69□□□□□ -0.38
CASC4-205ENST00000558735 GDAQ9Y2T3 454 aa12.69□□□□□ -0.38
CASC4-205ENST00000558735 STK24Q9Y6E0 443 aa12.69□□□□□ -0.38
CASC4-205ENST00000558735 OTOGLQ3ZCN5 2332 aa12.68□□□□□ -0.38
CASC4-205ENST00000558735 MED19A0JLT2 244 aaPredicted RBP12.68□□□□□ -0.38
CASC4-205ENST00000558735 SFI1A8K8P3 1242 aa12.68□□□□□ -0.38
CASC4-205ENST00000558735 LAD1O00515 517 aa12.68□□□□□ -0.38
CASC4-205ENST00000558735 CD2BP2O95400 341 aaKnown RBP12.68□□□□□ -0.38
CASC4-205ENST00000558735 PRPHP41219 470 aa12.68□□□□□ -0.38
CASC4-205ENST00000558735 NPTX2P47972 431 aa12.68□□□□□ -0.38
CASC4-205ENST00000558735 PEX3P56589 373 aa12.68□□□□□ -0.38
CASC4-205ENST00000558735 PUM1Q14671 1186 aaKnown RBP eCLIP12.68□□□□□ -0.388e-6■□□□□ 8.1
CASC4-205ENST00000558735 RABEP1Q15276 862 aa12.68□□□□□ -0.38
CASC4-205ENST00000558735 RTP2Q5QGT7 225 aa12.68□□□□□ -0.38
CASC4-205ENST00000558735 ATF7IP2Q5U623 682 aa12.68□□□□□ -0.38
CASC4-205ENST00000558735 RINT1Q6NUQ1 792 aa12.68□□□□□ -0.38
CASC4-205ENST00000558735 DTHD1Q6ZMT9 781 aa12.68□□□□□ -0.38
CASC4-205ENST00000558735 C1orf186Q6ZWK4 172 aa12.68□□□□□ -0.38
CASC4-205ENST00000558735 TAS1R3Q7RTX0 852 aa12.68□□□□□ -0.38
CASC4-205ENST00000558735 GLYCTKQ8IVS8 523 aa12.68□□□□□ -0.38
CASC4-205ENST00000558735 LNX1Q8TBB1 728 aaPredicted RBP12.68□□□□□ -0.38
CASC4-205ENST00000558735 HASPINQ8TF76 798 aa12.68□□□□□ -0.38
CASC4-205ENST00000558735 NXPE3Q969Y0 559 aa12.68□□□□□ -0.38
CASC4-205ENST00000558735 CLSTN3Q9BQT9 956 aa12.68□□□□□ -0.38
CASC4-205ENST00000558735 RUSC1Q9BVN2 902 aa12.68□□□□□ -0.38
CASC4-205ENST00000558735 RAB34Q9BZG1 259 aa12.68□□□□□ -0.38
CASC4-205ENST00000558735 NT5C3AQ9H0P0 336 aa12.68□□□□□ -0.38
CASC4-205ENST00000558735 PTPRHQ9HD43 1115 aa12.68□□□□□ -0.38
CASC4-205ENST00000558735 WDR6Q9NNW5 1121 aaKnown RBP12.68□□□□□ -0.38
CASC4-205ENST00000558735 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.68□□□□□ -0.38
CASC4-205ENST00000558735 DLL3Q9NYJ7 618 aa12.68□□□□□ -0.38
CASC4-205ENST00000558735 DPP7Q9UHL4 492 aa12.68□□□□□ -0.38
CASC4-205ENST00000558735 CEP250Q9BV73 2442 aa12.68□□□□□ -0.38
CASC4-205ENST00000558735 TDRD15B5MCY1 1934 aaKnown RBP12.67□□□□□ -0.38
CASC4-205ENST00000558735 CCDC169A6NNP5 214 aa12.67□□□□□ -0.38
CASC4-205ENST00000558735 KIF4AO95239 1232 aa12.67□□□□□ -0.38
CASC4-205ENST00000558735 MAPK7Q13164 816 aa12.67□□□□□ -0.38
CASC4-205ENST00000558735 DCAF4L1Q3SXM0 396 aa12.67□□□□□ -0.38
CASC4-205ENST00000558735 FAM171A1Q5VUB5 890 aa12.67□□□□□ -0.38
CASC4-205ENST00000558735 KRT79Q5XKE5 535 aa12.67□□□□□ -0.38
CASC4-205ENST00000558735 MCTP1Q6DN14 999 aa12.67□□□□□ -0.38
CASC4-205ENST00000558735 PHLDB3Q6NSJ2 640 aa12.67□□□□□ -0.38
CASC4-205ENST00000558735 CD300LGQ6UXG3 332 aa12.67□□□□□ -0.38
CASC4-205ENST00000558735 ALKAL1Q6UXT8 129 aa12.67□□□□□ -0.38
CASC4-205ENST00000558735 DGLUCYQ7Z3D6 616 aa12.67□□□□□ -0.38
CASC4-205ENST00000558735 CEP57Q86XR8 500 aa12.67□□□□□ -0.38
CASC4-205ENST00000558735 PPP1R10Q96QC0 940 aaKnown RBP12.67□□□□□ -0.38
CASC4-205ENST00000558735 ACO2Q99798 780 aaKnown RBP12.67□□□□□ -0.38
CASC4-205ENST00000558735 NTPCRQ9BSD7 190 aaKnown RBP12.67□□□□□ -0.38
CASC4-205ENST00000558735 TTPALQ9BTX7 342 aa12.67□□□□□ -0.38
CASC4-205ENST00000558735 PRKD2Q9BZL6 878 aa12.67□□□□□ -0.38
CASC4-205ENST00000558735 TMEM134Q9H6X4 195 aa12.67□□□□□ -0.38
CASC4-205ENST00000558735 EPS15L1Q9UBC2 864 aa12.67□□□□□ -0.38
CASC4-205ENST00000558735 FBXL21Q9UKT6 434 aa12.67□□□□□ -0.38
CASC4-205ENST00000558735 TNFSF13BQ9Y275 285 aa12.67□□□□□ -0.38
CASC4-205ENST00000558735 SF3B1O75533 1304 aaKnown RBP eCLIP12.66□□□□□ -0.38
CASC4-205ENST00000558735 KRBA1A5PL33 1030 aa12.66□□□□□ -0.38
CASC4-205ENST00000558735 ADAM12O43184 909 aa12.66□□□□□ -0.38
CASC4-205ENST00000558735 HIP1RO75146 1068 aa12.66□□□□□ -0.38
CASC4-205ENST00000558735 ATP2C1P98194 919 aaPredicted RBP12.66□□□□□ -0.38
CASC4-205ENST00000558735 RILPL1Q5EBL4 403 aa12.66□□□□□ -0.38
CASC4-205ENST00000558735 ELMSAN1Q6PJG2 1045 aa12.66□□□□□ -0.38
CASC4-205ENST00000558735 DCLRE1AQ6PJP8 1040 aa12.66□□□□□ -0.38
CASC4-205ENST00000558735 CEP120Q8N960 986 aa12.66□□□□□ -0.38
CASC4-205ENST00000558735 RSAD2Q8WXG1 361 aa12.66□□□□□ -0.38
CASC4-205ENST00000558735 PIK3R5Q8WYR1 880 aa12.66□□□□□ -0.38
CASC4-205ENST00000558735 SMG7Q92540 1137 aaKnown RBP12.66□□□□□ -0.38
CASC4-205ENST00000558735 BORCS6Q96GS4 357 aa12.66□□□□□ -0.38
CASC4-205ENST00000558735 PNMA5Q96PV4 448 aa12.66□□□□□ -0.38
CASC4-205ENST00000558735 MYADMQ96S97 322 aa12.66□□□□□ -0.38
CASC4-205ENST00000558735 DLGAP2Q9P1A6 1054 aa12.66□□□□□ -0.38
CASC4-205ENST00000558735 DAXXQ9UER7 740 aaPredicted RBP12.66□□□□□ -0.38
CASC4-205ENST00000558735 RBM19Q9Y4C8 960 aaKnown RBP12.66□□□□□ -0.38
CASC4-205ENST00000558735 SMIM28A0A1B0GU29 152 aa12.65□□□□□ -0.38
CASC4-205ENST00000558735 ZMYND10O75800 440 aa12.65□□□□□ -0.38
CASC4-205ENST00000558735 SRFP11831 508 aa12.65□□□□□ -0.38
CASC4-205ENST00000558735 GJB2P29033 226 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms