RNA–Protein interactions for RNA: ENST00000557749.5

LINC00648-204, long intergenic non-protein coding RNA 648, humanhuman

TSL 5 BASIC

Gene LINC00648, Length 443 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-204ENST00000557749 CXCL14O95715 111 aa12.55□□□□□ -0.4
LINC00648-204ENST00000557749 C1RP00736 705 aa12.55□□□□□ -0.4
LINC00648-204ENST00000557749 POMCP01189 267 aa12.55□□□□□ -0.4
LINC00648-204ENST00000557749 URODP06132 367 aa12.55□□□□□ -0.4
LINC00648-204ENST00000557749 IL9P15248 144 aa12.55□□□□□ -0.4
LINC00648-204ENST00000557749 SLC11A1P49279 550 aa12.55□□□□□ -0.4
LINC00648-204ENST00000557749 STRN3Q13033 797 aa12.55□□□□□ -0.4
LINC00648-204ENST00000557749 ADGRD2Q7Z7M1 963 aa12.55□□□□□ -0.4
LINC00648-204ENST00000557749 GAD1Q99259 594 aa12.55□□□□□ -0.4
LINC00648-204ENST00000557749 EIF2AQ9BY44 585 aaKnown RBP12.55□□□□□ -0.4
LINC00648-204ENST00000557749 MRPL4Q9BYD3 311 aaKnown RBP12.55□□□□□ -0.4
LINC00648-204ENST00000557749 CCDC113Q9H0I3 377 aa12.55□□□□□ -0.4
LINC00648-204ENST00000557749 ZBP1Q9H171 429 aa12.55□□□□□ -0.4
LINC00648-204ENST00000557749 KMT5AQ9NQR1 393 aa12.55□□□□□ -0.4
LINC00648-204ENST00000557749 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.55□□□□□ -0.4
LINC00648-204ENST00000557749 MRPL17Q9NRX2 175 aaKnown RBP12.55□□□□□ -0.4
LINC00648-204ENST00000557749 PARP2Q9UGN5 583 aa12.55□□□□□ -0.4
LINC00648-204ENST00000557749 ODF2LQ9ULJ1 636 aa12.55□□□□□ -0.4
LINC00648-204ENST00000557749 SPTBN5Q9NRC6 3674 aaKnown RBP12.55□□□□□ -0.4
LINC00648-204ENST00000557749 B4GALT5O43286 388 aa12.54□□□□□ -0.4
LINC00648-204ENST00000557749 SOD2P04179 222 aa12.54□□□□□ -0.4
LINC00648-204ENST00000557749 PBX3P40426 434 aa12.54□□□□□ -0.4
LINC00648-204ENST00000557749 OR1G1P47890 313 aa12.54□□□□□ -0.4
LINC00648-204ENST00000557749 RPIAP49247 311 aa12.54□□□□□ -0.4
LINC00648-204ENST00000557749 YARSP54577 528 aaKnown RBP12.54□□□□□ -0.4
LINC00648-204ENST00000557749 ZP2Q05996 745 aa12.54□□□□□ -0.4
LINC00648-204ENST00000557749 DSC1Q08554 894 aa12.54□□□□□ -0.4
LINC00648-204ENST00000557749 ELAVL2Q12926 359 aaKnown RBP12.54□□□□□ -0.4
LINC00648-204ENST00000557749 ZRSR1Q15695 479 aaKnown RBP12.54□□□□□ -0.4
LINC00648-204ENST00000557749 LONRF3Q496Y0 759 aa12.54□□□□□ -0.4
LINC00648-204ENST00000557749 ATF7IP2Q5U623 682 aa12.54□□□□□ -0.4
LINC00648-204ENST00000557749 KIAA1841Q6NSI8 718 aa12.54□□□□□ -0.4
LINC00648-204ENST00000557749 RINT1Q6NUQ1 792 aa12.54□□□□□ -0.4
LINC00648-204ENST00000557749 ANKRD54Q6NXT1 300 aa12.54□□□□□ -0.4
LINC00648-204ENST00000557749 PDXDC1Q6P996 788 aa12.54□□□□□ -0.4
LINC00648-204ENST00000557749 CABP7Q86V35 215 aa12.54□□□□□ -0.4
LINC00648-204ENST00000557749 SYT2Q8N9I0 419 aaPredicted RBP12.54□□□□□ -0.4
LINC00648-204ENST00000557749 NECAB3Q96P71 396 aaPredicted RBP12.54□□□□□ -0.4
LINC00648-204ENST00000557749 APOL6Q9BWW8 343 aa12.54□□□□□ -0.4
LINC00648-204ENST00000557749 NXF3Q9H4D5 531 aaKnown RBP12.54□□□□□ -0.4
LINC00648-204ENST00000557749 CCDC39Q9UFE4 941 aa12.54□□□□□ -0.4
LINC00648-204ENST00000557749 TNFSF13BQ9Y275 285 aa12.54□□□□□ -0.4
LINC00648-204ENST00000557749 MORC2Q9Y6X9 1032 aaPredicted RBP12.54□□□□□ -0.4
LINC00648-204ENST00000557749 XIRP2A4UGR9 3374 aa12.53□□□□□ -0.4
LINC00648-204ENST00000557749 MEIS3P2A8K0S8 358 aa12.53□□□□□ -0.4
LINC00648-204ENST00000557749 NT5C1B-RDH14C9J2C7 533 aa12.53□□□□□ -0.4
LINC00648-204ENST00000557749 E9PMD0 336 aa12.53□□□□□ -0.4
LINC00648-204ENST00000557749 NRP1O14786 923 aa12.53□□□□□ -0.4
LINC00648-204ENST00000557749 PER2O15055 1255 aa12.53□□□□□ -0.4
LINC00648-204ENST00000557749 LINC01565O15544 149 aa12.53□□□□□ -0.4
LINC00648-204ENST00000557749 HIP1RO75146 1068 aa12.53□□□□□ -0.4
LINC00648-204ENST00000557749 GLP2RO95838 553 aa12.53□□□□□ -0.4
LINC00648-204ENST00000557749 SSBP05455 408 aaKnown RBP eCLIP12.53□□□□□ -0.4
LINC00648-204ENST00000557749 THP07101 528 aa12.53□□□□□ -0.4
LINC00648-204ENST00000557749 ADH1AP07327 375 aa12.53□□□□□ -0.4
LINC00648-204ENST00000557749 HSP90AA1P07900 732 aaKnown RBP12.53□□□□□ -0.4
LINC00648-204ENST00000557749 PLS3P13797 630 aa12.53□□□□□ -0.4
LINC00648-204ENST00000557749 NPTX2P47972 431 aa12.53□□□□□ -0.4
LINC00648-204ENST00000557749 SCNN1GP51170 649 aa12.53□□□□□ -0.4
LINC00648-204ENST00000557749 PEX3P56589 373 aa12.53□□□□□ -0.4
LINC00648-204ENST00000557749 SKOR1P84550 965 aa12.53□□□□□ -0.4
LINC00648-204ENST00000557749 TUSC3Q13454 348 aa12.53□□□□□ -0.4
LINC00648-204ENST00000557749 NR6A1Q15406 480 aa12.53□□□□□ -0.4
LINC00648-204ENST00000557749 ECM1Q16610 540 aa12.53□□□□□ -0.4
LINC00648-204ENST00000557749 KYAT1Q16773 422 aa12.53□□□□□ -0.4
LINC00648-204ENST00000557749 C1orf186Q6ZWK4 172 aa12.53□□□□□ -0.4
LINC00648-204ENST00000557749 ZNF280BQ86YH2 543 aa12.53□□□□□ -0.4
LINC00648-204ENST00000557749 HSCBQ8IWL3 235 aa12.53□□□□□ -0.4
LINC00648-204ENST00000557749 COLGALT2Q8IYK4 626 aa12.53□□□□□ -0.4
LINC00648-204ENST00000557749 SNX21Q969T3 373 aa12.53□□□□□ -0.4
LINC00648-204ENST00000557749 RIPOR3Q96MK2 946 aa12.53□□□□□ -0.4
LINC00648-204ENST00000557749 UROC1Q96N76 676 aa12.53□□□□□ -0.4
LINC00648-204ENST00000557749 NTPCRQ9BSD7 190 aaKnown RBP12.53□□□□□ -0.4
LINC00648-204ENST00000557749 HERC2P3Q9BVR0 1158 aa12.53□□□□□ -0.4
LINC00648-204ENST00000557749 CCDC94Q9BW85 323 aaPredicted RBP12.53□□□□□ -0.4
LINC00648-204ENST00000557749 PHF7Q9BWX1 381 aaPredicted RBP12.53□□□□□ -0.4
LINC00648-204ENST00000557749 PDZD7Q9H5P4 517 aa12.53□□□□□ -0.4
LINC00648-204ENST00000557749 SLC38A7Q9NVC3 462 aa12.53□□□□□ -0.4
LINC00648-204ENST00000557749 CLEC1BQ9P126 229 aa12.53□□□□□ -0.4
LINC00648-204ENST00000557749 ARHGAP28Q9P2N2 729 aa12.53□□□□□ -0.4
LINC00648-204ENST00000557749 DNAJB4Q9UDY4 337 aa12.53□□□□□ -0.4
LINC00648-204ENST00000557749 BARX2Q9UMQ3 279 aaPredicted RBP12.53□□□□□ -0.4
LINC00648-204ENST00000557749 NR2E1Q9Y466 385 aa12.53□□□□□ -0.4
LINC00648-204ENST00000557749 HCFC2Q9Y5Z7 792 aa12.53□□□□□ -0.4
LINC00648-204ENST00000557749 SF3B1O75533 1304 aaKnown RBP eCLIP12.53□□□□□ -0.4
LINC00648-204ENST00000557749 A0A087WWV3 80 aa12.52□□□□□ -0.41
LINC00648-204ENST00000557749 PP2D1A8MPX8 630 aa12.52□□□□□ -0.41
LINC00648-204ENST00000557749 HIDE1A8MVS5 230 aa12.52□□□□□ -0.41
LINC00648-204ENST00000557749 DDHD2O94830 711 aa12.52□□□□□ -0.41
LINC00648-204ENST00000557749 PLA2G4BP0C869 781 aa12.52□□□□□ -0.41
LINC00648-204ENST00000557749 LIG1P18858 919 aa12.52□□□□□ -0.41
LINC00648-204ENST00000557749 GTF2F1P35269 517 aaKnown RBP eCLIP12.52□□□□□ -0.41
LINC00648-204ENST00000557749 MTHFRP42898 656 aa12.52□□□□□ -0.41
LINC00648-204ENST00000557749 GLUD2P49448 558 aa12.52□□□□□ -0.41
LINC00648-204ENST00000557749 DLX2Q07687 328 aaPredicted RBP12.52□□□□□ -0.41
LINC00648-204ENST00000557749 KCNC3Q14003 757 aa12.52□□□□□ -0.41
LINC00648-204ENST00000557749 CBX2Q14781 532 aaPredicted RBP12.52□□□□□ -0.41
LINC00648-204ENST00000557749 SF3A1Q15459 793 aaKnown RBP12.52□□□□□ -0.41
LINC00648-204ENST00000557749 PTPN14Q15678 1187 aa12.52□□□□□ -0.41
LINC00648-204ENST00000557749 CLUL1Q15846 466 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms