RNA–Protein interactions for RNA: ENST00000558731.1

CSPG4P5-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 5, humanhuman

BASIC

Gene CSPG4P5, Length 3,730 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5-201ENST00000558731 GPR161Q8N6U8 529 aaKnown RBP11.62□□□□□ -0.55
CSPG4P5-201ENST00000558731 SLC35G2Q8TBE7 412 aa11.62□□□□□ -0.55
CSPG4P5-201ENST00000558731 CPA5Q8WXQ8 436 aa11.62□□□□□ -0.55
CSPG4P5-201ENST00000558731 HVCN1Q96D96 273 aa11.62□□□□□ -0.55
CSPG4P5-201ENST00000558731 ARHGEF26Q96DR7 871 aa11.62□□□□□ -0.55
CSPG4P5-201ENST00000558731 NTPCRQ9BSD7 190 aaKnown RBP11.62□□□□□ -0.55
CSPG4P5-201ENST00000558731 CWC15Q9P013 229 aaKnown RBP11.62□□□□□ -0.55
CSPG4P5-201ENST00000558731 THAP12O43422 761 aa11.62□□□□□ -0.55
CSPG4P5-201ENST00000558731 SNAI1O95863 264 aaPredicted RBP11.62□□□□□ -0.55
CSPG4P5-201ENST00000558731 TDRD10Q5VZ19 366 aaKnown RBP11.62□□□□□ -0.55
CSPG4P5-201ENST00000558731 NOP9Q86U38 636 aaKnown RBP11.62□□□□□ -0.55
CSPG4P5-201ENST00000558731 RABGGTAQ92696 567 aa11.62□□□□□ -0.55
CSPG4P5-201ENST00000558731 JPH2Q9BR39 696 aaPredicted RBP11.62□□□□□ -0.55
CSPG4P5-201ENST00000558731 NIFKQ9BYG3 293 aaKnown RBP11.62□□□□□ -0.55
CSPG4P5-201ENST00000558731 HAPLN2Q9GZV7 340 aa11.62□□□□□ -0.55
CSPG4P5-201ENST00000558731 ZCCHC17Q9NP64 241 aaKnown RBP11.62□□□□□ -0.55
CSPG4P5-201ENST00000558731 USTQ9Y2C2 406 aa11.62□□□□□ -0.55
CSPG4P5-201ENST00000558731 PTPRJQ12913 1337 aa11.62□□□□□ -0.55
CSPG4P5-201ENST00000558731 GUCY2FP51841 1108 aa11.62□□□□□ -0.55
CSPG4P5-201ENST00000558731 EFNA5P52803 228 aa11.62□□□□□ -0.55
CSPG4P5-201ENST00000558731 SCARA3Q6AZY7 606 aa11.62□□□□□ -0.55
CSPG4P5-201ENST00000558731 ANKRD23Q86SG2 305 aa11.62□□□□□ -0.55
CSPG4P5-201ENST00000558731 PNKPQ96T60 521 aa11.62□□□□□ -0.55
CSPG4P5-201ENST00000558731 TRIM31Q9BZY9 425 aa11.62□□□□□ -0.55
CSPG4P5-201ENST00000558731 ST6GALNAC4Q9H4F1 302 aa11.62□□□□□ -0.55
CSPG4P5-201ENST00000558731 GRID2IPA4D2P6 1211 aa11.61□□□□□ -0.55
CSPG4P5-201ENST00000558731 TOM1L1O75674 476 aa11.61□□□□□ -0.55
CSPG4P5-201ENST00000558731 TCP1P17987 556 aaKnown RBP11.61□□□□□ -0.55
CSPG4P5-201ENST00000558731 MAPK4P31152 587 aa11.61□□□□□ -0.55
CSPG4P5-201ENST00000558731 PHKA2P46019 1235 aa11.61□□□□□ -0.55
CSPG4P5-201ENST00000558731 NOP14P78316 857 aaKnown RBP11.61□□□□□ -0.55
CSPG4P5-201ENST00000558731 MYBPC2Q14324 1141 aa11.61□□□□□ -0.55
CSPG4P5-201ENST00000558731 FAM110CQ1W6H9 321 aa11.61□□□□□ -0.55
CSPG4P5-201ENST00000558731 CHADLQ6NUI6 762 aa11.61□□□□□ -0.55
CSPG4P5-201ENST00000558731 LLGL2Q6P1M3 1020 aa11.61□□□□□ -0.55
CSPG4P5-201ENST00000558731 TMEM192Q8IY95 271 aa11.61□□□□□ -0.55
CSPG4P5-201ENST00000558731 ZNF516Q92618 1163 aa11.61□□□□□ -0.55
CSPG4P5-201ENST00000558731 ABHD16BQ9H3Z7 469 aa11.61□□□□□ -0.55
CSPG4P5-201ENST00000558731 RPF1Q9H9Y2 349 aaKnown RBP11.61□□□□□ -0.55
CSPG4P5-201ENST00000558731 UMODL1Q5DID0 1318 aa11.61□□□□□ -0.55
CSPG4P5-201ENST00000558731 ESYT3A0FGR9 886 aa11.61□□□□□ -0.55
CSPG4P5-201ENST00000558731 ERLIN1O75477 346 aa11.61□□□□□ -0.55
CSPG4P5-201ENST00000558731 LDHAP00338 332 aaKnown RBP11.61□□□□□ -0.55
CSPG4P5-201ENST00000558731 JAM2P57087 298 aa11.61□□□□□ -0.55
CSPG4P5-201ENST00000558731 ZNF792Q3KQV3 632 aa11.61□□□□□ -0.55
CSPG4P5-201ENST00000558731 GLRA4Q5JXX5 417 aa11.61□□□□□ -0.55
CSPG4P5-201ENST00000558731 CATSPER4Q7RTX7 472 aa11.61□□□□□ -0.55
CSPG4P5-201ENST00000558731 SHCBP1Q8NEM2 672 aa11.61□□□□□ -0.55
CSPG4P5-201ENST00000558731 ZIC5Q96T25 663 aa11.61□□□□□ -0.55
CSPG4P5-201ENST00000558731 TLR10Q9BXR5 811 aa11.61□□□□□ -0.55
CSPG4P5-201ENST00000558731 AP5M1Q9H0R1 490 aa11.61□□□□□ -0.55
CSPG4P5-201ENST00000558731 RASSF4Q9H2L5 321 aa11.61□□□□□ -0.55
CSPG4P5-201ENST00000558731 GPBP1L1Q9HC44 474 aaPredicted RBP11.61□□□□□ -0.55
CSPG4P5-201ENST00000558731 VTA1Q9NP79 307 aa11.61□□□□□ -0.55
CSPG4P5-201ENST00000558731 PDLIM7Q9NR12 457 aa11.61□□□□□ -0.55
CSPG4P5-201ENST00000558731 MYL6P60660 151 aa11.61□□□□□ -0.55
CSPG4P5-201ENST00000558731 VSNL1P62760 191 aa11.61□□□□□ -0.55
CSPG4P5-201ENST00000558731 HLTFQ14527 1009 aaKnown RBP eCLIP11.61□□□□□ -0.55
CSPG4P5-201ENST00000558731 GRIK4Q16099 956 aa11.61□□□□□ -0.55
CSPG4P5-201ENST00000558731 DGKDQ16760 1214 aa11.61□□□□□ -0.55
CSPG4P5-201ENST00000558731 CFAP221Q4G0U5 840 aa11.61□□□□□ -0.55
CSPG4P5-201ENST00000558731 TAPT1Q6NXT6 567 aa11.61□□□□□ -0.55
CSPG4P5-201ENST00000558731 C8orf74Q6P047 294 aa11.61□□□□□ -0.55
CSPG4P5-201ENST00000558731 GOLGA6L1Q8N7Z2 621 aa11.61□□□□□ -0.55
CSPG4P5-201ENST00000558731 CCDC102AQ96A19 550 aa11.61□□□□□ -0.55
CSPG4P5-201ENST00000558731 KRT12Q99456 494 aa11.61□□□□□ -0.55
CSPG4P5-201ENST00000558731 OSMRQ99650 979 aa11.61□□□□□ -0.55
CSPG4P5-201ENST00000558731 C11orf70Q9BRQ4 267 aa11.61□□□□□ -0.55
CSPG4P5-201ENST00000558731 KIAA1586Q9HCI6 787 aa11.61□□□□□ -0.55
CSPG4P5-201ENST00000558731 DNAH12Q6ZR08 3092 aa11.61□□□□□ -0.55
CSPG4P5-201ENST00000558731 BUB1BO60566 1050 aaPredicted RBP11.6□□□□□ -0.55
CSPG4P5-201ENST00000558731 TNNC2P02585 160 aa11.6□□□□□ -0.55
CSPG4P5-201ENST00000558731 GPC3P51654 580 aa11.6□□□□□ -0.55
CSPG4P5-201ENST00000558731 PPARDQ03181 441 aa11.6□□□□□ -0.55
CSPG4P5-201ENST00000558731 NFIL3Q16649 462 aa11.6□□□□□ -0.55
CSPG4P5-201ENST00000558731 RGMBQ6NW40 437 aa11.6□□□□□ -0.55
CSPG4P5-201ENST00000558731 GTF3C2Q8WUA4 911 aaPredicted RBP11.6□□□□□ -0.55
CSPG4P5-201ENST00000558731 LMBR1Q8WVP7 490 aa11.6□□□□□ -0.55
CSPG4P5-201ENST00000558731 AMFRQ9UKV5 643 aa11.6□□□□□ -0.55
CSPG4P5-201ENST00000558731 HES2Q9Y543 173 aa11.6□□□□□ -0.55
CSPG4P5-201ENST00000558731 DICER1Q9UPY3 1922 aaKnown RBP11.6□□□□□ -0.55
CSPG4P5-201ENST00000558731 ANO9A1A5B4 782 aa11.6□□□□□ -0.55
CSPG4P5-201ENST00000558731 CTSHP09668 335 aa11.6□□□□□ -0.55
CSPG4P5-201ENST00000558731 CYP11B1P15538 503 aa11.6□□□□□ -0.55
CSPG4P5-201ENST00000558731 CAPN2P17655 700 aa11.6□□□□□ -0.55
CSPG4P5-201ENST00000558731 GYS2P54840 703 aa11.6□□□□□ -0.55
CSPG4P5-201ENST00000558731 AMPD2Q01433 879 aa11.6□□□□□ -0.55
CSPG4P5-201ENST00000558731 TARBP2Q15633 366 aaKnown RBP11.6□□□□□ -0.55
CSPG4P5-201ENST00000558731 PLPPR4Q7Z2D5 763 aa11.6□□□□□ -0.55
CSPG4P5-201ENST00000558731 TLK2Q86UE8 772 aa11.6□□□□□ -0.55
CSPG4P5-201ENST00000558731 C12orf56Q8IXR9 622 aa11.6□□□□□ -0.55
CSPG4P5-201ENST00000558731 LMO3Q8TAP4 145 aa11.6□□□□□ -0.55
CSPG4P5-201ENST00000558731 C2orf40Q9H1Z8 148 aa11.6□□□□□ -0.55
CSPG4P5-201ENST00000558731 IGKV6D-21A0A0A0MT36 114 aa11.6□□□□□ -0.55
CSPG4P5-201ENST00000558731 CST3P01034 146 aaPredicted RBP11.6□□□□□ -0.55
CSPG4P5-201ENST00000558731 ZBTB48P10074 688 aaPredicted RBP11.6□□□□□ -0.55
CSPG4P5-201ENST00000558731 RAP1GAPP47736 663 aa11.6□□□□□ -0.55
CSPG4P5-201ENST00000558731 NFX1Q12986 1120 aaKnown RBP11.6□□□□□ -0.55
CSPG4P5-201ENST00000558731 ZNF699Q32M78 642 aa11.6□□□□□ -0.55
CSPG4P5-201ENST00000558731 WDR72Q3MJ13 1102 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms