RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 GOLGA8IPA6NC78 632 aa13.45□□□□□ -0.26
TPM1-209ENST00000558072 GOLGA8JA6NMD2 632 aa13.45□□□□□ -0.26
TPM1-209ENST00000558072 EVI5O60447 810 aa13.45□□□□□ -0.26
TPM1-209ENST00000558072 MGEA5O60502 916 aa13.45□□□□□ -0.26
TPM1-209ENST00000558072 TNNC2P02585 160 aa13.45□□□□□ -0.26
TPM1-209ENST00000558072 ITGA4P13612 1032 aa13.45□□□□□ -0.26
TPM1-209ENST00000558072 ATP1A3P13637 1013 aa13.45□□□□□ -0.26
TPM1-209ENST00000558072 CSF2RAP15509 400 aa13.45□□□□□ -0.26
TPM1-209ENST00000558072 TNNI1P19237 187 aa13.45□□□□□ -0.26
TPM1-209ENST00000558072 ACOT2P49753 483 aa13.45□□□□□ -0.26
TPM1-209ENST00000558072 EPHB4P54760 987 aa13.45□□□□□ -0.26
TPM1-209ENST00000558072 CLDN10P78369 228 aa13.45□□□□□ -0.26
TPM1-209ENST00000558072 UBXN1Q04323 297 aa13.45□□□□□ -0.26
TPM1-209ENST00000558072 KCNH2Q12809 1159 aa13.45□□□□□ -0.26
TPM1-209ENST00000558072 TRIM14Q14142 442 aa13.45□□□□□ -0.26
TPM1-209ENST00000558072 NR1I3Q14994 352 aa13.45□□□□□ -0.26
TPM1-209ENST00000558072 DUOXA2Q1HG44 320 aa13.45□□□□□ -0.26
TPM1-209ENST00000558072 EEF1DP3Q658K8 133 aa13.45□□□□□ -0.26
TPM1-209ENST00000558072 KRT39Q6A163 491 aa13.45□□□□□ -0.26
TPM1-209ENST00000558072 MRPL10Q7Z7H8 261 aaKnown RBP13.45□□□□□ -0.26
TPM1-209ENST00000558072 CBWD2Q8IUF1 395 aa13.45□□□□□ -0.26
TPM1-209ENST00000558072 FMNL3Q8IVF7 1028 aa13.45□□□□□ -0.26
TPM1-209ENST00000558072 BADQ92934 168 aa13.45□□□□□ -0.26
TPM1-209ENST00000558072 ANKRD36BP1Q96IX9 119 aa13.45□□□□□ -0.26
TPM1-209ENST00000558072 VPS16Q9H269 839 aa13.45□□□□□ -0.26
TPM1-209ENST00000558072 ELAC1Q9H777 363 aaKnown RBP13.45□□□□□ -0.26
TPM1-209ENST00000558072 RGS18Q9NS28 235 aa13.45□□□□□ -0.26
TPM1-209ENST00000558072 TAB2Q9NYJ8 693 aa13.45□□□□□ -0.26
TPM1-209ENST00000558072 C2CD2Q9Y426 696 aa13.45□□□□□ -0.26
TPM1-209ENST00000558072 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.45□□□□□ -0.266e-8■□□□□ 10.6
TPM1-209ENST00000558072 CARNS1A5YM72 827 aa13.44□□□□□ -0.26
TPM1-209ENST00000558072 FAM189A1O60320 539 aa13.44□□□□□ -0.26
TPM1-209ENST00000558072 ADRB2P07550 413 aa13.44□□□□□ -0.26
TPM1-209ENST00000558072 PAX3P23760 479 aa13.44□□□□□ -0.26
TPM1-209ENST00000558072 ZNF75DP51815 510 aa13.44□□□□□ -0.26
TPM1-209ENST00000558072 PPIGQ13427 754 aaKnown RBP eCLIP13.44□□□□□ -0.261e-10■■□□□ 13.1
TPM1-209ENST00000558072 IKBKEQ14164 716 aa13.44□□□□□ -0.26
TPM1-209ENST00000558072 DSC3Q14574 896 aa13.44□□□□□ -0.26
TPM1-209ENST00000558072 HSP90AA4PQ58FG1 418 aa13.44□□□□□ -0.26
TPM1-209ENST00000558072 MFSD5Q6N075 450 aa13.44□□□□□ -0.26
TPM1-209ENST00000558072 CNKSR3Q6P9H4 555 aa13.44□□□□□ -0.26
TPM1-209ENST00000558072 CRELD2Q6UXH1 353 aaPredicted RBP13.44□□□□□ -0.26
TPM1-209ENST00000558072 GBP6Q6ZN66 633 aa13.44□□□□□ -0.26
TPM1-209ENST00000558072 ZSWIM2Q8NEG5 633 aa13.44□□□□□ -0.26
TPM1-209ENST00000558072 LINC01599Q8WXQ3 324 aa13.44□□□□□ -0.26
TPM1-209ENST00000558072 SLC35C1Q96A29 364 aa13.44□□□□□ -0.26
TPM1-209ENST00000558072 EEF2KMTQ96G04 330 aa13.44□□□□□ -0.26
TPM1-209ENST00000558072 CGRRF1Q99675 332 aa13.44□□□□□ -0.26
TPM1-209ENST00000558072 ADAM2Q99965 735 aa13.44□□□□□ -0.26
TPM1-209ENST00000558072 XPO4Q9C0E2 1151 aaKnown RBP13.44□□□□□ -0.26
TPM1-209ENST00000558072 TSPYL2Q9H2G4 693 aaPredicted RBP13.44□□□□□ -0.26
TPM1-209ENST00000558072 TMX1Q9H3N1 280 aa13.44□□□□□ -0.26
TPM1-209ENST00000558072 TMEM8AQ9HCN3 771 aa13.44□□□□□ -0.26
TPM1-209ENST00000558072 SLC38A7Q9NVC3 462 aa13.44□□□□□ -0.26
TPM1-209ENST00000558072 KANSL3Q9P2N6 904 aa13.44□□□□□ -0.26
TPM1-209ENST00000558072 PCDHB2Q9Y5E7 798 aa13.44□□□□□ -0.26
TPM1-209ENST00000558072 ITIH6Q6UXX5 1313 aa13.43□□□□□ -0.26
TPM1-209ENST00000558072 PTPRSQ13332 1948 aa13.43□□□□□ -0.26
TPM1-209ENST00000558072 ABHD14A-ACY1A0A1B0GW23 586 aa13.43□□□□□ -0.26
TPM1-209ENST00000558072 ADCY5O95622 1261 aa13.43□□□□□ -0.26
TPM1-209ENST00000558072 TMEM191BP0C7N4 346 aa13.43□□□□□ -0.26
TPM1-209ENST00000558072 DLATP10515 647 aaKnown RBP13.43□□□□□ -0.26
TPM1-209ENST00000558072 RFX1P22670 979 aa13.43□□□□□ -0.26
TPM1-209ENST00000558072 MXI1P50539 228 aa13.43□□□□□ -0.26
TPM1-209ENST00000558072 DRC7Q8IY82 874 aa13.43□□□□□ -0.26
TPM1-209ENST00000558072 CCDC127Q96BQ5 260 aa13.43□□□□□ -0.26
TPM1-209ENST00000558072 FAXDC2Q96IV6 333 aa13.43□□□□□ -0.26
TPM1-209ENST00000558072 ERGIC2Q96RQ1 377 aa13.43□□□□□ -0.26
TPM1-209ENST00000558072 RPS6KC1Q96S38 1066 aa13.43□□□□□ -0.26
TPM1-209ENST00000558072 EDEM3Q9BZQ6 932 aa13.43□□□□□ -0.26
TPM1-209ENST00000558072 IMPG2Q9BZV3 1241 aa13.43□□□□□ -0.26
TPM1-209ENST00000558072 HAPLN2Q9GZV7 340 aa13.43□□□□□ -0.26
TPM1-209ENST00000558072 IMPACTQ9P2X3 320 aa13.43□□□□□ -0.26
TPM1-209ENST00000558072 PARP2Q9UGN5 583 aa13.43□□□□□ -0.26
TPM1-209ENST00000558072 IPPQ9Y573 584 aa13.43□□□□□ -0.26
TPM1-209ENST00000558072 TTC26A0AVF1 554 aa13.42□□□□□ -0.26
TPM1-209ENST00000558072 ZC3H11AO75152 810 aaKnown RBP eCLIP13.42□□□□□ -0.26
TPM1-209ENST00000558072 PHACTR2O75167 634 aa13.42□□□□□ -0.26
TPM1-209ENST00000558072 BAIAP3O94812 1187 aa13.42□□□□□ -0.26
TPM1-209ENST00000558072 CYP3A5P20815 502 aa13.42□□□□□ -0.26
TPM1-209ENST00000558072 FMO5P49326 533 aa13.42□□□□□ -0.26
TPM1-209ENST00000558072 FAM189BP81408 668 aa13.42□□□□□ -0.26
TPM1-209ENST00000558072 MYL7Q01449 175 aa13.42□□□□□ -0.26
TPM1-209ENST00000558072 CCDC173Q0VFZ6 552 aa13.42□□□□□ -0.26
TPM1-209ENST00000558072 ENOX2Q16206 610 aaKnown RBP13.42□□□□□ -0.26
TPM1-209ENST00000558072 EXOC3L4Q17RC7 722 aa13.42□□□□□ -0.26
TPM1-209ENST00000558072 SEZ6Q53EL9 994 aa13.42□□□□□ -0.26
TPM1-209ENST00000558072 MIIPQ5JXC2 388 aa13.42□□□□□ -0.26
TPM1-209ENST00000558072 UBXN11Q5T124 520 aa13.42□□□□□ -0.26
TPM1-209ENST00000558072 SPECC1LQ69YQ0 1117 aa13.42□□□□□ -0.26
TPM1-209ENST00000558072 APTXQ7Z2E3 356 aaKnown RBP13.42□□□□□ -0.26
TPM1-209ENST00000558072 TMCO2Q7Z6W1 182 aaPredicted RBP13.42□□□□□ -0.26
TPM1-209ENST00000558072 ZNF397Q8NF99 534 aaPredicted RBP13.42□□□□□ -0.26
TPM1-209ENST00000558072 DBF4BQ8NFT6 615 aa13.42□□□□□ -0.26
TPM1-209ENST00000558072 BEST2Q8NFU1 509 aa13.42□□□□□ -0.26
TPM1-209ENST00000558072 FAM212AQ96EL1 285 aa13.42□□□□□ -0.26
TPM1-209ENST00000558072 PCMTD1Q96MG8 357 aaPredicted RBP13.42□□□□□ -0.26
TPM1-209ENST00000558072 MTIF3Q9H2K0 278 aaKnown RBP13.42□□□□□ -0.26
TPM1-209ENST00000558072 TMEM161AQ9NX61 479 aa13.42□□□□□ -0.26
TPM1-209ENST00000558072 SNTG2Q9NY99 539 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms