RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 TRMT13Q9NUP7 481 aaKnown RBP5.92□□□□□ -1.46
MTHFD1-216ENST00000557539 MYOTQ9UBF9 498 aa5.92□□□□□ -1.46
MTHFD1-216ENST00000557539 L1RE1Q9UN81 338 aa5.92□□□□□ -1.46
MTHFD1-216ENST00000557539 LIMCH1Q9UPQ0 1083 aa5.92□□□□□ -1.46
MTHFD1-216ENST00000557539 TPRP12270 2363 aaKnown RBP5.92□□□□□ -1.46
MTHFD1-216ENST00000557539 NAIPQ13075 1403 aa5.91□□□□□ -1.46
MTHFD1-216ENST00000557539 CAPN8A6NHC0 703 aa5.91□□□□□ -1.46
MTHFD1-216ENST00000557539 CCDC154A6NI56 674 aa5.91□□□□□ -1.46
MTHFD1-216ENST00000557539 HGSO14964 777 aaPredicted RBP5.91□□□□□ -1.46
MTHFD1-216ENST00000557539 USP2O75604 605 aaPredicted RBP5.91□□□□□ -1.46
MTHFD1-216ENST00000557539 MMP10P09238 476 aa5.91□□□□□ -1.46
MTHFD1-216ENST00000557539 ITGB5P18084 799 aa5.91□□□□□ -1.46
MTHFD1-216ENST00000557539 IRX6P78412 446 aaPredicted RBP5.91□□□□□ -1.46
MTHFD1-216ENST00000557539 BIRC3Q13489 604 aa5.91□□□□□ -1.46
MTHFD1-216ENST00000557539 CNN3Q15417 329 aaKnown RBP5.91□□□□□ -1.46
MTHFD1-216ENST00000557539 ALFQ53S48 1182 aa5.91□□□□□ -1.46
MTHFD1-216ENST00000557539 EMC4Q5J8M3 183 aa5.91□□□□□ -1.46
MTHFD1-216ENST00000557539 TTC38Q5R3I4 469 aa5.91□□□□□ -1.46
MTHFD1-216ENST00000557539 WDR78Q5VTH9 848 aa5.91□□□□□ -1.46
MTHFD1-216ENST00000557539 PRAMEF9Q5VWM5 478 aa5.91□□□□□ -1.46
MTHFD1-216ENST00000557539 CLEC4GQ6UXB4 293 aa5.91□□□□□ -1.46
MTHFD1-216ENST00000557539 SLCO6A1Q86UG4 719 aa5.91□□□□□ -1.46
MTHFD1-216ENST00000557539 TSPEARQ8WU66 669 aa5.91□□□□□ -1.46
MTHFD1-216ENST00000557539 RIPOR3Q96MK2 946 aa5.91□□□□□ -1.46
MTHFD1-216ENST00000557539 UHRF1Q96T88 793 aaPredicted RBP5.91□□□□□ -1.46
MTHFD1-216ENST00000557539 CGRRF1Q99675 332 aa5.91□□□□□ -1.46
MTHFD1-216ENST00000557539 CRB3Q9BUF7 120 aa5.91□□□□□ -1.46
MTHFD1-216ENST00000557539 WNT8AQ9H1J5 351 aa5.91□□□□□ -1.46
MTHFD1-216ENST00000557539 NUP62CLQ9H1M0 184 aa5.91□□□□□ -1.46
MTHFD1-216ENST00000557539 IMPACTQ9P2X3 320 aa5.91□□□□□ -1.46
MTHFD1-216ENST00000557539 ASH2LQ9UBL3 628 aa5.91□□□□□ -1.46
MTHFD1-216ENST00000557539 STAP2Q9UGK3 403 aa5.91□□□□□ -1.46
MTHFD1-216ENST00000557539 CCNL1Q9UK58 526 aaPredicted RBP5.91□□□□□ -1.46
MTHFD1-216ENST00000557539 QRICH2Q9H0J4 1663 aa5.91□□□□□ -1.46
MTHFD1-216ENST00000557539 KANK1Q14678 1352 aa5.91□□□□□ -1.46
MTHFD1-216ENST00000557539 GCN1Q92616 2671 aaKnown RBP5.91□□□□□ -1.46
MTHFD1-216ENST00000557539 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.9□□□□□ -1.46
MTHFD1-216ENST00000557539 RASA4BC9J798 803 aa5.9□□□□□ -1.46
MTHFD1-216ENST00000557539 RASA4O43374 803 aa5.9□□□□□ -1.46
MTHFD1-216ENST00000557539 HTRA2O43464 458 aaPredicted RBP5.9□□□□□ -1.46
MTHFD1-216ENST00000557539 MGEA5O60502 916 aa5.9□□□□□ -1.46
MTHFD1-216ENST00000557539 TADA3O75528 432 aa5.9□□□□□ -1.46
MTHFD1-216ENST00000557539 SARSP49591 514 aaKnown RBP5.9□□□□□ -1.46
MTHFD1-216ENST00000557539 CORO7P57737 925 aa5.9□□□□□ -1.46
MTHFD1-216ENST00000557539 RTP1P59025 263 aa5.9□□□□□ -1.46
MTHFD1-216ENST00000557539 GRIN1Q05586 938 aa5.9□□□□□ -1.46
MTHFD1-216ENST00000557539 BNIP3Q12983 259 aa5.9□□□□□ -1.46
MTHFD1-216ENST00000557539 TRIM25Q14258 630 aaKnown RBP5.9□□□□□ -1.46
MTHFD1-216ENST00000557539 ANO6Q4KMQ2 910 aa5.9□□□□□ -1.46
MTHFD1-216ENST00000557539 PAN2Q504Q3 1202 aaKnown RBP5.9□□□□□ -1.46
MTHFD1-216ENST00000557539 UNQ6494/PRO21346Q6UXR6 183 aa5.9□□□□□ -1.46
MTHFD1-216ENST00000557539 DAAM2Q86T65 1068 aa5.9□□□□□ -1.46
MTHFD1-216ENST00000557539 RTN4RL1Q86UN2 441 aaPredicted RBP5.9□□□□□ -1.46
MTHFD1-216ENST00000557539 CILP2Q8IUL8 1156 aa5.9□□□□□ -1.46
MTHFD1-216ENST00000557539 DEPTORQ8TB45 409 aa5.9□□□□□ -1.46
MTHFD1-216ENST00000557539 NRG4Q8WWG1 115 aa5.9□□□□□ -1.46
MTHFD1-216ENST00000557539 CLEC4DQ8WXI8 215 aa5.9□□□□□ -1.46
MTHFD1-216ENST00000557539 LRTOMTQ8WZ04 291 aa5.9□□□□□ -1.46
MTHFD1-216ENST00000557539 FOXRED1Q96CU9 486 aaPredicted RBP5.9□□□□□ -1.46
MTHFD1-216ENST00000557539 MAML3Q96JK9 1138 aa5.9□□□□□ -1.46
MTHFD1-216ENST00000557539 G6PC3Q9BUM1 346 aa5.9□□□□□ -1.46
MTHFD1-216ENST00000557539 TMPRSS11EQ9UL52 423 aa5.9□□□□□ -1.46
MTHFD1-216ENST00000557539 GTF2A1LQ9UNN4 478 aa5.9□□□□□ -1.46
MTHFD1-216ENST00000557539 LRCH1Q9Y2L9 728 aa5.9□□□□□ -1.46
MTHFD1-216ENST00000557539 PCDHB4Q9Y5E5 795 aa5.9□□□□□ -1.46
MTHFD1-216ENST00000557539 SNX11Q9Y5W9 270 aa5.9□□□□□ -1.46
MTHFD1-216ENST00000557539 ACEP12821 1306 aa5.9□□□□□ -1.47
MTHFD1-216ENST00000557539 BRCA1P38398 1863 aaKnown RBP5.9□□□□□ -1.47
MTHFD1-216ENST00000557539 CLTCL1P53675 1640 aa5.89□□□□□ -1.47
MTHFD1-216ENST00000557539 A0A1W2PQJ5 194 aa5.89□□□□□ -1.47
MTHFD1-216ENST00000557539 PRAMEF22A3QJZ6 481 aa5.89□□□□□ -1.47
MTHFD1-216ENST00000557539 CFAP69A5D8W1 941 aa5.89□□□□□ -1.47
MTHFD1-216ENST00000557539 ACOT7O00154 380 aa5.89□□□□□ -1.47
MTHFD1-216ENST00000557539 MSL3P1P0C860 447 aa5.89□□□□□ -1.47
MTHFD1-216ENST00000557539 EDNRBP24530 442 aa5.89□□□□□ -1.47
MTHFD1-216ENST00000557539 PIK3CBP42338 1070 aa5.89□□□□□ -1.47
MTHFD1-216ENST00000557539 PRIM2P49643 509 aa5.89□□□□□ -1.47
MTHFD1-216ENST00000557539 SLC6A3Q01959 620 aa5.89□□□□□ -1.47
MTHFD1-216ENST00000557539 ADCY2Q08462 1091 aa5.89□□□□□ -1.47
MTHFD1-216ENST00000557539 FOXD4Q12950 439 aaPredicted RBP5.89□□□□□ -1.47
MTHFD1-216ENST00000557539 SPIDRQ14159 915 aa5.89□□□□□ -1.47
MTHFD1-216ENST00000557539 MYBPC3Q14896 1274 aa5.89□□□□□ -1.47
MTHFD1-216ENST00000557539 C3orf36Q3SXR2 165 aa5.89□□□□□ -1.47
MTHFD1-216ENST00000557539 LRIT3Q3SXY7 679 aa5.89□□□□□ -1.47
MTHFD1-216ENST00000557539 PRAMEF18Q5VWM3 479 aa5.89□□□□□ -1.47
MTHFD1-216ENST00000557539 KIAA1841Q6NSI8 718 aa5.89□□□□□ -1.47
MTHFD1-216ENST00000557539 CCDC70Q6NSX1 233 aa5.89□□□□□ -1.47
MTHFD1-216ENST00000557539 SWSAP1Q6NVH7 229 aa5.89□□□□□ -1.47
MTHFD1-216ENST00000557539 CCDC174Q6PII3 467 aa5.89□□□□□ -1.47
MTHFD1-216ENST00000557539 CEP128Q6ZU80 1094 aa5.89□□□□□ -1.47
MTHFD1-216ENST00000557539 TOM1L2Q6ZVM7 507 aa5.89□□□□□ -1.47
MTHFD1-216ENST00000557539 LYSMD2Q8IV50 215 aa5.89□□□□□ -1.47
MTHFD1-216ENST00000557539 TRIM48Q8IWZ4 208 aa5.89□□□□□ -1.47
MTHFD1-216ENST00000557539 PHOSPHO1Q8TCT1 267 aa5.89□□□□□ -1.47
MTHFD1-216ENST00000557539 NETO1Q8TDF5 533 aa5.89□□□□□ -1.47
MTHFD1-216ENST00000557539 VPS11Q9H270 941 aa5.89□□□□□ -1.47
MTHFD1-216ENST00000557539 ARFGAP3Q9NP61 516 aa5.89□□□□□ -1.47
MTHFD1-216ENST00000557539 PDLIM7Q9NR12 457 aa5.89□□□□□ -1.47
MTHFD1-216ENST00000557539 EBF1Q9UH73 591 aa5.89□□□□□ -1.47
MTHFD1-216ENST00000557539 SIT1Q9Y3P8 196 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms