RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 GLIS3Q8NEA6 775 aa13.19□□□□□ -0.3
HMGB1P8-201ENST00000558211 FIZ1Q96SL8 496 aa13.19□□□□□ -0.3
HMGB1P8-201ENST00000558211 NTPCRQ9BSD7 190 aaKnown RBP13.19□□□□□ -0.3
HMGB1P8-201ENST00000558211 NFKBIZQ9BYH8 718 aa13.19□□□□□ -0.3
HMGB1P8-201ENST00000558211 PRMT7Q9NVM4 692 aaPredicted RBP13.19□□□□□ -0.3
HMGB1P8-201ENST00000558211 ARHGAP28Q9P2N2 729 aa13.19□□□□□ -0.3
HMGB1P8-201ENST00000558211 PIN4Q9Y237 131 aaKnown RBP13.19□□□□□ -0.3
HMGB1P8-201ENST00000558211 SQORQ9Y6N5 450 aa13.19□□□□□ -0.3
HMGB1P8-201ENST00000558211 PDE4DIPQ5VU43 2346 aa13.18□□□□□ -0.3
HMGB1P8-201ENST00000558211 H0YCG3 227 aa13.18□□□□□ -0.3
HMGB1P8-201ENST00000558211 BIN1O00499 593 aa13.18□□□□□ -0.3
HMGB1P8-201ENST00000558211 PRPF6O94906 941 aaKnown RBP13.18□□□□□ -0.3
HMGB1P8-201ENST00000558211 FGBP02675 491 aa13.18□□□□□ -0.3
HMGB1P8-201ENST00000558211 MAPTP10636 758 aaKnown RBP13.18□□□□□ -0.3
HMGB1P8-201ENST00000558211 ZSCAN20P17040 1043 aaPredicted RBP13.18□□□□□ -0.3
HMGB1P8-201ENST00000558211 PTMSP20962 102 aa13.18□□□□□ -0.3
HMGB1P8-201ENST00000558211 ATP1A2P50993 1020 aa13.18□□□□□ -0.3
HMGB1P8-201ENST00000558211 CASP5P51878 434 aa13.18□□□□□ -0.3
HMGB1P8-201ENST00000558211 NCBP1Q09161 790 aaKnown RBP13.18□□□□□ -0.3
HMGB1P8-201ENST00000558211 PRPF4BQ13523 1007 aaKnown RBP13.18□□□□□ -0.3
HMGB1P8-201ENST00000558211 CNKSR3Q6P9H4 555 aa13.18□□□□□ -0.3
HMGB1P8-201ENST00000558211 C16orf59Q7L2K0 433 aa13.18□□□□□ -0.3
HMGB1P8-201ENST00000558211 TAS1R3Q7RTX0 852 aa13.18□□□□□ -0.3
HMGB1P8-201ENST00000558211 ELOA2Q8IYF1 753 aaPredicted RBP13.18□□□□□ -0.3
HMGB1P8-201ENST00000558211 VWCEQ96DN2 955 aa13.18□□□□□ -0.3
HMGB1P8-201ENST00000558211 BICD1Q96G01 975 aa13.18□□□□□ -0.3
HMGB1P8-201ENST00000558211 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.18□□□□□ -0.3
HMGB1P8-201ENST00000558211 CCDC113Q9H0I3 377 aa13.18□□□□□ -0.3
HMGB1P8-201ENST00000558211 TMX1Q9H3N1 280 aa13.18□□□□□ -0.3
HMGB1P8-201ENST00000558211 FZD8Q9H461 694 aa13.18□□□□□ -0.3
HMGB1P8-201ENST00000558211 OLFML3Q9NRN5 406 aa13.18□□□□□ -0.3
HMGB1P8-201ENST00000558211 TBX20Q9UMR3 447 aa13.18□□□□□ -0.3
HMGB1P8-201ENST00000558211 PHLPP2Q6ZVD8 1323 aa13.17□□□□□ -0.3
HMGB1P8-201ENST00000558211 CEP290O15078 2479 aa13.17□□□□□ -0.3
HMGB1P8-201ENST00000558211 SOBPA7XYQ1 873 aa13.17□□□□□ -0.3
HMGB1P8-201ENST00000558211 ACKR2O00590 384 aa13.17□□□□□ -0.3
HMGB1P8-201ENST00000558211 MGEA5O60502 916 aa13.17□□□□□ -0.3
HMGB1P8-201ENST00000558211 TSPAN1O60635 241 aa13.17□□□□□ -0.3
HMGB1P8-201ENST00000558211 EDN1P05305 212 aa13.17□□□□□ -0.3
HMGB1P8-201ENST00000558211 PFKMP08237 780 aa13.17□□□□□ -0.3
HMGB1P8-201ENST00000558211 ACTN1P12814 892 aa13.17□□□□□ -0.3
HMGB1P8-201ENST00000558211 ARF4P18085 180 aaPredicted RBP13.17□□□□□ -0.3
HMGB1P8-201ENST00000558211 STK4Q13043 487 aa13.17□□□□□ -0.3
HMGB1P8-201ENST00000558211 PSMD2Q13200 908 aa13.17□□□□□ -0.3
HMGB1P8-201ENST00000558211 IKBKEQ14164 716 aa13.17□□□□□ -0.3
HMGB1P8-201ENST00000558211 TMEM240Q5SV17 173 aa13.17□□□□□ -0.3
HMGB1P8-201ENST00000558211 L1TD1Q5T7N2 865 aaKnown RBP13.17□□□□□ -0.3
HMGB1P8-201ENST00000558211 NT5DC1Q5TFE4 455 aa13.17□□□□□ -0.3
HMGB1P8-201ENST00000558211 TWF2Q6IBS0 349 aaKnown RBP13.17□□□□□ -0.3
HMGB1P8-201ENST00000558211 CAVIN1Q6NZI2 390 aaKnown RBP13.17□□□□□ -0.3
HMGB1P8-201ENST00000558211 NELFCDQ8IXH7 590 aa13.17□□□□□ -0.3
HMGB1P8-201ENST00000558211 SYCP3Q8IZU3 236 aa13.17□□□□□ -0.3
HMGB1P8-201ENST00000558211 SLC17A8Q8NDX2 589 aa13.17□□□□□ -0.3
HMGB1P8-201ENST00000558211 APBB2Q92870 758 aa13.17□□□□□ -0.3
HMGB1P8-201ENST00000558211 ADAM2Q99965 735 aa13.17□□□□□ -0.3
HMGB1P8-201ENST00000558211 TARS2Q9BW92 718 aaKnown RBP13.17□□□□□ -0.3
HMGB1P8-201ENST00000558211 UBE2OQ9C0C9 1292 aaKnown RBP13.17□□□□□ -0.3
HMGB1P8-201ENST00000558211 GRIP2Q9C0E4 1043 aa13.17□□□□□ -0.3
HMGB1P8-201ENST00000558211 VRTNQ9H8Y1 702 aa13.17□□□□□ -0.3
HMGB1P8-201ENST00000558211 DNAAF2Q9NVR5 837 aaKnown RBP13.17□□□□□ -0.3
HMGB1P8-201ENST00000558211 RMND1Q9NWS8 449 aa13.17□□□□□ -0.3
HMGB1P8-201ENST00000558211 MAN1B1Q9UKM7 699 aa13.17□□□□□ -0.3
HMGB1P8-201ENST00000558211 MAPK8IP1Q9UQF2 711 aa13.17□□□□□ -0.3
HMGB1P8-201ENST00000558211 GDAQ9Y2T3 454 aa13.17□□□□□ -0.3
HMGB1P8-201ENST00000558211 RHOBTB3O94955 611 aa13.16□□□□□ -0.3
HMGB1P8-201ENST00000558211 MATR3P43243 847 aaKnown RBP eCLIP13.16□□□□□ -0.3
HMGB1P8-201ENST00000558211 GTF2BQ00403 316 aa13.16□□□□□ -0.3
HMGB1P8-201ENST00000558211 EHHADHQ08426 723 aa13.16□□□□□ -0.3
HMGB1P8-201ENST00000558211 KCNA1Q09470 495 aa13.16□□□□□ -0.3
HMGB1P8-201ENST00000558211 KCNB1Q14721 858 aa13.16□□□□□ -0.3
HMGB1P8-201ENST00000558211 FAM187BQ17R55 369 aa13.16□□□□□ -0.3
HMGB1P8-201ENST00000558211 PSRC1Q6PGN9 363 aaPredicted RBP13.16□□□□□ -0.3
HMGB1P8-201ENST00000558211 STXBP4Q6ZWJ1 553 aa13.16□□□□□ -0.3
HMGB1P8-201ENST00000558211 RTN4RL1Q86UN2 441 aaPredicted RBP13.16□□□□□ -0.3
HMGB1P8-201ENST00000558211 SMYD4Q8IYR2 804 aaPredicted RBP13.16□□□□□ -0.3
HMGB1P8-201ENST00000558211 SIX5Q8N196 739 aa13.16□□□□□ -0.3
HMGB1P8-201ENST00000558211 KIAA0895Q8NCT3 520 aa13.16□□□□□ -0.3
HMGB1P8-201ENST00000558211 PRIMPOLQ96LW4 560 aa13.16□□□□□ -0.3
HMGB1P8-201ENST00000558211 GSDMAQ96QA5 445 aa13.16□□□□□ -0.3
HMGB1P8-201ENST00000558211 ACCSQ96QU6 501 aa13.16□□□□□ -0.3
HMGB1P8-201ENST00000558211 TCHPQ9BT92 498 aa13.16□□□□□ -0.3
HMGB1P8-201ENST00000558211 MRPL4Q9BYD3 311 aaKnown RBP13.16□□□□□ -0.3
HMGB1P8-201ENST00000558211 IKZF4Q9H2S9 585 aa13.16□□□□□ -0.3
HMGB1P8-201ENST00000558211 AGPAT5Q9NUQ2 364 aa13.16□□□□□ -0.3
HMGB1P8-201ENST00000558211 MICAL3Q7RTP6 2002 aa13.15□□□□□ -0.3
HMGB1P8-201ENST00000558211 ENPP3O14638 875 aa13.15□□□□□ -0.3
HMGB1P8-201ENST00000558211 MAN1A2O60476 641 aa13.15□□□□□ -0.3
HMGB1P8-201ENST00000558211 HARSP12081 509 aaKnown RBP13.15□□□□□ -0.3
HMGB1P8-201ENST00000558211 AXLP30530 894 aa13.15□□□□□ -0.3
HMGB1P8-201ENST00000558211 HOXA11P31270 313 aaPredicted RBP13.15□□□□□ -0.3
HMGB1P8-201ENST00000558211 SARSP49591 514 aaKnown RBP13.15□□□□□ -0.3
HMGB1P8-201ENST00000558211 LIG4P49917 911 aa13.15□□□□□ -0.3
HMGB1P8-201ENST00000558211 CENPCQ03188 943 aa13.15□□□□□ -0.3
HMGB1P8-201ENST00000558211 PCBP1Q15365 356 aaKnown RBP eCLIP13.15□□□□□ -0.3
HMGB1P8-201ENST00000558211 CRTC2Q53ET0 693 aaPredicted RBP13.15□□□□□ -0.3
HMGB1P8-201ENST00000558211 C9orf50Q5SZB4 431 aa13.15□□□□□ -0.3
HMGB1P8-201ENST00000558211 CCDC183Q5T5S1 534 aa13.15□□□□□ -0.3
HMGB1P8-201ENST00000558211 ATF7IP2Q5U623 682 aa13.15□□□□□ -0.3
HMGB1P8-201ENST00000558211 EEF1DP3Q658K8 133 aa13.15□□□□□ -0.3
HMGB1P8-201ENST00000558211 NOTUMQ6P988 496 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms