RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 PATJQ8NI35 1801 aa5.78□□□□□ -1.48
SPG11-208ENST00000558155 DCHS1Q96JQ0 3298 aa5.78□□□□□ -1.48
SPG11-208ENST00000558155 EPG5Q9HCE0 2579 aa5.77□□□□□ -1.49
SPG11-208ENST00000558155 TMEM150BA6NC51 233 aa5.77□□□□□ -1.49
SPG11-208ENST00000558155 CCL16O15467 120 aa5.77□□□□□ -1.49
SPG11-208ENST00000558155 POU2F2P09086 479 aa5.77□□□□□ -1.49
SPG11-208ENST00000558155 PTPN2P17706 415 aa5.77□□□□□ -1.49
SPG11-208ENST00000558155 CDC27P30260 824 aa5.77□□□□□ -1.49
SPG11-208ENST00000558155 ADD1P35611 737 aaKnown RBP5.77□□□□□ -1.49
SPG11-208ENST00000558155 MLH1P40692 756 aa5.77□□□□□ -1.49
SPG11-208ENST00000558155 RFC5P40937 340 aa5.77□□□□□ -1.49
SPG11-208ENST00000558155 QARSP47897 775 aaKnown RBP5.77□□□□□ -1.49
SPG11-208ENST00000558155 SCNN1GP51170 649 aa5.77□□□□□ -1.49
SPG11-208ENST00000558155 FGD1P98174 961 aa5.77□□□□□ -1.49
SPG11-208ENST00000558155 EXOSC10Q01780 885 aaKnown RBP5.77□□□□□ -1.49
SPG11-208ENST00000558155 POU5F1BQ06416 359 aa5.77□□□□□ -1.49
SPG11-208ENST00000558155 ELAVL2Q12926 359 aaKnown RBP5.77□□□□□ -1.49
SPG11-208ENST00000558155 GRIK3Q13003 919 aa5.77□□□□□ -1.49
SPG11-208ENST00000558155 COL9A2Q14055 689 aaPredicted RBP5.77□□□□□ -1.49
SPG11-208ENST00000558155 TFDP1Q14186 410 aa5.77□□□□□ -1.49
SPG11-208ENST00000558155 MXD4Q14582 209 aaPredicted RBP5.77□□□□□ -1.49
SPG11-208ENST00000558155 Q4G0T1 1027 aa5.77□□□□□ -1.49
SPG11-208ENST00000558155 PABPC1LQ4VXU2 614 aaKnown RBP5.77□□□□□ -1.49
SPG11-208ENST00000558155 AXDND1Q5T1B0 1012 aaPredicted RBP5.77□□□□□ -1.49
SPG11-208ENST00000558155 FAM171A1Q5VUB5 890 aa5.77□□□□□ -1.49
SPG11-208ENST00000558155 PRSS55Q6UWB4 352 aaPredicted RBP5.77□□□□□ -1.49
SPG11-208ENST00000558155 PRR23CQ6ZRP0 262 aa5.77□□□□□ -1.49
SPG11-208ENST00000558155 ANO5Q75V66 913 aa5.77□□□□□ -1.49
SPG11-208ENST00000558155 RNF149Q8NC42 400 aa5.77□□□□□ -1.49
SPG11-208ENST00000558155 CCDC148Q8NFR7 591 aa5.77□□□□□ -1.49
SPG11-208ENST00000558155 LNX1Q8TBB1 728 aaPredicted RBP5.77□□□□□ -1.49
SPG11-208ENST00000558155 DNASE1L2Q92874 299 aa5.77□□□□□ -1.49
SPG11-208ENST00000558155 IRF7Q92985 503 aa5.77□□□□□ -1.49
SPG11-208ENST00000558155 TMEM143Q96AN5 459 aa5.77□□□□□ -1.49
SPG11-208ENST00000558155 ELSPBP1Q96BH3 223 aa5.77□□□□□ -1.49
SPG11-208ENST00000558155 MCRS1Q96EZ8 462 aa5.77□□□□□ -1.49
SPG11-208ENST00000558155 CEP170P1Q96L14 293 aa5.77□□□□□ -1.49
SPG11-208ENST00000558155 B3GALT6Q96L58 329 aa5.77□□□□□ -1.49
SPG11-208ENST00000558155 TRMT61BQ9BVS5 477 aaKnown RBP5.77□□□□□ -1.49
SPG11-208ENST00000558155 APOL6Q9BWW8 343 aa5.77□□□□□ -1.49
SPG11-208ENST00000558155 EIF2AQ9BY44 585 aaKnown RBP5.77□□□□□ -1.49
SPG11-208ENST00000558155 LSG1Q9H089 658 aaKnown RBP5.77□□□□□ -1.49
SPG11-208ENST00000558155 SLKQ9H2G2 1235 aaPredicted RBP5.77□□□□□ -1.49
SPG11-208ENST00000558155 CHRDQ9H2X0 955 aa5.77□□□□□ -1.49
SPG11-208ENST00000558155 BRD9Q9H8M2 597 aa5.77□□□□□ -1.49
SPG11-208ENST00000558155 MINDY3Q9H8M7 445 aa5.77□□□□□ -1.49
SPG11-208ENST00000558155 ZFP14Q9HCL3 533 aa5.77□□□□□ -1.49
SPG11-208ENST00000558155 HEBP1Q9NRV9 189 aa5.77□□□□□ -1.49
SPG11-208ENST00000558155 DNMT3BQ9UBC3 853 aaKnown RBP5.77□□□□□ -1.49
SPG11-208ENST00000558155 PARP2Q9UGN5 583 aa5.77□□□□□ -1.49
SPG11-208ENST00000558155 NDRG2Q9UN36 371 aaKnown RBP5.77□□□□□ -1.49
SPG11-208ENST00000558155 MRPS23Q9Y3D9 190 aaKnown RBP5.77□□□□□ -1.49
SPG11-208ENST00000558155 HES2Q9Y543 173 aa5.77□□□□□ -1.49
SPG11-208ENST00000558155 MAP1BP46821 2468 aaKnown RBP5.77□□□□□ -1.49
SPG11-208ENST00000558155 SF3B1O75533 1304 aaKnown RBP eCLIP5.76□□□□□ -1.49
SPG11-208ENST00000558155 CYP3A7-CYP3A51PA0A087WV96 503 aa5.76□□□□□ -1.49
SPG11-208ENST00000558155 KLF18A0A0U1RQI7 1052 aa5.76□□□□□ -1.49
SPG11-208ENST00000558155 PPP1R3GB7ZBB8 358 aa5.76□□□□□ -1.49
SPG11-208ENST00000558155 F8W810 466 aa5.76□□□□□ -1.49
SPG11-208ENST00000558155 INO80B-WBP1J3KQ70 363 aa5.76□□□□□ -1.49
SPG11-208ENST00000558155 ZNF197O14709 1029 aa5.76□□□□□ -1.49
SPG11-208ENST00000558155 ADAMTS3O15072 1205 aa5.76□□□□□ -1.49
SPG11-208ENST00000558155 EDIL3O43854 480 aa5.76□□□□□ -1.49
SPG11-208ENST00000558155 PROS1P07225 676 aa5.76□□□□□ -1.49
SPG11-208ENST00000558155 P4HBP07237 508 aaKnown RBP5.76□□□□□ -1.49
SPG11-208ENST00000558155 TDGF1P13385 188 aa5.76□□□□□ -1.49
SPG11-208ENST00000558155 CYP3A7P24462 503 aa5.76□□□□□ -1.49
SPG11-208ENST00000558155 PMLP29590 882 aa5.76□□□□□ -1.49
SPG11-208ENST00000558155 OR1D2P34982 312 aa5.76□□□□□ -1.49
SPG11-208ENST00000558155 LIMK1P53667 647 aa5.76□□□□□ -1.49
SPG11-208ENST00000558155 NPEPPSP55786 919 aa5.76□□□□□ -1.49
SPG11-208ENST00000558155 NLRP5P59047 1200 aa5.76□□□□□ -1.49
SPG11-208ENST00000558155 PTENP60484 403 aa5.76□□□□□ -1.49
SPG11-208ENST00000558155 SHC2P98077 582 aa5.76□□□□□ -1.49
SPG11-208ENST00000558155 SPIRE1Q08AE8 756 aa5.76□□□□□ -1.49
SPG11-208ENST00000558155 RAB33AQ14088 237 aa5.76□□□□□ -1.49
SPG11-208ENST00000558155 HSP90AA2PQ14568 343 aaPredicted RBP5.76□□□□□ -1.49
SPG11-208ENST00000558155 PSMD5Q16401 504 aa5.76□□□□□ -1.49
SPG11-208ENST00000558155 RTP2Q5QGT7 225 aa5.76□□□□□ -1.49
SPG11-208ENST00000558155 N4BP2L1Q5TBK1 243 aaPredicted RBP5.76□□□□□ -1.49
SPG11-208ENST00000558155 PLA2G4FQ68DD2 849 aa5.76□□□□□ -1.49
SPG11-208ENST00000558155 TANGO2Q6ICL3 276 aa5.76□□□□□ -1.49
SPG11-208ENST00000558155 B3GNT9Q6UX72 402 aa5.76□□□□□ -1.49
SPG11-208ENST00000558155 CEP68Q76N32 757 aa5.76□□□□□ -1.49
SPG11-208ENST00000558155 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.76□□□□□ -1.49
SPG11-208ENST00000558155 FERMT3Q86UX7 667 aa5.76□□□□□ -1.49
SPG11-208ENST00000558155 NPAS3Q8IXF0 933 aa5.76□□□□□ -1.49
SPG11-208ENST00000558155 C12orf50Q8NA57 414 aaPredicted RBP5.76□□□□□ -1.49
SPG11-208ENST00000558155 GSTCDQ8NEC7 633 aa5.76□□□□□ -1.49
SPG11-208ENST00000558155 SLC7A14Q8TBB6 771 aa5.76□□□□□ -1.49
SPG11-208ENST00000558155 TBCKQ8TEA7 893 aa5.76□□□□□ -1.49
SPG11-208ENST00000558155 PIK3R5Q8WYR1 880 aa5.76□□□□□ -1.49
SPG11-208ENST00000558155 FAM3CQ92520 227 aa5.76□□□□□ -1.49
SPG11-208ENST00000558155 RABGGTAQ92696 567 aa5.76□□□□□ -1.49
SPG11-208ENST00000558155 GJA10Q969M2 543 aa5.76□□□□□ -1.49
SPG11-208ENST00000558155 CPB2Q96IY4 423 aa5.76□□□□□ -1.49
SPG11-208ENST00000558155 ZFP42Q96MM3 310 aa5.76□□□□□ -1.49
SPG11-208ENST00000558155 PLA2G2FQ9BZM2 168 aa5.76□□□□□ -1.49
SPG11-208ENST00000558155 DHX33Q9H6R0 707 aaKnown RBP5.76□□□□□ -1.49
SPG11-208ENST00000558155 TRPV5Q9NQA5 729 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms