RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 ZSCAN12O43309 604 aa11.26□□□□□ -0.61
TPM1-212ENST00000558347 MBTPS2O43462 519 aa11.26□□□□□ -0.61
TPM1-212ENST00000558347 ZNF18P17022 549 aa11.26□□□□□ -0.61
TPM1-212ENST00000558347 ARF4P18085 180 aaPredicted RBP11.26□□□□□ -0.61
TPM1-212ENST00000558347 AXLP30530 894 aa11.26□□□□□ -0.61
TPM1-212ENST00000558347 TBX2Q13207 712 aaPredicted RBP11.26□□□□□ -0.61
TPM1-212ENST00000558347 PCBP1Q15365 356 aaKnown RBP eCLIP11.26□□□□□ -0.614e-6■□□□□ 10.4
TPM1-212ENST00000558347 DUSP6Q16828 381 aa11.26□□□□□ -0.61
TPM1-212ENST00000558347 NOTUMQ6P988 496 aa11.26□□□□□ -0.61
TPM1-212ENST00000558347 PADI6Q6TGC4 694 aa11.26□□□□□ -0.61
TPM1-212ENST00000558347 CDR2LQ86X02 465 aaPredicted RBP11.26□□□□□ -0.61
TPM1-212ENST00000558347 ZNF280BQ86YH2 543 aa11.26□□□□□ -0.61
TPM1-212ENST00000558347 MCPH1Q8NEM0 835 aa11.26□□□□□ -0.61
TPM1-212ENST00000558347 VN1R2Q8NFZ6 395 aa11.26□□□□□ -0.61
TPM1-212ENST00000558347 BCL7CQ8WUZ0 217 aaPredicted RBP11.26□□□□□ -0.61
TPM1-212ENST00000558347 BSNDQ8WZ55 320 aa11.26□□□□□ -0.61
TPM1-212ENST00000558347 ZNF592Q92610 1267 aa11.26□□□□□ -0.61
TPM1-212ENST00000558347 SRRTQ9BXP5 876 aaKnown RBP11.26□□□□□ -0.61
TPM1-212ENST00000558347 GBP3Q9H0R5 595 aa11.26□□□□□ -0.61
TPM1-212ENST00000558347 RNF39Q9H2S5 420 aa11.26□□□□□ -0.61
TPM1-212ENST00000558347 RSAD1Q9HA92 442 aa11.26□□□□□ -0.61
TPM1-212ENST00000558347 POLD4Q9HCU8 107 aa11.26□□□□□ -0.61
TPM1-212ENST00000558347 ENTPD7Q9NQZ7 604 aa11.26□□□□□ -0.61
TPM1-212ENST00000558347 TRMT1Q9NXH9 659 aaKnown RBP11.26□□□□□ -0.61
TPM1-212ENST00000558347 DNAJB4Q9UDY4 337 aa11.26□□□□□ -0.61
TPM1-212ENST00000558347 PUF60Q9UHX1 559 aaKnown RBP11.26□□□□□ -0.61
TPM1-212ENST00000558347 BARX2Q9UMQ3 279 aaPredicted RBP11.26□□□□□ -0.61
TPM1-212ENST00000558347 HES2Q9Y543 173 aa11.26□□□□□ -0.61
TPM1-212ENST00000558347 IPPQ9Y573 584 aa11.26□□□□□ -0.61
TPM1-212ENST00000558347 ARHGEF35A5YM69 484 aa11.25□□□□□ -0.61
TPM1-212ENST00000558347 LRRIQ4A6NIV6 560 aa11.25□□□□□ -0.61
TPM1-212ENST00000558347 ARHGAP6O43182 974 aa11.25□□□□□ -0.61
TPM1-212ENST00000558347 DDHD2O94830 711 aa11.25□□□□□ -0.61
TPM1-212ENST00000558347 GALTP07902 379 aa11.25□□□□□ -0.61
TPM1-212ENST00000558347 PRR29P0C7W0 189 aa11.25□□□□□ -0.61
TPM1-212ENST00000558347 ATP1A3P13637 1013 aa11.25□□□□□ -0.61
TPM1-212ENST00000558347 ALDH7A1P49419 539 aaKnown RBP11.25□□□□□ -0.61
TPM1-212ENST00000558347 KRT17Q04695 432 aa11.25□□□□□ -0.61
TPM1-212ENST00000558347 DPYDQ12882 1025 aa11.25□□□□□ -0.61
TPM1-212ENST00000558347 SMAD2Q15796 467 aaKnown RBP11.25□□□□□ -0.61
TPM1-212ENST00000558347 CDCA2Q69YH5 1023 aaPredicted RBP11.25□□□□□ -0.61
TPM1-212ENST00000558347 PDE12Q6L8Q7 609 aaKnown RBP11.25□□□□□ -0.61
TPM1-212ENST00000558347 TMC7Q7Z402 723 aa11.25□□□□□ -0.61
TPM1-212ENST00000558347 RSPH1Q8WYR4 309 aa11.25□□□□□ -0.61
TPM1-212ENST00000558347 RAD54LQ92698 747 aa11.25□□□□□ -0.61
TPM1-212ENST00000558347 CD207Q9UJ71 328 aa11.25□□□□□ -0.61
TPM1-212ENST00000558347 KIAA1024Q9UPX6 916 aa11.25□□□□□ -0.61
TPM1-212ENST00000558347 CNTNAP2Q9UHC6 1331 aa11.25□□□□□ -0.61
TPM1-212ENST00000558347 TTLL13PA6NNM8 815 aa11.25□□□□□ -0.61
TPM1-212ENST00000558347 E9PMD0 336 aa11.25□□□□□ -0.61
TPM1-212ENST00000558347 POMCP01189 267 aa11.25□□□□□ -0.61
TPM1-212ENST00000558347 ITGA4P13612 1032 aa11.25□□□□□ -0.61
TPM1-212ENST00000558347 CYP11B2P19099 503 aa11.25□□□□□ -0.61
TPM1-212ENST00000558347 BMP6P22004 513 aa11.25□□□□□ -0.61
TPM1-212ENST00000558347 AFMP43652 599 aa11.25□□□□□ -0.61
TPM1-212ENST00000558347 SLC11A1P49279 550 aa11.25□□□□□ -0.61
TPM1-212ENST00000558347 ETF1P62495 437 aaKnown RBP11.25□□□□□ -0.61
TPM1-212ENST00000558347 AMPD3Q01432 767 aa11.25□□□□□ -0.61
TPM1-212ENST00000558347 RNASELQ05823 741 aaKnown RBP11.25□□□□□ -0.61
TPM1-212ENST00000558347 SMAD4Q13485 552 aaKnown RBP11.25□□□□□ -0.61
TPM1-212ENST00000558347 KCNC3Q14003 757 aa11.25□□□□□ -0.61
TPM1-212ENST00000558347 CNNM4Q6P4Q7 775 aa11.25□□□□□ -0.61
TPM1-212ENST00000558347 GJD3Q8N144 294 aa11.25□□□□□ -0.61
TPM1-212ENST00000558347 URGCPQ8TCY9 931 aa11.25□□□□□ -0.61
TPM1-212ENST00000558347 LARP4BQ92615 738 aaKnown RBP11.25□□□□□ -0.61
TPM1-212ENST00000558347 CCDC51Q96ER9 411 aa11.25□□□□□ -0.61
TPM1-212ENST00000558347 TMEM169Q96HH4 297 aa11.25□□□□□ -0.61
TPM1-212ENST00000558347 IGSF21Q96ID5 467 aa11.25□□□□□ -0.61
TPM1-212ENST00000558347 GSDMAQ96QA5 445 aa11.25□□□□□ -0.61
TPM1-212ENST00000558347 PLIN2Q99541 437 aa11.25□□□□□ -0.61
TPM1-212ENST00000558347 CDCA3Q99618 268 aaPredicted RBP11.25□□□□□ -0.61
TPM1-212ENST00000558347 C7orf25Q9BPX7 421 aa11.25□□□□□ -0.61
TPM1-212ENST00000558347 GTPBP4Q9BZE4 634 aaKnown RBP11.25□□□□□ -0.61
TPM1-212ENST00000558347 LRRC27Q9C0I9 530 aa11.25□□□□□ -0.61
TPM1-212ENST00000558347 BHMT2Q9H2M3 363 aa11.25□□□□□ -0.61
TPM1-212ENST00000558347 EPHX3Q9H6B9 360 aa11.25□□□□□ -0.61
TPM1-212ENST00000558347 NGRNQ9NPE2 291 aaKnown RBP11.25□□□□□ -0.61
TPM1-212ENST00000558347 FANCLQ9NW38 375 aa11.25□□□□□ -0.61
TPM1-212ENST00000558347 MIOSQ9NXC5 875 aa11.25□□□□□ -0.61
TPM1-212ENST00000558347 C2orf71A6NGG8 1288 aa11.24□□□□□ -0.61
TPM1-212ENST00000558347 EYA4O95677 639 aa11.24□□□□□ -0.61
TPM1-212ENST00000558347 EDN1P05305 212 aa11.24□□□□□ -0.61
TPM1-212ENST00000558347 ZP2Q05996 745 aa11.24□□□□□ -0.61
TPM1-212ENST00000558347 COASYQ13057 564 aa11.24□□□□□ -0.61
TPM1-212ENST00000558347 ISM2Q6H9L7 571 aa11.24□□□□□ -0.61
TPM1-212ENST00000558347 SLC27A1Q6PCB7 646 aa11.24□□□□□ -0.61
TPM1-212ENST00000558347 PPP4R3CPQ6ZMV5 832 aa11.24□□□□□ -0.61
TPM1-212ENST00000558347 SV2BQ7L1I2 683 aa11.24□□□□□ -0.61
TPM1-212ENST00000558347 KCNK18Q7Z418 384 aa11.24□□□□□ -0.61
TPM1-212ENST00000558347 GRAMD1CQ8IYS0 662 aa11.24□□□□□ -0.61
TPM1-212ENST00000558347 SMRP1Q8NCR6 262 aa11.24□□□□□ -0.61
TPM1-212ENST00000558347 ZFP42Q96MM3 310 aa11.24□□□□□ -0.61
TPM1-212ENST00000558347 APOL6Q9BWW8 343 aa11.24□□□□□ -0.61
TPM1-212ENST00000558347 VN1R3Q9BXE9 311 aa11.24□□□□□ -0.61
TPM1-212ENST00000558347 ZMYND15Q9H091 742 aa11.24□□□□□ -0.61
TPM1-212ENST00000558347 ZBP1Q9H171 429 aa11.24□□□□□ -0.61
TPM1-212ENST00000558347 FZD8Q9H461 694 aa11.24□□□□□ -0.61
TPM1-212ENST00000558347 NXF3Q9H4D5 531 aaKnown RBP11.24□□□□□ -0.61
TPM1-212ENST00000558347 PRMT7Q9NVM4 692 aaPredicted RBP11.24□□□□□ -0.61
TPM1-212ENST00000558347 DNM3Q9UQ16 869 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms