RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 TMCO2Q7Z6W1 182 aaPredicted RBP11.39□□□□□ -0.59
LRRC28-204ENST00000558172 NT5DC4Q86YG4 428 aa11.39□□□□□ -0.59
LRRC28-204ENST00000558172 TMEM192Q8IY95 271 aa11.39□□□□□ -0.59
LRRC28-204ENST00000558172 LRRC43Q8N309 656 aa11.39□□□□□ -0.59
LRRC28-204ENST00000558172 FIBCD1Q8N539 461 aa11.39□□□□□ -0.59
LRRC28-204ENST00000558172 SAAL1Q96ER3 474 aa11.39□□□□□ -0.59
LRRC28-204ENST00000558172 SNX27Q96L92 541 aa11.39□□□□□ -0.59
LRRC28-204ENST00000558172 GAD1Q99259 594 aa11.39□□□□□ -0.59
LRRC28-204ENST00000558172 FAM213AQ9BRX8 229 aa11.39□□□□□ -0.59
LRRC28-204ENST00000558172 KLK14Q9P0G3 267 aa11.39□□□□□ -0.59
LRRC28-204ENST00000558172 CNTN3Q9P232 1028 aa11.39□□□□□ -0.59
LRRC28-204ENST00000558172 RANBP2P49792 3224 aaKnown RBP11.38□□□□□ -0.59
LRRC28-204ENST00000558172 TTC26A0AVF1 554 aa11.38□□□□□ -0.59
LRRC28-204ENST00000558172 GOLGA8IPA6NC78 632 aa11.38□□□□□ -0.59
LRRC28-204ENST00000558172 GOLGA8JA6NMD2 632 aa11.38□□□□□ -0.59
LRRC28-204ENST00000558172 GRXCR1A8MXD5 290 aa11.38□□□□□ -0.59
LRRC28-204ENST00000558172 XPOTO43592 962 aaKnown RBP11.38□□□□□ -0.59
LRRC28-204ENST00000558172 THP07101 528 aa11.38□□□□□ -0.59
LRRC28-204ENST00000558172 CCDC192P0DO97 292 aa11.38□□□□□ -0.59
LRRC28-204ENST00000558172 CXCL8P10145 99 aa11.38□□□□□ -0.59
LRRC28-204ENST00000558172 KCNE1P15382 129 aa11.38□□□□□ -0.59
LRRC28-204ENST00000558172 PSMC2P35998 433 aaKnown RBP11.38□□□□□ -0.59
LRRC28-204ENST00000558172 RNASELQ05823 741 aaKnown RBP11.38□□□□□ -0.59
LRRC28-204ENST00000558172 TYRO3Q06418 890 aa11.38□□□□□ -0.59
LRRC28-204ENST00000558172 GRIK3Q13003 919 aa11.38□□□□□ -0.59
LRRC28-204ENST00000558172 ENOX2Q16206 610 aaKnown RBP11.38□□□□□ -0.59
LRRC28-204ENST00000558172 SNRNP35Q16560 246 aaKnown RBP11.38□□□□□ -0.59
LRRC28-204ENST00000558172 DPCR1Q3MIW9 517 aa11.38□□□□□ -0.59
LRRC28-204ENST00000558172 ZBTB41Q5SVQ8 909 aa11.38□□□□□ -0.59
LRRC28-204ENST00000558172 USP37Q86T82 979 aa11.38□□□□□ -0.59
LRRC28-204ENST00000558172 BRSK2Q8IWQ3 736 aa11.38□□□□□ -0.59
LRRC28-204ENST00000558172 ZC3H3Q8IXZ2 948 aaKnown RBP11.38□□□□□ -0.59
LRRC28-204ENST00000558172 GSTCDQ8NEC7 633 aa11.38□□□□□ -0.59
LRRC28-204ENST00000558172 NOC3LQ8WTT2 800 aaKnown RBP11.38□□□□□ -0.59
LRRC28-204ENST00000558172 ZFP42Q96MM3 310 aa11.38□□□□□ -0.59
LRRC28-204ENST00000558172 CEP63Q96MT8 703 aa11.38□□□□□ -0.59
LRRC28-204ENST00000558172 SAMD11Q96NU1 681 aa11.38□□□□□ -0.59
LRRC28-204ENST00000558172 FAM193BQ96PV7 902 aaPredicted RBP11.38□□□□□ -0.59
LRRC28-204ENST00000558172 MKNK1Q9BUB5 465 aa11.38□□□□□ -0.59
LRRC28-204ENST00000558172 PBX4Q9BYU1 374 aa11.38□□□□□ -0.59
LRRC28-204ENST00000558172 NAT10Q9H0A0 1025 aaKnown RBP11.38□□□□□ -0.59
LRRC28-204ENST00000558172 AAASQ9NRG9 546 aa11.38□□□□□ -0.59
LRRC28-204ENST00000558172 SLC38A7Q9NVC3 462 aa11.38□□□□□ -0.59
LRRC28-204ENST00000558172 RBAKQ9NYW8 714 aaPredicted RBP11.38□□□□□ -0.59
LRRC28-204ENST00000558172 CTNND2Q9UQB3 1225 aa11.38□□□□□ -0.59
LRRC28-204ENST00000558172 INPP5FQ9Y2H2 1132 aa11.38□□□□□ -0.59
LRRC28-204ENST00000558172 DERAQ9Y315 318 aa11.38□□□□□ -0.59
LRRC28-204ENST00000558172 RWDD3Q9Y3V2 267 aa11.38□□□□□ -0.59
LRRC28-204ENST00000558172 SMIM28A0A1B0GU29 152 aa11.37□□□□□ -0.59
LRRC28-204ENST00000558172 SYCE3A1L190 88 aa11.37□□□□□ -0.59
LRRC28-204ENST00000558172 TRIM49BA6NDI0 452 aa11.37□□□□□ -0.59
LRRC28-204ENST00000558172 LACTBL1A8MY62 500 aa11.37□□□□□ -0.59
LRRC28-204ENST00000558172 POMCP01189 267 aa11.37□□□□□ -0.59
LRRC28-204ENST00000558172 CYP3A5P20815 502 aa11.37□□□□□ -0.59
LRRC28-204ENST00000558172 GATMP50440 423 aa11.37□□□□□ -0.59
LRRC28-204ENST00000558172 SCNN1GP51170 649 aa11.37□□□□□ -0.59
LRRC28-204ENST00000558172 RABGGTBP53611 331 aa11.37□□□□□ -0.59
LRRC28-204ENST00000558172 PMS1P54277 932 aaKnown RBP11.37□□□□□ -0.59
LRRC28-204ENST00000558172 STX17P56962 302 aa11.37□□□□□ -0.59
LRRC28-204ENST00000558172 ENPEPQ07075 957 aa11.37□□□□□ -0.59
LRRC28-204ENST00000558172 PAN2Q504Q3 1202 aaKnown RBP11.37□□□□□ -0.59
LRRC28-204ENST00000558172 SPOUT1Q5T280 376 aaKnown RBP11.37□□□□□ -0.59
LRRC28-204ENST00000558172 CEP135Q66GS9 1140 aa11.37□□□□□ -0.59
LRRC28-204ENST00000558172 FAM109BQ6ICB4 259 aaPredicted RBP11.37□□□□□ -0.59
LRRC28-204ENST00000558172 TTI2Q6NXR4 508 aa11.37□□□□□ -0.59
LRRC28-204ENST00000558172 FILIP1Q7Z7B0 1213 aa11.37□□□□□ -0.59
LRRC28-204ENST00000558172 CBWD2Q8IUF1 395 aa11.37□□□□□ -0.59
LRRC28-204ENST00000558172 RDH13Q8NBN7 331 aa11.37□□□□□ -0.59
LRRC28-204ENST00000558172 CACTINQ8WUQ7 758 aaKnown RBP11.37□□□□□ -0.59
LRRC28-204ENST00000558172 FAM212AQ96EL1 285 aa11.37□□□□□ -0.59
LRRC28-204ENST00000558172 MFSD14AQ96MC6 490 aa11.37□□□□□ -0.59
LRRC28-204ENST00000558172 TMEM175Q9BSA9 504 aa11.37□□□□□ -0.59
LRRC28-204ENST00000558172 TBC1D13Q9NVG8 400 aa11.37□□□□□ -0.59
LRRC28-204ENST00000558172 MIOSQ9NXC5 875 aa11.37□□□□□ -0.59
LRRC28-204ENST00000558172 C2CD2Q9Y426 696 aa11.37□□□□□ -0.59
LRRC28-204ENST00000558172 PTGESO14684 152 aa11.36□□□□□ -0.59
LRRC28-204ENST00000558172 SLC16A3O15427 465 aaKnown RBP11.36□□□□□ -0.59
LRRC28-204ENST00000558172 CAVIN2O95810 425 aa11.36□□□□□ -0.59
LRRC28-204ENST00000558172 GNA14O95837 355 aa11.36□□□□□ -0.59
LRRC28-204ENST00000558172 ALDH2P05091 517 aa11.36□□□□□ -0.59
LRRC28-204ENST00000558172 EPB41P11171 864 aaKnown RBP11.36□□□□□ -0.59
LRRC28-204ENST00000558172 LAG3P18627 525 aa11.36□□□□□ -0.59
LRRC28-204ENST00000558172 CASP4P49662 377 aa11.36□□□□□ -0.59
LRRC28-204ENST00000558172 AP3M2P53677 418 aa11.36□□□□□ -0.59
LRRC28-204ENST00000558172 CYP24A1Q07973 514 aa11.36□□□□□ -0.59
LRRC28-204ENST00000558172 TUSC3Q13454 348 aa11.36□□□□□ -0.59
LRRC28-204ENST00000558172 PSMD6Q15008 389 aa11.36□□□□□ -0.59
LRRC28-204ENST00000558172 ZBTB6Q15916 424 aa11.36□□□□□ -0.59
LRRC28-204ENST00000558172 TPD52L1Q16890 204 aaPredicted RBP11.36□□□□□ -0.59
LRRC28-204ENST00000558172 ZSCAN23Q3MJ62 389 aa11.36□□□□□ -0.59
LRRC28-204ENST00000558172 LRRC55Q6ZSA7 311 aa11.36□□□□□ -0.59
LRRC28-204ENST00000558172 INTS8Q75QN2 995 aaKnown RBP11.36□□□□□ -0.59
LRRC28-204ENST00000558172 FAM186BQ8IYM0 893 aa11.36□□□□□ -0.59
LRRC28-204ENST00000558172 CSGALNACT2Q8N6G5 542 aa11.36□□□□□ -0.59
LRRC28-204ENST00000558172 ZSWIM2Q8NEG5 633 aa11.36□□□□□ -0.59
LRRC28-204ENST00000558172 CLP1Q92989 425 aaKnown RBP11.36□□□□□ -0.59
LRRC28-204ENST00000558172 KIF12Q96FN5 646 aa11.36□□□□□ -0.59
LRRC28-204ENST00000558172 UROC1Q96N76 676 aa11.36□□□□□ -0.59
LRRC28-204ENST00000558172 PPP1R10Q96QC0 940 aaKnown RBP11.36□□□□□ -0.59
LRRC28-204ENST00000558172 FNBP1Q96RU3 617 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms